==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA-BINDING DOMAIN 16-JUL-97 2SXL . COMPND 2 MOLECULE: SEX-LETHAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR M.INOUE,Y.MUTO,H.SAKAMOTO,T.KIGAWA,K.TAKIO,Y.SHIMURA, . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6352.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 51.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 12.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 20.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 146 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-162.8 -12.5 -3.2 16.4 2 2 A S + 0 0 80 1,-0.0 53,-0.1 0, 0.0 2,-0.1 -0.994 360.0 91.8-151.0 143.5 -11.5 -1.2 13.4 3 3 A N - 0 0 91 -2,-0.3 2,-0.3 1,-0.0 48,-0.0 0.036 32.8-166.2 136.0 114.5 -8.5 -1.1 10.9 4 4 A T - 0 0 26 -2,-0.1 48,-0.3 2,-0.0 51,-0.1 -0.534 20.9-155.9-121.0 65.6 -8.0 -3.0 7.7 5 5 A N - 0 0 59 -2,-0.3 46,-0.2 46,-0.2 2,-0.2 -0.039 14.6-161.1 -40.1 137.9 -4.3 -2.6 7.0 6 6 A L E -A 50 0A 0 44,-1.0 44,-1.5 73,-0.2 2,-0.4 -0.643 12.8-125.4-118.4 178.7 -3.6 -3.0 3.3 7 7 A I E -AB 49 78A 3 71,-1.6 71,-1.5 42,-0.3 2,-0.6 -0.978 12.1-153.7-131.1 124.6 -0.5 -3.7 1.2 8 8 A V E +A 48 0A 2 40,-0.9 40,-1.7 -2,-0.4 69,-0.2 -0.831 22.0 179.9 -97.5 123.3 0.7 -1.5 -1.7 9 9 A N + 0 0 29 -2,-0.6 67,-1.5 67,-0.4 38,-0.2 -0.438 50.5 64.7-111.2-171.4 2.7 -3.4 -4.3 10 10 A Y S S+ 0 0 125 36,-0.5 -1,-0.2 65,-0.2 36,-0.1 0.896 70.2 161.1 64.8 38.3 4.5 -2.4 -7.6 11 11 A L - 0 0 10 -3,-0.2 -1,-0.2 1,-0.1 63,-0.0 -0.658 49.5-131.8 -92.8 151.1 6.9 -0.2 -5.6 12 12 A P - 0 0 25 0, 0.0 -1,-0.1 0, 0.0 32,-0.1 0.420 42.8-117.7 -78.2 0.7 10.3 0.9 -7.1 13 13 A Q S S+ 0 0 95 1,-0.1 31,-0.2 30,-0.1 -2,-0.0 0.483 109.4 60.7 75.7 -2.2 12.0 -0.2 -3.8 14 14 A D S S+ 0 0 113 2,-0.0 -1,-0.1 30,-0.0 -3,-0.0 0.469 75.2 106.5-130.5 -11.9 12.9 3.5 -3.4 15 15 A M - 0 0 9 1,-0.1 2,-0.4 2,-0.0 -4,-0.0 -0.051 62.4-131.8 -61.5 173.8 9.6 5.3 -3.3 16 16 A T > - 0 0 63 1,-0.1 4,-1.8 18,-0.0 3,-0.4 -0.984 16.7-123.8-133.6 144.4 8.4 6.6 0.1 17 17 A D H > S+ 0 0 19 -2,-0.4 4,-1.8 1,-0.2 5,-0.1 0.728 109.2 71.5 -57.3 -15.4 5.0 6.3 1.9 18 18 A R H >> S+ 0 0 214 2,-0.2 4,-1.5 1,-0.2 3,-0.7 0.992 99.3 40.6 -65.9 -58.0 5.2 10.1 1.9 19 19 A E H 3> S+ 0 0 60 -3,-0.4 4,-0.6 1,-0.3 3,-0.3 0.901 114.0 57.6 -56.9 -33.6 4.5 10.5 -1.8 20 20 A L H >X S+ 0 0 6 -4,-1.8 4,-2.5 1,-0.2 3,-1.2 0.879 99.7 57.0 -62.6 -36.4 2.0 7.7 -1.2 21 21 A Y H S+ 0 0 151 -4,-0.0 4,-1.8 -52,-0.0 -1,-0.2 0.189 116.2 34.1-148.7 -77.6 -15.2 0.8 4.2 57 57 A D H > S+ 0 0 102 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.896 119.9 58.1 -56.5 -34.1 -14.2 3.8 2.2 58 58 A S H > S+ 0 0 0 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.971 99.1 55.0 -60.3 -53.5 -10.8 2.2 2.1 59 59 A Q H > S+ 0 0 85 1,-0.2 4,-1.7 2,-0.2 3,-0.4 0.916 107.7 51.0 -48.3 -43.7 -12.1 -1.0 0.5 60 