==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/DNA 05-AUG-96 2STW . COMPND 2 MOLECULE: DNA (5'- . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.M.CLORE,M.H.WERNER,A.M.GRONENBORN . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7367.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 10.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 24.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 10 A V 0 0 120 0, 0.0 3,-0.1 0, 0.0 28,-0.1 0.000 360.0 360.0 360.0 20.3 -101.7 14.1 -29.1 2 11 A I >> + 0 0 66 1,-0.1 4,-0.7 2,-0.1 3,-0.6 -0.346 360.0 150.4-132.3 51.1 -99.5 16.2 -26.8 3 12 A P H 3>> + 0 0 35 0, 0.0 4,-5.1 0, 0.0 5,-0.6 0.545 52.0 93.5 -63.6 -2.2 -102.2 18.0 -24.8 4 13 A A H 3>5S+ 0 0 12 1,-0.2 4,-4.2 2,-0.2 5,-0.4 0.990 91.7 34.4 -54.5 -67.2 -99.6 18.1 -22.0 5 14 A A H <>5S+ 0 0 63 -3,-0.6 4,-0.9 1,-0.2 -1,-0.2 0.805 124.4 47.9 -59.2 -25.7 -98.3 21.5 -23.0 6 15 A A H <5S+ 0 0 83 -4,-0.7 -2,-0.2 2,-0.2 -1,-0.2 0.863 118.8 38.2 -84.2 -34.8 -101.9 22.4 -24.0 7 16 A L H <5S+ 0 0 93 -4,-5.1 -3,-0.2 -5,-0.1 -2,-0.2 0.942 124.4 41.0 -77.5 -49.8 -103.4 21.0 -20.7 8 17 A A H << + 0 0 29 -4,-4.2 -3,-0.2 -5,-0.6 3,-0.2 0.992 63.3 153.4 -60.7 -74.0 -100.6 22.2 -18.6 9 18 A G < + 0 0 54 -4,-0.9 2,-0.5 -5,-0.4 -1,-0.2 0.699 31.5 152.0 52.4 6.7 -100.3 25.6 -20.4 10 19 A Y - 0 0 69 1,-0.1 -1,-0.3 2,-0.0 -2,-0.1 -0.579 39.6-139.3 -72.1 113.8 -99.1 25.9 -16.8 11 20 A T - 0 0 111 -2,-0.5 2,-4.4 -3,-0.2 -1,-0.1 -0.027 35.5 -68.5 -74.8-176.7 -96.6 28.7 -17.3 12 21 A G S S+ 0 0 80 1,-0.2 2,-1.5 3,-0.0 -1,-0.1 -0.121 77.9 143.7 -67.2 50.2 -93.1 29.3 -15.9 13 22 A S S S- 0 0 104 -2,-4.4 -1,-0.2 1,-0.4 -2,-0.0 -0.278 84.2 -53.5 -86.8 49.8 -94.9 29.8 -12.6 14 23 A G S S- 0 0 35 -2,-1.5 -1,-0.4 2,-0.0 3,-0.1 0.136 88.9 -54.8 90.3 150.0 -91.9 28.1 -11.1 15 24 A P - 0 0 134 0, 0.0 3,-0.0 0, 0.0 -4,-0.0 -0.167 68.5-105.3 -53.8 149.3 -90.6 24.7 -12.3 16 25 A I - 0 0 32 1,-0.1 2,-0.3 -6,-0.1 3,-0.1 -0.356 35.7-100.1 -74.6 163.0 -93.4 22.0 -12.1 17 26 A Q > - 0 0 62 1,-0.1 4,-2.5 -3,-0.1 5,-0.3 -0.651 33.3-123.6 -82.5 135.7 -93.4 19.4 -9.4 18 27 A L H > S+ 0 0 45 -2,-0.3 4,-2.2 1,-0.2 3,-0.3 0.942 105.5 30.8 -43.0 -77.7 -91.9 16.1 -10.7 19 28 A W H > S+ 0 0 74 1,-0.2 4,-4.9 2,-0.2 5,-0.4 0.897 113.5 62.2 -56.8 -40.5 -94.8 13.8 -9.9 20 29 A Q H > S+ 0 0 89 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.962 109.6 43.0 -52.2 -46.9 -97.5 16.4 -10.4 21 30 A F H X S+ 0 0 30 -4,-2.5 4,-2.9 -3,-0.3 5,-0.3 0.984 118.8 42.8 -60.6 -56.6 -96.4 16.7 -14.0 22 31 A L H X