==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-DEC-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 20-JUN-11 3SJ1 . COMPND 2 MOLECULE: CYTOCHROME C7; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; . AUTHOR P.R.POKKULURI,M.SCHIFFER . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6499.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 62.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 9.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 25.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X A 0 0 154 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 163.0 35.3 20.2 19.8 2 2 X D - 0 0 151 1,-0.1 0, 0.0 15,-0.0 0, 0.0 -0.471 360.0-102.3 -89.2 156.3 31.6 19.5 19.4 3 3 X D - 0 0 76 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 -0.266 40.0-132.3 -63.4 159.0 29.0 21.4 17.5 4 4 X I E -A 15 0A 92 11,-1.0 11,-2.4 2,-0.0 2,-0.4 -0.875 8.4-147.7-121.6 156.0 26.7 23.6 19.6 5 5 X V E -A 14 0A 62 -2,-0.3 2,-0.6 9,-0.2 9,-0.2 -0.977 12.7-140.6-119.6 130.3 23.0 24.1 19.7 6 6 X L E -A 13 0A 63 7,-2.7 7,-2.2 -2,-0.4 2,-2.2 -0.848 20.3-134.0 -90.5 125.2 21.4 27.4 20.5 7 7 X K + 0 0 159 -2,-0.6 2,-0.2 5,-0.2 5,-0.2 -0.358 33.5 175.2 -85.0 65.7 18.4 26.7 22.8 8 8 X A > - 0 0 30 -2,-2.2 3,-1.8 3,-0.3 -2,-0.0 -0.510 35.3-130.0 -71.3 133.9 15.9 29.0 21.1 9 9 X K T 3 S+ 0 0 216 1,-0.3 3,-0.2 -2,-0.2 -1,-0.1 0.824 107.1 53.4 -53.2 -39.3 12.4 28.5 22.6 10 10 X N T 3 S- 0 0 101 1,-0.3 -1,-0.3 61,-0.0 61,-0.2 0.552 132.8 -35.9 -75.9 -11.4 10.8 28.0 19.2 11 11 X G S < S- 0 0 3 -3,-1.8 -3,-0.3 59,-0.1 -1,-0.3 -0.416 70.2 -84.9 154.8 135.8 13.2 25.3 18.3 12 12 X D E - B 0 70A 49 58,-0.6 58,-2.4 57,-0.2 2,-0.5 -0.181 36.6-146.3 -52.0 142.2 16.9 24.3 18.8 13 13 X V E -AB 6 69A 25 -7,-2.2 -7,-2.7 56,-0.2 2,-0.3 -0.955 9.2-150.8-116.9 111.5 19.3 25.8 16.3 14 14 X K E -A 5 0A 152 54,-0.6 -9,-0.2 -2,-0.5 -11,-0.0 -0.607 2.7-158.1 -79.7 140.8 22.3 23.6 15.3 15 15 X F E -A 4 0A 74 -11,-2.4 -11,-1.0 -2,-0.3 2,-0.9 -0.958 7.8-159.3-118.4 102.6 25.5 25.2 14.3 16 16 X P > - 0 0 55 0, 0.0 4,-1.1 0, 0.0 3,-0.1 -0.774 5.1-169.6 -87.1 105.9 27.6 22.8 12.2 17 17 X H H >> S+ 0 0 68 -2,-0.9 4,-2.6 1,-0.2 3,-0.5 0.908 78.2 60.1 -65.1 -46.0 31.2 23.9 12.4 18 18 X K H 3> S+ 0 0 160 1,-0.3 4,-2.2 2,-0.2 -1,-0.2 0.900 