60 A R H >X S+ 0 0 177 -4,-1.8 4,-1.5 1,-0.3 3,-0.5 0.962 109.4 49.0 -60.3 -46.6 -13.5 1.2 -2.3 61 61 A A H 3X S+ 0 0 2 -4,-2.2 4,-1.4 1,-0.2 5,-0.5 0.737 106.5 60.3 -64.7 -17.6 -10.1 2.8 -2.6 62 62 A I H 3X S+ 0 0 4 -4,-1.7 4,-0.7 -3,-0.4 -1,-0.2 0.869 103.9 46.6 -78.8 -35.1 -8.7 -0.7 -2.7 63 63 A K H << S+ 0 0 174 -4,-1.7 -2,-0.2 -3,-0.5 -1,-0.2 0.787 125.3 34.2 -76.1 -24.3 -10.8 -1.6 -5.8 64 64 A V H < S+ 0 0 97 -4,-1.5 -2,-0.2 -5,-0.2 -3,-0.2 0.902 115.5 47.4 -92.3 -73.2 -9.6 1.6 -7.4 65 65 A L H >< S+ 0 0 10 -4,-1.4 3,-0.6 -5,-0.1 2,-0.4 0.815 84.2 112.7 -40.1 -31.7 -6.0 2.4 -6.2 66 66 A N T 3< S+ 0 0 73 -4,-0.7 10,-0.2 -5,-0.5 9,-0.1 -0.210 94.3 2.0 -47.4 102.4 -5.3 -1.2 -7.1 67 67 A G T 3 S+ 0 0 35 8,-0.9 -1,-0.2 -2,-0.4 9,-0.2 0.964 90.2 151.7 82.4 60.4 -3.0 -0.6 -10.1 68 68 A I < - 0 0 34 -3,-0.6 2,-0.3 7,-0.5 -2,-0.0 0.510 48.2 -85.8 -92.3-120.0 -2.7 3.2 -10.3 69 69 A T - 0 0 100 5,-0.2 2,-0.5 2,-0.0 5,-0.3 -0.834 22.3-166.3-160.7 120.6 0.5 4.9 -11.7 70 70 A V - 0 0 10 3,-1.2 4,-0.1 -2,-0.3 -55,-0.0 -0.342 67.6 -87.6-101.6 54.8 3.8 5.8 -10.1 71 71 A R S S+ 0 0 183 -2,-0.5 3,-0.1 1,-0.2 -1,-0.1 0.754 127.6 22.7 52.3 18.7 5.1 8.1 -12.9 72 72 A N S S+ 0 0 130 1,-0.5 -1,-0.2 0, 0.0 2,-0.2 0.256 128.3 20.2-179.3 -29.3 6.5 4.8 -14.4 73 73 A K S S- 0 0 112 -63,-0.1 -3,-1.2 0, 0.0 -1,-0.5 -0.502 78.5 -97.4-135.2-154.4 4.6 1.8 -13.0 74 74 A R - 0 0 174 -5,-0.3 -5,-0.2 -2,-0.2 -7,-0.1 -0.854 30.5-137.8-140.5 104.5 1.3 0.9 -11.4 75 75 A L - 0 0 4 -2,-0.4 -8,-0.9 -8,-0.1 -7,-0.5 0.028 19.6-138.7 -50.4 169.1 1.0 0.6 -7.5 76 76 A K - 0 0 71 -67,-1.5 -67,-0.4 -10,-0.2 2,-0.3 -0.882 13.0-163.5-128.9 161.7 -1.1 -2.3 -6.2 77 77 A V + 0 0 5 -2,-0.3 2,-0.3 -69,-0.2 -69,-0.2 -0.874 15.3 160.7-152.7 117.4 -3.5 -2.4 -3.2 78 78 A S B -B 7 0A 22 -71,-1.5 -71,-1.6 -2,-0.3 2,-1.1 -0.822 53.1 -99.3-129.4 170.5 -4.9 -5.4 -1.4 79 79 A Y S S- 0 0 95 -2,-0.3 -73,-0.2 -73,-0.2 -74,-0.1 -0.144 77.0 -83.5 -83.4 45.1 -6.6 -6.0 2.0 80 80 A A S S+ 0 0 31 -2,-1.1 -1,-0.1 -73,-0.1 -74,-0.1 0.988 94.7 124.9 54.4 69.5 -3.2 -7.3 3.5 81 81 A R > + 0 0 144 4,-0.1 4,-1.6 -74,-0.1 3,-0.3 -0.217 27.7 157.1-154.3 55.8 -3.5 -10.9 2.2 82 82 A P H >> + 0 0 49 0, 0.0 5,-1.1 0, 0.0 4,-0.5 -0.318 61.3 26.1 -78.6 163.5 -0.3 -11.7 0.2 83 83 A G H >5S- 0 0 67 1,-0.2 4,-1.3 3,-0.2 5,-0.1 0.955 147.8 -38.0 47.9 58.7 0.9 -15.2 -0.4 84 84 A G H 45S- 0 0 36 -3,-0.3 -1,-0.2 3,-0.2 0, 0.0 0.985 118.9 -49.8 59.4 57.5 -2.5 -16.8 0.1 85 85 A E H <5S- 0 0 104 -4,-1.6 -4,-0.1 1,-0.2 -2,-0.1 0.899 125.0 -23.1 45.3 95.5 -3.6 -14.4 2.9 86 86 A S H <5S- 0 0 88 -4,-0.5 -1,-0.2 2,-0.0 -3,-0.2 0.884 135.0 -45.9 41.0 43.5 -0.6 -14.5 5.3 87 87 A I << 0 0 136 -4,-1.3 -3,-0.2 -5,-1.1 -4,-0.1 0.367 360.0 360.0 77.6 142.0 0.2 -18.0 3.8 88 88 A K 0 0 199 -5,-0.1 -1,-0.1 0, 0.0 -3,-0.1 -0.938 360.0 360.0 178.6 360.0 -2.5 -20.6 3.2