==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-DEC-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 20-JUN-11 3SJ4 . COMPND 2 MOLECULE: CYTOCHROME C7; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; . AUTHOR P.R.POKKULURI,M.SCHIFFER . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6523.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 60.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 8.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 25.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X A 0 0 153 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 162.8 35.4 20.2 19.9 2 2 X D - 0 0 150 1,-0.1 2,-0.0 15,-0.0 0, 0.0 -0.539 360.0-103.5 -91.2 156.5 31.7 19.6 19.5 3 3 X D - 0 0 97 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 -0.248 38.6-131.2 -65.1 162.3 29.1 21.6 17.6 4 4 X I E -A 15 0A 80 11,-1.0 11,-2.1 2,-0.0 2,-0.4 -0.867 7.9-147.2-121.4 157.2 26.8 23.7 19.7 5 5 X V E -A 14 0A 66 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.984 13.5-140.3-121.3 132.2 23.1 24.2 19.8 6 6 X L E -A 13 0A 66 7,-2.7 7,-2.3 -2,-0.4 2,-2.0 -0.851 18.6-133.4 -94.5 125.4 21.5 27.5 20.6 7 7 X K + 0 0 157 -2,-0.5 2,-0.2 5,-0.2 5,-0.2 -0.370 32.9 174.4 -83.6 64.7 18.5 27.0 22.8 8 8 X A > - 0 0 31 -2,-2.0 3,-1.9 3,-0.3 -2,-0.0 -0.474 36.0-129.7 -68.6 133.2 16.0 29.2 21.1 9 9 X K T 3 S+ 0 0 213 1,-0.3 3,-0.2 -2,-0.2 -1,-0.1 0.841 107.0 54.7 -56.4 -35.4 12.5 28.8 22.7 10 10 X N T 3 S- 0 0 101 1,-0.3 -1,-0.3 60,-0.0 61,-0.2 0.551 132.3 -37.4 -78.1 -7.7 10.9 28.2 19.3 11 11 X G S < S- 0 0 4 -3,-1.9 -3,-0.3 59,-0.1 -1,-0.3 -0.346 70.5 -82.5 151.1 133.4 13.3 25.4 18.4 12 12 X D - 0 0 49 58,-0.4 58,-2.3 57,-0.2 2,-0.5 -0.102 37.6-147.0 -46.7 141.7 16.9 24.4 18.8 13 13 X V E -AB 6 69A 24 -7,-2.3 -7,-2.7 56,-0.2 2,-0.2 -0.967 9.9-148.1-118.8 116.0 19.3 25.9 16.3 14 14 X K E -A 5 0A 152 54,-0.6 -9,-0.2 -2,-0.5 -11,-0.0 -0.599 4.9-159.5 -82.6 143.7 22.3 23.8 15.3 15 15 X F E -A 4 0A 71 -11,-2.1 -11,-1.0 -2,-0.2 2,-0.8 -0.941 7.3-162.3-122.2 100.6 25.6 25.4 14.4 16 16 X P > - 0 0 56 0, 0.0 4,-1.0 0, 0.0 3,-0.1 -0.779 3.4-169.4 -86.0 108.0 27.7 22.9 12.3 17 17 X H H > S+ 0 0 65 -2,-0.8 4,-2.6 1,-0.2 3,-0.5 0.902 78.5 61.1 -67.7 -42.3 31.3 24.1 12.4 18 18 X K H > S+ 0 0 162 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.923 104.6 49.3 -51.2 -47.3 32.7 21.8 9.8 19 19 X A H > S+ 0 0 56 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.839 113.1 48.8 -61.6 -33.6 30.4 23.2 7.0 20 20 X H H X S+ 0 0 55 -4,-1.0 4,-2.0 -3,-0.5 -1,-0.2 0.872 106.5 52.8 -75.3 -42.6 31.4 26.7 8.1 21 21 X Q H < S+ 0 0 120 -4,-2.6 -2,-0.2 2,-0.2 -1,-0.2 0.907 116.4 42.6 -55.4 -43.5 35.2 26.1 8.1 22 22 X K H < S+ 0 0 164 -4,-2.0 -2,-0.2 -5,-0.3 -1,-0.2 0.916 120.8 38.4 -70.5 -45.5 34.8 24.8 4.5 23 23 X A H < S+ 0 0 58 -4,-2.2 -2,-0.2 1,-0.3 -1,-0.2 0.631 123.2 40.7 -84.2 -15.9 32.3 27.4 3.1 24 24 X V < + 0 0 26 -4,-2.0 -1,-0.3 -5,-0.1 5,-0.2 -0.554 63.7 166.3-133.4 64.1 33.9 30.4 4.9 25 25 X P + 0 0 99 0, 0.0 2,-1.7 0, 0.0 3,-0.1 0.692 59.9 88.9 -57.4 -21.1 37.6 29.8 4.6 26 26 X D > - 0 0 96 1,-0.2 3,-2.1 -3,-0.1 4,-0.2 -0.605 63.7-174.6 -74.9 86.6 38.1 33.4 5.6 27 27 X C G >> S+ 0 0 72 -2,-1.7 4,-2.8 1,-0.3 3,-2.1 0.751 70.9 74.8 -58.4 -27.5 38.2 32.5 9.4 28 28 X K G 34 S+ 0 0 130 1,-0.3 -1,-0.3 2,-0.2 -2,-0.1 0.524 74.7 81.0 -70.3 -5.0 38.4 36.2 10.4 29 29 X K G <4 S+ 0 0 136 -3,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.823 120.4 4.2 -61.5 -30.9 34.7 36.4 9.6 30 30 X C T <4 S+ 0 0 91 -3,-2.1 3,-0.4 -4,-0.2 -2,-0.2 0.624 121.4 71.3-125.1 -27.7 34.1 34.8 13.0 31 31 X H S < S+ 0 0 104 -4,-2.8 3,-0.1 1,-0.2 -1,-0.0 -0.605 92.2 23.7-101.9 157.7 37.5 34.4 14.8 32 32 X E S S+ 0 0 165 -2,-0.2 -1,-0.2 1,-0.2 2,-0.1 0.809 80.0 155.1 57.6 30.9 39.8 37.0 16.3 33 33 X K - 0 0 95 -3,-0.4 -1,-0.2 1,-0.1 3,-0.1 -0.465 51.1 -95.2 -74.6 158.3 36.9 39.4 16.7 34 34 X G > - 0 0 47 1,-0.2 3,-0.8 -2,-0.1 -1,-0.1 -0.133 56.0 -71.4 -67.2 173.5 37.4 41.9 19.5 35 35 X P T 3 S+ 0 0 139 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.193 110.5 54.4 -64.2 159.9 36.0 41.3 22.9 36 36 X G T 3> S+ 0 0 38 -3,-0.1 4,-2.2 5,-0.0 5,-0.1 0.215 70.7 108.2 104.0 -14.0 32.3 41.5 23.5 37 37 X K H <> S+ 0 0 97 -3,-0.8 4,-0.9 2,-0.2 -3,-0.0 0.766 79.4 49.2 -71.6 -27.1 31.2 39.0 20.8 38 38 X I H 4 S+ 0 0 165 2,-0.2 3,-0.3 1,-0.2 -1,-0.2 0.921 118.4 39.0 -74.7 -46.1 30.2 36.3 23.4 39 39 X E H 4 S+ 0 0 177 1,-0.2 -2,-0.2 3,-0.0 -1,-0.2 0.834 114.4 58.6 -68.9 -28.9 28.2 38.7 25.4 40 40 X G H < S+ 0 0 48 -4,-2.2 5,-0.3 2,-0.0 -1,-0.2 0.709 78.6 102.8 -78.9 -23.8 26.9 40.4 22.3 41 41 X F < + 0 0 95 -4,-0.9 2,-0.3 -3,-0.3 3,-0.0 -0.328 43.1 120.6 -70.2 142.1 25.2 37.5 20.5 42 42 X G S > S- 0 0 32 1,-0.0 4,-2.7 -2,-0.0 5,-0.2 -0.904 76.0 -56.6-171.3-162.5 21.5 37.2 20.6 43 43 X K H > S+ 0 0 154 -2,-0.3 4,-2.4 1,-0.2 5,-0.2 0.899 128.2 54.9 -65.2 -41.8 18.4 37.1 18.4 44 44 X E H > S+ 0 0 87 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.944 113.4 40.3 -54.6 -54.3 19.2 40.4 16.8 45 