==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-DEC-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 10-JUN-11 3SEL . COMPND 2 MOLECULE: CYTOCHROME C7; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; . AUTHOR P.R.POKKULURI,M.SCHIFFER . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6461.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 59.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 8.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 25.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X A 0 0 150 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 168.0 35.4 20.2 19.8 2 2 X D - 0 0 152 1,-0.1 2,-0.0 15,-0.0 0, 0.0 -0.618 360.0-103.5 -95.2 152.0 31.7 19.6 19.5 3 3 X D - 0 0 98 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 -0.256 39.1-129.2 -57.9 155.7 29.1 21.5 17.6 4 4 X I E -A 15 0A 108 11,-1.0 11,-2.4 -2,-0.0 2,-0.4 -0.826 10.0-151.2-114.8 153.5 26.8 23.8 19.6 5 5 X V E -A 14 0A 61 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.993 13.1-142.0-123.0 128.1 23.0 24.1 19.8 6 6 X L E -A 13 0A 59 7,-2.7 7,-2.1 -2,-0.4 2,-1.8 -0.826 18.9-133.8 -90.3 127.5 21.5 27.5 20.6 7 7 X K + 0 0 160 -2,-0.5 5,-0.2 5,-0.2 2,-0.1 -0.302 33.7 173.7 -88.0 59.8 18.5 26.8 22.8 8 8 X A > - 0 0 34 -2,-1.8 3,-1.8 3,-0.3 -2,-0.0 -0.408 36.3-129.6 -62.7 134.4 15.9 29.1 21.1 9 9 X K T 3 S+ 0 0 212 1,-0.3 3,-0.2 -2,-0.1 -1,-0.1 0.844 107.1 54.7 -56.9 -38.1 12.4 28.5 22.7 10 10 X N T 3 S- 0 0 99 1,-0.3 -1,-0.3 60,-0.0 61,-0.2 0.575 132.0 -36.8 -72.1 -12.2 10.8 28.1 19.3 11 11 X G < - 0 0 3 -3,-1.8 -3,-0.3 59,-0.1 -1,-0.3 -0.393 69.3 -84.7 151.6 134.2 13.3 25.3 18.4 12 12 X D - 0 0 49 58,-0.5 58,-2.2 57,-0.2 2,-0.6 -0.148 37.3-146.9 -50.4 137.9 16.9 24.3 18.8 13 13 X V E -AB 6 69A 22 -7,-2.1 -7,-2.7 56,-0.2 2,-0.3 -0.957 9.6-147.7-116.7 113.8 19.3 25.8 16.3 14 14 X K E -A 5 0A 164 54,-0.6 -9,-0.2 -2,-0.6 -11,-0.0 -0.575 5.1-159.4 -75.6 138.8 22.3 23.6 15.3 15 15 X F E -A 4 0A 74 -11,-2.4 -11,-1.0 -2,-0.3 2,-0.8 -0.924 7.7-162.8-117.2 98.2 25.6 25.2 14.4 16 16 X P > - 0 0 54 0, 0.0 4,-1.1 0, 0.0 -14,-0.0 -0.742 2.6-168.7 -82.9 106.5 27.7 22.7 12.4 17 17 X H H > S+ 0 0 69 -2,-0.8 4,-2.7 1,-0.2 3,-0.3 0.888 78.6 59.3 -66.8 -41.5 31.2 24.0 12.5 18 18 X K H > S+ 0 0 157 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.934 104.4 51.3 -55.7 -46.1 32.8 21.7 9.8 19 19 X A H > S+ 0 0 56 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.852 113.0 47.1 -55.6 -38.7 30.4 23.0 7.1 20 20 X H H X S+ 0 0 53 -4,-1.1 4,-2.6 -3,-0.3 -2,-0.2 0.900 108.5 51.9 -73.4 -43.8 31.4 26.5 8.1 21 21 X Q H < S+ 0 0 121 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.930 116.7 43.1 -54.1 -45.1 35.1 25.9 8.1 22 22 X K H < S+ 0 0 166 -4,-2.4 -2,-0.2 -5,-0.2 -1,-0.2 0.908 121.0 37.6 -66.0 -48.2 34.7 24.4 4.6 23 23 X A H < S+ 0 0 63 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.698 121.9 41.3 -86.1 -19.1 32.4 27.1 3.2 24 24 X V < + 0 0 41 -4,-2.6 -1,-0.2 -5,-0.1 5,-0.2 -0.664 61.7 167.7-129.1 71.2 33.8 30.2 4.8 25 25 X P + 0 0 101 0, 0.0 2,-1.9 0, 0.0 3,-0.1 0.755 59.5 90.6 -61.2 -22.4 37.6 29.7 4.6 26 26 X D > - 0 0 83 1,-0.2 3,-2.2 -3,-0.1 4,-0.3 -0.536 63.1-174.9 -70.0 86.6 38.0 33.3 5.6 27 27 X C G >> S+ 0 0 77 -2,-1.9 4,-2.9 1,-0.3 3,-2.2 0.770 71.1 74.1 -60.1 -29.8 38.2 32.4 9.3 28 28 X K G 34 S+ 0 0 128 1,-0.3 -1,-0.3 2,-0.2 -2,-0.1 0.580 74.9 79.9 -66.0 -10.3 38.2 36.0 10.4 29 29 X K G <4 S+ 0 0 121 -3,-2.2 -1,-0.3 -5,-0.2 -2,-0.2 0.845 120.8 6.2 -60.2 -30.0 34.5 36.3 9.5 30 30 X C T <4 S+ 0 0 89 -3,-2.2 3,-0.4 -4,-0.3 -2,-0.2 0.717 121.8 67.7-121.7 -31.3 34.0 34.7 12.9 31 31 X H S < S+ 0 0 106 -4,-2.9 3,-0.1 1,-0.2 -1,-0.0 -0.581 92.4 26.3-101.0 158.1 37.4 34.3 14.7 32 32 X E S S+ 0 0 168 1,-0.2 2,-0.2 -2,-0.2 -1,-0.2 0.868 79.7 155.1 58.4 35.9 39.7 37.0 16.2 33 33 X K - 0 0 95 -3,-0.4 -1,-0.2 1,-0.2 3,-0.1 -0.618 49.4 -96.9 -84.6 153.4 36.8 39.3 16.6 34 34 X G > - 0 0 46 -2,-0.2 3,-0.9 1,-0.1 -1,-0.2 -0.047 56.0 -64.3 -63.1 175.6 37.3 41.8 19.3 35 35 X P T 3 S+ 0 0 142 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.178 112.1 45.3 -59.7 147.1 36.0 41.4 22.9 36 36 X G T 3> S+ 0 0 39 -3,-0.1 4,-1.8 5,-0.0 5,-0.1 0.351 71.1 113.6 103.9 -4.7 32.3 41.3 23.5 37 37 X K H <> S+ 0 0 98 -3,-0.9 4,-0.7 2,-0.2 -3,-0.0 0.773 78.2 50.4 -76.2 -25.1 31.2 38.9 20.8 38 38 X I H >4 S+ 0 0 165 2,-0.2 3,-0.5 1,-0.2 -1,-0.2 0.927 117.5 39.7 -71.5 -46.5 30.2 36.1 23.3 39 39 X E H 34 S+ 0 0 182 1,-0.2 -2,-0.2 3,-0.0 -1,-0.2 0.775 112.5 60.1 -70.7 -23.3 28.1 38.6 25.3 40 40 X G H 3< S+ 0 0 49 -4,-1.8 5,-0.3 2,-0.0 -1,-0.2 0.692 77.9 102.3 -83.4 -18.4 26.8 40.3 22.1 41 41 X F << + 0 0 85 -4,-0.7 2,-0.3 -3,-0.5 3,-0.0 -0.391 43.4 120.1 -76.2 143.3 25.2 37.4 20.4 42 42 X G S > S- 0 0 32 -2,-0.1 4,-2.9 1,-0.1 5,-0.2 -0.908 75.7 -55.3-174.4-164.7 21.4 37.1 20.5 43 43 X K H > S+ 0 0 158 -2,-0.3 4,-2.5 2,-0.2 5,-0.2 0.904 128.6 52.4 -66.8 -40.7 18.3 37.0 18.4 44 44 X E H > S+ 0 0 89 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.944 114.0 42.8 -60.8 -48.4 19.1 40.3 16.6 45 45 