104.8 50.0 -47.6 -50.3 32.7 21.6 9.7 19 19 X A H 3> S+ 0 0 54 1,-0.2 4,-2.7 2,-0.2 -1,-0.3 0.866 112.7 47.9 -59.0 -38.2 30.4 23.1 7.0 20 20 X H H - 0 0 84 1,-0.2 3,-1.9 -3,-0.1 4,-0.2 -0.621 63.4-175.0 -71.2 88.7 38.0 33.3 5.5 27 27 X C G >> S+ 0 0 77 -2,-1.6 4,-2.8 1,-0.3 3,-1.8 0.739 70.7 72.3 -64.6 -27.5 38.1 32.4 9.3 28 28 X K G 34 S+ 0 0 126 1,-0.3 -1,-0.3 2,-0.2 -2,-0.1 0.545 74.5 81.6 -71.4 -6.0 38.2 36.1 10.4 29 29 X K G <4 S+ 0 0 123 -3,-1.9 -1,-0.3 -5,-0.1 -2,-0.2 0.822 121.3 4.4 -60.0 -30.2 34.5 36.4 9.4 30 30 X C T <4 S+ 0 0 94 -3,-1.8 3,-0.4 -4,-0.2 -2,-0.2 0.625 121.8 71.5-122.5 -32.7 34.0 34.7 12.9 31 31 X H S < S+ 0 0 106 -4,-2.8 3,-0.1 1,-0.2 -1,-0.0 -0.577 92.4 22.8 -98.8 156.3 37.4 34.3 14.6 32 32 X E S S+ 0 0 163 -2,-0.2 -1,-0.2 1,-0.2 2,-0.1 0.806 79.1 155.2 59.6 31.4 39.7 36.9 16.2 33 33 X K - 0 0 95 -3,-0.4 -1,-0.2 1,-0.1 3,-0.1 -0.505 51.1 -94.7 -77.4 157.2 36.9 39.4 16.7 34 34 X G > - 0 0 50 1,-0.1 3,-0.8 -2,-0.1 -1,-0.1 -0.114 57.7 -70.7 -61.5 171.1 37.4 41.9 19.4 35 35 X P T 3 S+ 0 0 140 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.145 110.4 55.2 -60.1 159.8 36.0 41.3 22.9 36 36 X G T 3> S+ 0 0 38 -3,-0.1 4,-2.1 5,-0.0 5,-0.1 0.260 70.6 108.2 102.9 -11.1 32.2 41.4 23.5 37 37 X K H <> S+ 0 0 109 -3,-0.8 4,-0.9 2,-0.2 -3,-0.0 0.788 78.8 49.5 -75.2 -28.2 31.2 38.9 20.8 38 38 X I H 4 S+ 0 0 166 2,-0.2 3,-0.4 1,-0.2 -1,-0.2 0.930 119.0 39.5 -70.7 -46.9 30.2 36.1 23.3 39 39 X E H 4 S+ 0 0 178 1,-0.2 -2,-0.2 3,-0.0 -1,-0.2 0.815 112.6 60.2 -68.5 -27.9 28.1 38.6 25.3 40 40 X G H < S+ 0 0 49 -4,-2.1 5,-0.3 2,-0.0 -1,-0.2 0.711 79.3 100.9 -76.8 -26.0 26.8 40.3 22.1 41 41 X F < + 0 0 83 -4,-0.9 2,-0.3 -3,-0.4 3,-0.0 -0.312 42.8 116.9 -70.9 146.4 25.1 37.4 20.4 42 42 X G S > S- 0 0 33 1,-0.1 4,-2.8 -2,-0.0 5,-0.2 -0.932 76.8 -53.3-178.8-162.8 21.3 37.0 20.5 43 43 X K H > S+ 0 0 154 -2,-0.3 4,-2.4 1,-0.2 5,-0.2 0.904 128.8 52.8 -66.5 -40.9 18.2 37.0 18.4 44 44 X E H > S+ 0 0 86 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.943 114.3 41.8 -61.2 -48.5 19.0 40.3 16.7 45 45 X M H >4>S+ 0 0 59 -5,-0.3 5,-1.9 1,-0.2 6,-0.8 0.920 113.4 53.5 -64.4 -44.9 22.5 39.1 15.7 46 46 X A H 3<5S+ 0 0 19 -4,-2.8 6,-2.9 4,-0.3 5,-0.4 0.881 112.8 42.3 -57.3 -40.4 21.3 35.6 14.7 47 47 X H H 3<5S+ 0 0 89 -4,-2.4 -1,-0.3 4,-0.2 -2,-0.2 0.549 125.4 40.8 -87.7 -8.5 18.6 37.0 12.4 48 48 X G T X<>S- 0 0 27 -3,-0.7 5,-3.1 -4,-0.7 3,-1.4 0.072 129.8 -32.2-107.8-134.6 21.1 39.6 11.1 49 49 X K T 3 5S+ 0 0 155 1,-0.3 -3,-0.1 4,-0.2 5,-0.1 0.694 123.0 73.2 -70.3 -17.3 24.8 39.3 10.3 50 50 X G T 3 5S+ 0 0 35 -3,-1.4 4,-1.8 -6,-0.8 3,-0.4 0.261 134.7 41.3-141.9 -73.7 23.7 33.9 11.0 52 52 X K H >5S+ 0 0 79 -6,-2.9 4,-1.9 1,-0.2 -3,-0.2 0.843 110.6 56.0 -59.6 -46.0 20.8 34.6 8.6 53 53 X G H > S+ 0 0 44 -6,-0.6 4,-2.9 -3,-0.4 5,-0.2 0.933 108.8 51.6 -65.9 -42.5 25.5 35.9 6.1 55 55 X H H X>S+ 0 0 26 -4,-1.8 5,-1.4 1,-0.2 4,-1.0 0.886 111.2 49.2 -58.4 -37.9 23.5 33.1 4.4 56 56 X E H <5S+ 0 0 95 -4,-1.9 -1,-0.2 2,-0.2 -2,-0.2 0.879 114.1 44.3 -71.1 -38.7 21.5 35.8 2.5 57 57 X E H <5S+ 0 0 155 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.902 116.4 45.4 -71.8 -42.2 24.7 37.6 1.3 58 58 X D H <5S- 0 0 91 -4,-2.9 -1,-0.2 2,-0.2 -2,-0.2 0.618 104.4-129.6 -76.3 -14.7 26.6 34.3 0.4 59 59 X K T <5S+ 0 0 176 -4,-1.0 2,-0.3 -5,-0.2 -3,-0.2 0.792 78.9 81.2 66.8 29.2 23.5 32.9 -1.4 60 60 X K < + 0 0 171 -5,-1.4 -2,-0.2 -6,-0.2 -1,-0.2 -0.958 59.2 56.2-159.5 151.9 23.8 29.6 0.5 61 61 X G S S- 0 0 38 -2,-0.3 2,-0.1 -3,-0.1 6,-0.0 -0.181 91.6 -45.9 102.8 158.7 22.7 28.4 4.0 62 62 X P + 0 0 44 0, 0.0 -7,-0.2 0, 0.0 -6,-0.1 -0.339 50.5 161.1 -66.3 131.4 19.3 28.3 5.7 63 63 X T + 0 0 38 -8,-0.1 2,-0.3 -2,-0.1 -11,-0.0 0.360 51.6 86.8-125.5 -0.4 17.2 31.5 5.6 64 64 X K S >> S- 0 0 131 1,-0.1 3,-1.5 -12,-0.0 4,-1.2 -0.803 83.0-117.4-104.6 149.1 13.7 30.0 6.4 65 65 X C H >> S+ 0 0 108 -2,-0.3 4,-2.8 1,-0.3 3,-0.7 0.868 112.7 44.9 -50.4 -52.6 12.5 29.6 10.0 66 66 X G H 34 S+ 0 0 64 1,-0.2 -1,-0.3 2,-0.2 0, 0.0 0.554 103.6 64.9 -74.5 -11.7 12.1 25.8 9.9 67 67 X E H <4 S+ 0 0 119 -3,-1.5 -1,-0.2 1,-0.1 -2,-0.2 0.803 117.7 25.1 -77.4 -32.5 15.5 25.4 8.2 68 68 X C H << S+ 0 0 37 -4,-1.2 -54,-0.6 -3,-0.7 2,-0.5 0.850 118.5 60.8 -92.6 -43.8 17.3 26.7 11.3 69 69 X H E < +B 13 0A 34 -4,-2.8 2,-0.4 -5,-0.2 -56,-0.2 -0.770 61.4 163.6 -94.3 122.8 14.8 26.0 14.1 70 70 X K E B 12 0A 133 -58,-2.4 -58,-0.6 -2,-0.5 -59,-0.1 -0.950 360.0 360.0-143.3 119.9 13.9 22.4 14.7 71 71 X K 0 0 224 -2,-0.4 -1,-0.2 -60,-0.2 -59,-0.1 0.992 360.0 360.0 -66.1 360.0 12.2 20.8 17.7