45 X M H >4>S+ 0 0 55 -5,-0.3 5,-2.2 2,-0.2 6,-0.9 0.918 114.1 53.7 -61.9 -46.2 22.6 39.3 15.7 46 46 X A H 3<5S+ 0 0 19 -4,-2.7 6,-2.9 4,-0.3 5,-0.4 0.890 113.0 41.9 -58.0 -43.0 21.4 35.8 14.7 47 47 X H H 3<5S+ 0 0 92 -4,-2.4 -1,-0.3 4,-0.2 -2,-0.2 0.585 125.2 42.6 -82.8 -9.4 18.7 37.1 12.4 48 48 X G T X<>S- 0 0 27 -4,-0.7 5,-2.9 -3,-0.7 3,-1.5 0.028 130.2 -35.7-107.1-140.2 21.2 39.7 11.2 49 49 X K T 3 5S+ 0 0 147 1,-0.3 -3,-0.1 4,-0.2 5,-0.1 0.649 123.0 75.8 -64.1 -16.2 24.9 39.4 10.3 50 50 X G T 3 5S+ 0 0 39 -3,-1.5 4,-1.8 -6,-0.9 3,-0.5 0.289 135.7 41.4-141.9 -74.9 23.8 34.0 11.1 52 52 X K H 3>5S+ 0 0 80 -6,-2.9 4,-2.0 1,-0.2 -3,-0.2 0.864 110.5 57.6 -57.8 -45.1 21.0 34.7 8.6 53 53 X G H 3> S+ 0 0 45 -6,-0.5 4,-2.8 -3,-0.5 5,-0.3 0.935 109.3 53.5 -65.3 -43.0 25.7 36.1 6.1 55 55 X H H X>S+ 0 0 27 -4,-1.8 5,-1.3 1,-0.2 4,-0.8 0.894 111.0 47.5 -54.5 -40.9 23.7 33.3 4.5 56 56 X E H <5S+ 0 0 93 -4,-2.0 -1,-0.2 2,-0.2 -2,-0.2 0.896 113.7 45.9 -69.5 -41.1 21.8 35.9 2.5 57 57 X E H <5S+ 0 0 164 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.905 117.0 43.1 -70.8 -41.2 24.9 37.8 1.3 58 58 X K H <5S- 0 0 116 -4,-2.8 -1,-0.2 2,-0.2 -2,-0.2 0.598 105.9-128.3 -80.9 -11.5 26.8 34.6 0.3 59 59 X K T <5S+ 0 0 180 -4,-0.8 2,-0.3 -5,-0.3 -3,-0.2 0.757 77.6 86.2 67.8 26.9 23.7 33.1 -1.3 60 60 X K < + 0 0 174 -5,-1.3 -2,-0.2 -6,-0.3 -1,-0.1 -0.971 57.2 53.1-154.6 144.1 24.0 29.9 0.6 61 61 X G S S- 0 0 39 -2,-0.3 6,-0.0 -3,-0.1 -2,-0.0 -0.239 90.4 -44.9 112.1 159.3 22.8 28.6 4.0 62 62 X P + 0 0 43 0, 0.0 -7,-0.2 0, 0.0 -6,-0.1 -0.294 49.7 162.3 -64.2 131.8 19.4 28.4 5.7 63 63 X T + 0 0 47 -8,-0.1 2,-0.3 -7,-0.0 -11,-0.0 0.372 50.7 86.4-125.5 -0.2 17.3 31.6 5.6 64 64 X K S >> S- 0 0 137 1,-0.1 3,-1.5 -12,-0.0 4,-1.1 -0.785 83.5-115.7-104.1 150.6 13.8 30.3 6.5 65 65 X C H >> S+ 0 0 106 -2,-0.3 4,-2.7 1,-0.3 3,-0.8 0.884 113.9 44.6 -48.9 -54.7 12.5 29.8 10.1 66 66 X G H 34 S+ 0 0 63 1,-0.2 -1,-0.3 2,-0.2 0, 0.0 0.576 102.3 66.6 -73.7 -10.0 12.3 26.1 10.0 67 67 X E H <4 S+ 0 0 115 -3,-1.5 -1,-0.2 1,-0.1 -2,-0.2 0.788 118.3 22.8 -79.1 -28.7 15.6 25.6 8.3 68 68 X C H << S+ 0 0 37 -4,-1.1 -54,-0.6 -3,-0.8 2,-0.5 0.797 118.3 64.4 -96.9 -45.8 17.5 26.9 11.4 69 69 X H B < +B 13 0A 34 -4,-2.7 2,-0.3 -5,-0.3 -56,-0.2 -0.760 60.2 161.4 -86.8 123.3 14.9 26.2 14.1 70 70 X K 0 0 135 -58,-2.3 -58,-0.4 -2,-0.5 -59,-0.1 -0.933 360.0 360.0-147.2 120.8 14.0 22.6 14.8 71 71 X K 0 0 219 -2,-0.3 -1,-0.1 -60,-0.2 -59,-0.1 0.963 360.0 360.0 -67.9 360.0 12.3 21.0 17.8