==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 16-FEB-04 1SE7 . COMPND 2 MOLECULE: HOMOLOGUE OF THE THETA SUBUNIT OF DNA POLYMERASE . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P1; . AUTHOR E.F.DEROSE,T.W.KIRBY,G.A.MUELLER,A.K.CHIKOVA,R.M.SCHAAPER, . 83 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6535.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 66.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 45.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 172 0, 0.0 35,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -2.8 -4.4 13.4 4.1 2 2 A Y - 0 0 189 2,-0.0 35,-0.1 0, 0.0 38,-0.0 -0.050 360.0 -14.4 56.7-163.8 -1.3 13.4 1.9 3 3 A D + 0 0 73 1,-0.1 38,-0.0 2,-0.1 15,-0.0 -0.112 51.5 170.9 -63.1 165.2 1.5 10.9 2.7 4 4 A W + 0 0 167 0, 0.0 3,-0.5 0, 0.0 2,-0.3 0.369 64.1 79.1-148.9 -21.8 1.6 9.0 6.1 5 5 A N > + 0 0 33 1,-0.2 3,-1.6 2,-0.1 13,-0.1 -0.130 51.1 127.9 -88.1 38.1 4.4 6.5 5.5 6 6 A I T 3 + 0 0 119 -2,-0.3 -1,-0.2 1,-0.3 8,-0.1 0.660 52.5 83.7 -68.1 -14.8 7.0 9.1 6.1 7 7 A A T 3 + 0 0 84 -3,-0.5 2,-0.8 2,-0.0 -1,-0.3 0.648 67.0 100.8 -63.3 -14.1 8.5 6.7 8.7 8 8 A A < + 0 0 23 -3,-1.6 -1,-0.0 1,-0.2 -3,-0.0 -0.655 40.7 163.3 -78.8 107.7 10.3 5.1 5.8 9 9 A K + 0 0 177 -2,-0.8 -1,-0.2 5,-0.0 -2,-0.0 0.913 53.3 71.8 -88.8 -53.6 13.9 6.3 5.7 10 10 A S S > S- 0 0 59 1,-0.1 4,-1.5 2,-0.0 5,-0.1 -0.117 81.1-127.4 -60.0 161.9 15.5 3.7 3.5 11 11 A Q H > S+ 0 0 105 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.935 107.2 48.3 -78.0 -50.1 14.8 3.7 -0.3 12 12 A E H > S+ 0 0 109 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.812 114.2 49.7 -60.8 -30.9 13.8 0.1 -0.6 13 13 A E H > S+ 0 0 123 2,-0.2 4,-1.6 1,-0.1 5,-0.2 0.946 112.5 43.4 -74.1 -50.1 11.5 0.4 2.4 14 14 A R H X S+ 0 0 106 -4,-1.5 4,-2.7 1,-0.2 5,-0.2 0.877 112.7 53.6 -64.5 -39.8 9.7 3.6 1.3 15 15 A D H X S+ 0 0 36 -4,-2.4 4,-1.8 2,-0.2 5,-0.2 0.946 109.3 45.7 -62.3 -51.0 9.2 2.4 -2.3 16 16 A K H X S+ 0 0 88 -4,-1.3 4,-0.9 -5,-0.2 -1,-0.2 0.871 119.0 42.5 -62.3 -37.0 7.6 -0.9 -1.5 17 17 A V H X S+ 0 0 38 -4,-1.6 4,-3.3 2,-0.2 5,-0.3 0.854 108.1 58.5 -78.5 -36.4 5.3 0.7 1.0 18 18 A N H X S+ 0 0 33 -4,-2.7 4,-0.8 1,-0.2 -2,-0.2 0.869 114.2 39.2 -59.4 -36.4 4.5 3.7 -1.2 19 19 A V H X S+ 0 0 0 -4,-1.8 4,-1.9 -5,-0.2 -1,-0.2 0.711 113.0 