X M H >4>S+ 0 0 55 -5,-0.3 5,-1.7 1,-0.2 6,-0.9 0.947 114.1 51.5 -62.8 -46.3 22.5 39.1 15.7 46 46 X A H 3<5S+ 0 0 18 -4,-2.9 6,-3.1 4,-0.3 5,-0.4 0.877 114.8 40.8 -58.9 -42.6 21.3 35.6 14.7 47 47 X H H 3<5S+ 0 0 94 -4,-2.5 -1,-0.3 4,-0.2 -2,-0.2 0.570 125.2 43.5 -84.4 -11.6 18.6 36.9 12.4 48 48 X G T X<>S- 0 0 27 -4,-1.0 5,-3.0 -3,-0.7 3,-1.4 0.068 130.3 -36.5-104.1-138.8 21.0 39.6 11.2 49 49 X K T 3 5S+ 0 0 137 1,-0.3 5,-0.3 4,-0.2 -3,-0.1 0.716 123.1 75.6 -67.3 -19.7 24.7 39.3 10.2 50 50 X G T 3 5S+ 0 0 35 -3,-1.4 4,-1.8 -6,-0.9 -4,-0.2 0.302 136.2 42.1-141.8 -68.2 23.7 33.9 11.0 52 52 X K H >5S+ 0 0 77 -6,-3.1 4,-2.1 1,-0.2 -3,-0.2 0.904 111.0 54.1 -63.0 -46.8 20.9 34.7 8.6 53 53 X G H > S+ 0 0 47 -6,-0.6 4,-2.3 -5,-0.3 -1,-0.2 0.937 108.7 52.0 -63.3 -41.0 25.6 35.9 6.1 55 55 X H H X>S+ 0 0 28 -4,-1.8 5,-1.5 1,-0.2 4,-0.9 0.890 110.5 49.9 -57.6 -40.0 23.6 33.1 4.5 56 56 X E H <5S+ 0 0 98 -4,-2.1 -2,-0.2 2,-0.2 -1,-0.2 0.899 112.3 44.6 -68.1 -45.0 21.7 35.8 2.4 57 57 X E H <5S+ 0 0 143 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.876 115.7 47.1 -65.4 -40.1 24.9 37.5 1.2 58 58 X N H <5S- 0 0 88 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.661 104.7-132.2 -76.5 -15.8 26.7 34.2 0.4 59 59 X K T <5S+ 0 0 178 -4,-0.9 2,-0.3 -5,-0.2 -3,-0.2 0.734 77.9 83.0 65.7 25.8 23.5 33.0 -1.4 60 60 X K < + 0 0 157 -5,-1.5 -2,-0.2 -6,-0.2 -1,-0.1 -0.954 58.7 56.1-158.8 142.2 23.8 29.7 0.5 61 61 X G S S- 0 0 36 -2,-0.3 2,-0.1 -3,-0.1 6,-0.0 -0.314 89.7 -45.8 113.6 159.5 22.7 28.4 3.9 62 62 X P + 0 0 46 0, 0.0 -7,-0.2 0, 0.0 -6,-0.1 -0.348 51.5 159.4 -65.2 129.1 19.4 28.3 5.8 63 63 X T + 0 0 34 -8,-0.1 2,-0.3 -2,-0.1 -11,-0.0 0.363 49.3 85.9-125.7 -0.7 17.3 31.4 5.7 64 64 X K S >> S- 0 0 133 1,-0.1 3,-1.6 -12,-0.0 4,-1.1 -0.796 84.3-113.6-101.7 152.3 13.8 30.1 6.6 65 65 X C H >> S+ 0 0 105 -2,-0.3 4,-2.9 1,-0.3 3,-1.0 0.875 115.1 43.9 -45.5 -53.4 12.5 29.6 10.1 66 66 X G H 34 S+ 0 0 61 1,-0.3 -1,-0.3 2,-0.2 0, 0.0 0.566 103.2 66.2 -79.9 -11.8 12.3 25.9 9.9 67 67 X E H <4 S+ 0 0 116 -3,-1.6 -1,-0.3 1,-0.1 -2,-0.2 0.735 117.9 23.9 -77.2 -27.0 15.6 25.5 8.2 68 68 X C H << S+ 0 0 37 -4,-1.1 -54,-0.6 -3,-1.0 2,-0.5 0.813 118.9 61.0 -96.1 -46.1 17.4 26.8 11.4 69 69 X H B < +B 13 0A 31 -4,-2.9 2,-0.3 -5,-0.3 -56,-0.2 -0.775 59.3 161.7 -92.3 124.3 14.9 26.0 14.1 70 70 X K 0 0 149 -58,-2.2 -58,-0.5 -2,-0.5 -59,-0.1 -0.936 360.0 360.0-146.2 120.8 14.0 22.4 14.7 71 71 X K 0 0 212 -2,-0.3 -1,-0.1 -60,-0.2 -60,-0.1 0.908 360.0 360.0 -68.4 360.0 12.4 20.8 17.8