S+ 0 0 25 -4,-2.2 4,-1.5 -5,-0.3 -2,-0.2 0.928 116.6 48.8 -57.0 -43.6 -96.1 12.9 -14.4 23 32 A L H X S+ 0 0 44 -4,-4.9 4,-1.6 -5,-0.2 -1,-0.2 0.893 110.9 50.2 -66.3 -35.6 -99.4 12.5 -12.6 24 33 A E H < S+ 0 0 79 -4,-2.8 -2,-0.2 -5,-0.4 -1,-0.2 0.934 112.8 46.0 -68.6 -40.8 -101.1 15.1 -14.8 25 34 A L H >< S+ 0 0 29 -4,-2.9 3,-0.6 -5,-0.2 -1,-0.2 0.763 108.8 61.4 -71.1 -22.1 -99.8 13.4 -17.9 26 35 A L H 3< S+ 0 0 2 -4,-1.5 2,-3.3 -5,-0.3 -2,-0.2 0.996 106.6 38.1 -68.0 -71.0 -100.9 10.1 -16.4 27 36 A T T 3< S+ 0 0 82 -4,-1.6 -1,-0.3 1,-0.0 -2,-0.1 -0.294 108.9 99.3 -74.6 57.5 -104.7 10.7 -16.1 28 37 A D S < S- 0 0 42 -2,-3.3 -3,-0.1 -3,-0.6 -2,-0.1 0.132 76.0 -18.3-117.6-131.5 -104.4 12.6 -19.4 29 38 A K S S- 0 0 64 -4,-0.2 -1,-0.1 -28,-0.1 -27,-0.0 0.518 96.3 -55.9 -61.5-146.3 -105.1 11.9 -23.1 30 39 A S - 0 0 77 1,-0.1 7,-0.1 -3,-0.1 -2,-0.1 1.000 51.5-173.8 -64.9 -68.8 -105.5 8.3 -24.6 31 40 A C + 0 0 4 5,-0.1 4,-0.3 -4,-0.1 6,-0.1 0.535 60.2 99.8 83.2 8.3 -102.1 6.7 -23.6 32 41 A Q S S+ 0 0 158 4,-0.2 -2,-0.0 2,-0.1 -3,-0.0 0.778 78.4 48.2 -92.5 -33.2 -103.0 3.7 -25.6 33 42 A S S S+ 0 0 84 1,-0.1 -1,-0.1 3,-0.0 3,-0.1 0.697 127.8 23.4 -82.8 -18.9 -100.9 4.5 -28.7 34 43 A F S S- 0 0 65 1,-0.1 14,-0.7 15,-0.0 16,-0.3 0.415 133.3 -2.8-124.8 -2.9 -97.7 5.4 -26.7 35 44 A I S S- 0 0 16 -4,-0.3 2,-0.5 12,-0.2 11,-0.2 -0.911 76.5 -89.4-166.0-168.6 -98.2 3.4 -23.5 36 45 A S E +A 45 0A 56 9,-1.4 9,-1.5 -2,-0.3 2,-0.6 -0.938 30.3 176.0-129.0 116.1 -100.6 1.2 -21.6 37 46 A W E -A 44 0A 54 -2,-0.5 7,-0.1 7,-0.2 -2,-0.0 -0.892 25.3-141.9-115.1 100.8 -103.3 2.6 -19.2 38 47 A T - 0 0 45 5,-0.8 5,-0.1 -2,-0.6 2,-0.1 -0.195 9.2-135.4 -57.0 158.8 -105.5 -0.3 -17.8 39 48 A G S S+ 0 0 84 3,-0.1 -1,-0.1 0, 0.0 3,-0.1 -0.337 80.1 70.3-111.3 49.5 -109.2 0.8 -17.4 40 49 A D S S- 0 0 154 3,-0.1 -3,-0.0 -2,-0.1 0, 0.0 0.162 104.7 -30.5-129.2-112.8 -109.8 -0.8 -13.9 41 50 A G S S- 0 0 58 1,-0.0 2,-0.1 -2,-0.0 -1,-0.0 0.853 101.9 -51.1 -82.2 -95.4 -108.4 0.4 -10.5 42 51 A W S S+ 0 0 102 -3,-0.1 2,-0.4 2,-0.0 53,-0.4 -0.482 76.0 137.9-150.0 77.0 -105.0 2.1 -10.7 43 52 A E - 0 0 112 -5,-0.1 -5,-0.8 51,-0.1 2,-0.4 -0.969 23.3-176.5-122.3 133.1 -102.2 0.2 -12.6 44 53 A F E -AB 37 93A 15 49,-1.3 49,-2.5 -2,-0.4 2,-0.4 -0.940 0.8-176.8-134.8 117.6 -99.9 2.0 -15.0 45 54 A K E -AB 36 92A 102 -9,-1.5 -9,-1.4 -2,-0.4 2,-1.1 -0.884 25.4-132.9-114.3 145.3 -97.2 0.3 -17.2 46 55 A L + 0 0 18 45,-3.5 -11,-0.1 -2,-0.4 44,-0.1 -0.742 34.7 163.3 -94.7 93.4 -94.7 2.0 -19.4 47 56 A S S S- 0 0 73 -2,-1.1 -1,-0.2 