58.2 -83.7 -23.2 3.2 1.3 -3.8 20 20 A D H X S+ 0 0 25 -4,-0.9 4,-1.0 -5,-0.2 -2,-0.2 0.920 108.9 42.5 -70.7 -46.1 1.7 -0.8 -1.0 21 21 A L H X S+ 0 0 15 -4,-3.3 4,-2.6 1,-0.2 -1,-0.2 0.790 110.1 61.1 -70.0 -27.9 -0.5 2.0 0.2 22 22 A A H X S+ 0 0 0 -4,-0.8 4,-2.3 -5,-0.3 -2,-0.2 0.938 101.1 50.3 -62.8 -49.2 -1.2 2.8 -3.4 23 23 A A H X>S+ 0 0 0 -4,-1.9 4,-1.5 1,-0.2 5,-0.6 0.797 111.2 53.4 -59.3 -28.9 -2.8 -0.5 -4.0 24 24 A S H X>S+ 0 0 20 -4,-1.0 5,-1.1 2,-0.2 4,-0.8 0.971 108.2 44.8 -71.9 -55.4 -4.9 0.2 -0.9 25 25 A G H X5S+ 0 0 3 -4,-2.6 4,-0.8 3,-0.2 5,-0.4 0.912 111.7 54.7 -57.1 -44.3 -6.3 3.5 -1.9 26 26 A V H X5S+ 0 0 56 -4,-2.3 4,-0.6 12,-0.2 -1,-0.2 0.958 130.5 7.0 -54.7 -61.3 -7.1 2.4 -5.4 27 27 A A H X5S+ 0 0 15 -4,-1.5 4,-2.7 -5,-0.2 3,-0.3 0.937 125.8 57.2 -89.4 -56.9 -9.2 -0.7 -4.5 28 28 A Y H XXS+ 0 0 44 -4,-0.8 4,-1.3 -5,-0.6 6,-0.9 0.816 111.4 46.7 -45.9 -38.7 -9.7 -0.6 -0.7 29 29 A K H < - 0 0 87 -2,-0.3 4,-0.9 1,-0.1 -11,-0.1 -0.843 15.3-155.4-101.0 127.9 -7.6 9.5 -2.9 38 38 A A H >> S+ 0 0 37 -2,-0.5 4,-1.0 1,-0.2 3,-0.5 0.889 97.0 47.0 -65.3 -42.8 -6.9 7.0 -5.7 39 39 A E H 3> S+ 0 0 155 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.705 99.8 70.7 -74.0 -18.8 -5.0 9.5 -8.0 40 40 A Q H 34 S+ 0 0 51 1,-0.2 -1,-0.2 2,-0.2 -2,-0.2 0.879 107.6 35.5 -62.8 -38.1 -3.0 10.7 -4.9 41 41 A V H X< S+ 0 0 8 -4,-0.9 3,-0.8 -3,-0.5 -1,-0.2 0.667 106.0 71.6 -87.6 -20.2 -1.2 7.3 -4.9 42 42 A A H 3< S+ 0 0 63 -4,-1.0 3,-0.4 1,-0.2 -2,-0.2 0.788 98.4 48.1 -66.4 -28.8 -1.2 7.1 -8.7 43 43 A R T 3< S+ 0 0 197 -4,-1.1 -1,-0.2 1,-0.2 -2,-0.2 0.534 116.4 43.2 -89.5 -7.9 1.3 9.9 -9.0 44 44 A E S < S+ 0 0 28 -3,-0.8 -1,-0.2 -4,-0.1 -2,-0.2 0.143 80.0 124.5-121.5 17.1 3.6 8.3 -6.4 45 45 A Q - 0 0 69 -3,-0.4 2,-0.5 -4,-0.2 -26,-0.1 -0.710 56.2-140.7 -84.5 108.2 3.4 4.7 -7.6 46 46 A P > - 0 0 22 0, 0.0 3,-2.3 0, 0.0 -2,-0.1 -0.574 2.3-152.5 -72.9 115.3 7.0 3.4 -8.2 47 47 A E G > S+ 0 0 148 -2,-0.5 3,-0.8 1,-0.3 4,-0.2 0.655 93.0 72.8 -60.0 -14.9 6.9 1.2 -11.3 48 48 A N G 3 S+ 0 0 138 1,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.702 106.5 33.9 -73.5 -19.9 9.9 -0.6 -9.7 49 49 A L G <> S+ 0 0 29 -3,-2.3 4,-2.3 -34,-0.1 3,-0.4 0.083 78.3 122.0-120.2 19.2 7.5 -2.1 -7.2 50 50 A R H <> S+ 0 0 161 -3,-0.8 4,-1.0 1,-0.3 -2,-0.1 0.747 75.4 57.9 -53.7 -23.6 4.6 -2.4 -9.7 51 51 A T H > S+ 0 0 102 -4,-0.2 4,-1.5 2,-0.2 -1,-0.3 0.934 106.5 44.2 -72.7 -48.8 4.8 -6.1 -8.8 52 52 A Y H >> S+ 0 0 55 -3,-0.4 4,-2.4 1,-0.2 3,-0.7 0.955 108.3 57.0 -60.6 -54.6 4.3 -5.7 -5.1 53 53 A F H 3X S+ 0 0 27 -4,-2.3 4,-2.3 1,-0.3 -1,-0.2 0.846 108.5 48.9 -45.2 -40.2 1.4 -3.2 -5.5 54 54 A M H 3X S+ 0 0 111 -4,-1.0 4,-3.1 -5,-0.3 5,-0.3 0.850 107.3 55.2 -71.4 -35.1 -0.4 -5.8 -7.5 55 55 A E H X S+ 0 0 71 -4,-1.5 4,-1.6 -5,-0.3 3,-0.7 0.945 103.4 57.2 -64.4 -49.7 -5.2 -9.4 -1.8 60 60 A Y H 3X S+ 0 0 27 -4,-3.3 4,-1.3 1,-0.3 -1,-0.2 0.808 102.2 58.1 -50.9 -33.3 -7.1 -6.3 -1.0 61 61 A R H 3X S+ 0 0 174 -4,-1.6 4,-1.3 2,-0.2 -1,-0.3 0.911 100.7 54.6 -65.2 -42.8 -9.8 -7.6 -3.4 62 62 A Q H S- 0 0 46 0, 0.0 3,-0.9 0, 0.0 7,-0.0 0.430 82.2 -19.1 -58.8-156.5 -17.3 -4.3 6.2 69 69 A K T 3 S+ 0 0 138 1,-0.2 -2,-0.0 2,-0.1 14,-0.0 0.111 106.7 67.1 -45.6 163.7 -20.0 -2.3 4.3 70 70 A G T 3 S+ 0 0 56 2,-0.1 -1,-0.2 -37,-0.1 -38,-0.1 -0.214 120.6 1.6 112.8 -41.5 -19.4 -1.3 0.7 71 71 A S S < S+ 0 0 44 -3,-0.9 -4,-0.1 -4,-0.2 -2,-0.1 -0.281 83.5 128.1-178.6 80.0 -19.4 -4.7 -0.8 72 72 A D + 0 0 21 11,-0.2 3,-0.5 1,-0.1 11,-0.1 -0.782 12.9 163.3-149.3 100.6 -20.1 -7.7 1.5 73 73 A P S S+ 0 0 94 0, 0.0 3,-0.3 0, 0.0 10,-0.2 0.829 83.7 50.8 -80.9 -37.3 -22.8 -10.4 0.7 74 74 A A S S+ 0 0 76 1,-0.2 -8,-0.0 -9,-0.2 -9,-0.0 0.017 80.3 98.2 -92.7 27.1 -21.4 -13.0 3.1 75 75 A Y + 0 0 112 -3,-0.5 -1,-0.2 8,-0.2 -6,-0.0 0.080 54.5 143.9-100.2 22.9 -21.2 -10.6 6.0 76 76 A Q - 0 0 84 -3,-0.3 2,-0.4 7,-0.2 6,-0.2 0.026 44.3-127.1 -55.6 168.2 -24.5 -11.9 7.4 77 77 A K B >> S-A 81 0A 107 4,-1.7 3,-2.0 1,-0.1 4,-0.9 -0.965 79.9 -2.2-126.6 141.0 -25.1 -12.2 11.2 78 78 A D T 34 S- 0 0 144 -2,-0.4 -1,-0.1 1,-0.3 -2,-0.0 0.594 108.1 -93.2 59.0 8.4 -26.2 -15.2 13.2 79 79 A D T 34 S+ 0 0 138 2,-0.2 -1,-0.3 1,-0.1 3,-0.1 0.687 112.1 100.3 59.1 18.3 -26.4 -16.9 9.8 80 80 A A T <4 S+ 0 0 85 -3,-2.0 2,-0.3 1,-0.3 -2,-0.2 0.900 83.5 13.3 -94.7 -64.8 -30.1 -15.8 9.8 81 81 A V B < S-A 77 0A 62 -4,-0.9 -4,-1.7 0, 0.0 2,-0.4 -0.886 72.4-127.1-118.2 148.9 -30.3 -12.6 7.6 82 82 A K 0 0 142 -2,-0.3 -8,-0.1 -6,-0.2 -6,-0.1 -0.766 360.0 360.0 -96.8 138.1 -27.7 -11.2 5.2 83 83 A K 0 0 183 -2,-0.4 -8,-0.2 -10,-0.2 -11,-0.2 -0.118 360.0 360.0-167.5 360.0 -26.6 -7.5 5.5