1,-0.2 -12,-0.2 0.974 77.5 -3.4 -76.4 -56.8 -94.8 0.0 -22.7 48 57 A D > + 0 0 94 -14,-0.7 2,-2.8 1,-0.0 3,-0.5 -0.568 61.5 176.6-139.4 77.1 -93.1 2.5 -25.1 49 58 A P T 3> + 0 0 18 0, 0.0 4,-1.9 0, 0.0 5,-0.3 -0.221 35.7 134.5 -73.9 52.8 -92.2 5.8 -23.4 50 59 A D H 3> S+ 0 0 121 -2,-2.8 4,-1.1 -16,-0.3 5,-0.1 0.928 79.5 30.2 -71.2 -41.4 -90.5 6.9 -26.6 51 60 A E H <> S+ 0 0 101 -3,-0.5 4,-2.1 2,-0.2 5,-0.2 0.874 123.7 48.8 -84.5 -38.0 -92.1 10.4 -26.5 52 61 A V H > S+ 0 0 32 -4,-0.2 4,-2.7 2,-0.2 5,-0.2 0.964 110.2 50.9 -65.4 -50.7 -92.2 10.6 -22.7 53 62 A A H X S+ 0 0 15 -4,-1.9 4,-1.3 1,-0.2 -1,-0.2 0.913 114.4 43.1 -56.8 -42.8 -88.6 9.5 -22.3 54 63 A R H X S+ 0 0 149 -4,-1.1 4,-1.8 -5,-0.3 -1,-0.2 0.864 111.6 54.0 -77.2 -27.1 -87.3 12.1 -24.7 55 64 A R H X S+ 0 0 97 -4,-2.1 4,-2.2 1,-0.2 5,-0.2 0.936 103.9 57.7 -67.6 -40.2 -89.6 14.9 -23.3 56 65 A W H < S+ 0 0 45 -4,-2.7 4,-0.3 1,-0.2 -1,-0.2 0.925 113.9 36.8 -54.2 -45.7 -88.2 14.1 -19.8 57 66 A G H ><>S+ 0 0 0 -4,-1.3 5,-2.1 -5,-0.2 3,-0.6 0.746 110.4 63.2 -80.9 -22.6 -84.6 14.8 -21.1 58 67 A K H ><5S+ 0 0 149 -4,-1.8 3,-3.3 1,-0.2 -2,-0.2 0.925 90.6 64.4 -68.8 -41.9 -85.8 17.7 -23.4 59 68 A R T 3<5S+ 0 0 154 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.791 104.4 49.9 -52.0 -24.0 -87.0 19.8 -20.4 60 69 A K T < 5S- 0 0 115 -3,-0.6 -1,-0.3 -4,-0.3 -2,-0.2 0.097 119.3-112.5-102.4 22.8 -83.4 19.9 -19.4 61 70 A N T < 5S+ 0 0 158 -3,-3.3 -3,-0.2 1,-0.2 -2,-0.1 0.730 76.6 137.4 54.8 18.9 -82.2 20.9 -22.9 62 71 A K < - 0 0 97 -5,-2.1 -2,-0.2 1,-0.2 -1,-0.2 -0.850 50.6-146.7 -97.6 124.9 -80.6 17.5 -23.1 63 72 A P S S+ 0 0 107 0, 0.0 2,-0.4 0, 0.0 -1,-0.2 0.954 75.4 13.2 -57.2 -58.6 -81.2 15.8 -26.5 64 73 A K + 0 0 159 -7,-0.1 2,-0.4 -8,-0.1 -10,-0.1 -0.975 57.0 177.2-130.1 135.7 -81.5 12.1 -25.5 65 74 A M - 0 0 55 -2,-0.4 -8,-0.2 -3,-0.1 -9,-0.1 -0.957 25.7-134.7-134.7 115.4 -81.9 10.4 -22.2 66 75 A N > - 0 0 89 -2,-0.4 3,-0.8 1,-0.1 4,-0.4 -0.109 28.2-109.2 -62.0 167.7 -82.3 6.7 -22.0 67 76 A Y T 3> S+ 0 0 44 1,-0.2 4,-1.6 2,-0.2 3,-0.4 0.701 107.5 83.5 -74.3 -17.6 -85.0 5.2 -19.7 68 77 A E H 3> S+ 0 0 123 1,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.886 82.8 64.9 -54.1 -34.4 -82.4 4.0 -17.2 69 78 A K H X>>S+ 0 0 57 -3,-0.8 4,-2.6 2,-0.2 3,-1.4 0.955 98.6 48.9 -53.0 -55.9 -82.4 7.5 -15.8 70 79 A L H 3>>S+ 0 0 16 -4,-0.4 4,-1.6 -3,-0.4 5,-1.1 0.967 108.8 51.8 -55.8 -46.8 -86.0 7.3 -14.6 71 80 A S H 3<5S+ 0 0 55 -4,-1.6 -1,-0.3 3,-0.2 -2,-0.2 0.770 119.0 44.8 -58.2 -17.4 -85.2 4.0 -13.0 72 81 A R H <4