==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 18-JUL-11 3SYU . COMPND 2 MOLECULE: GUANYL-SPECIFIC RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR O.S.SMART,T.O.WOMACK,G.BRICOGNE . 103 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5519.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 56.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 27.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A a 0 0 103 0, 0.0 10,-0.2 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 126.0 37.8 -41.1 25.3 2 3 A D + 0 0 95 8,-0.8 2,-0.4 1,-0.3 9,-0.2 0.863 360.0 17.2 -71.5 -37.1 36.7 -44.7 24.9 3 4 A Y E S-A 10 0A 63 7,-2.2 7,-2.8 2,-0.0 2,-0.5 -0.997 71.3-161.6-136.0 129.2 35.6 -43.9 21.3 4 5 A T E -A 9 0A 47 -2,-0.4 99,-1.9 5,-0.2 2,-0.6 -0.978 6.5-176.8-113.4 116.6 36.8 -40.8 19.4 5 6 A b E > -A 8 0A 0 3,-2.3 3,-2.4 -2,-0.5 2,-0.5 -0.908 69.3 -61.6-110.8 94.4 34.7 -39.9 16.3 6 7 A G T 3 S- 0 0 42 -2,-0.6 97,-0.1 1,-0.3 84,-0.0 -0.543 121.6 -16.0 64.3-111.3 36.5 -36.9 14.8 7 8 A S T 3 S+ 0 0 126 -2,-0.5 2,-0.3 -3,-0.1 -1,-0.3 0.523 115.7 104.7 -95.1 -11.7 36.4 -34.3 17.7 8 9 A N E < -A 5 0A 48 -3,-2.4 -3,-2.3 1,-0.0 2,-0.5 -0.598 57.2-153.7 -82.1 138.3 33.6 -36.1 19.6 9 10 A a E -A 4 0A 71 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.930 13.2-175.0-114.2 118.7 34.5 -38.0 22.7 10 11 A Y E -A 3 0A 4 -7,-2.8 -7,-2.2 -2,-0.5 -8,-0.8 -0.954 12.3-150.4-121.6 136.0 32.3 -41.0 23.8 11 12 A S > - 0 0 38 -2,-0.4 4,-1.8 -9,-0.2 3,-0.3 -0.564 36.6-105.4 -90.1 164.8 32.5 -43.1 27.0 12 13 A S H > S+ 0 0 68 1,-0.2 4,-2.3 2,-0.2 5,-0.1 0.824 123.9 54.9 -61.0 -27.6 31.4 -46.8 27.1 13 14 A S H > S+ 0 0 72 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.872 104.4 52.0 -74.3 -37.0 28.3 -45.5 29.1 14 15 A D H > S+ 0 0 55 -3,-0.3 4,-1.9 2,-0.2 -2,-0.2 0.887 113.1 46.3 -60.7 -42.9 27.3 -43.0 26.3 15 16 A V H X S+ 0 0 2 -4,-1.8 4,-3.0 2,-0.2 -2,-0.2 0.934 111.9 49.4 -66.3 -47.7 27.5 -45.9 23.8 16 17 A S H X S+ 0 0 71 -4,-2.3 4,-2.3 1,-0.2 -2,-0.2 0.870 111.1 50.7 -59.5 -40.4 25.5 -48.3 25.9 17 18 A T H X S+ 0 0 78 -4,-2.2 4,-1.5 2,-0.2 -1,-0.2 0.929 113.1 44.6 -65.5 -43.9 22.8 -45.6 26.4 18 19 A A H X S+ 0 0 6 -4,-1.9 4,-2.2 1,-0.2 -2,-0.2 0.937 114.0 50.0 -64.3 -47.2 22.6 -44.9 22.7 19 20 A Q H X S+ 0 0 18 -4,-3.0 4,-2.7 1,-0.2 -1,-0.2 0.880 105.5 56.3 -59.6 -43.1 22.6 -48.7 21.8 20 21 A A H X S+ 0 0 54 -4,-2.3 4,-1.8 1,-0.2 -1,-0.2 0.913 109.7 46.6 -59.9 -41.4 19.8 -49.5 24.3 21 22 A A H X S+ 0 0 27 -4,-1.5 4,-1.5 1,-0.2 -1,-0.2 0.913 113.8 46.1 -67.6 -46.0 17.5 -46.9 22.7 22 23 A G H X S+ 0 0 0 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.900 111.1 53.7 -62.0 -42.0 18.2 -48.1 19.1 23 24 A Y H X S+ 0 0 46 -4,-2.7 4,-2.3 -5,-0.2 -2,-0.2 0.909 105.1 53.4 -60.8 -43.0 17.7 -51.7 20.0 24 25 A Q H X S+ 0 0 137 -4,-1.8 4,-1.6 1,-0.2 -1,-0.2 0.923 111.2 45.7 -58.5 -44.5 14.3 -51.2 21.6 25 26 A L H X>S+ 0 0 32 -4,-1.5 5,-2.0 1,-0.2 4,-0.7 0.899 110.1 54.9 -65.7 -42.4 13.0 -49.5 18.4 26 27 A H H ><5S+ 0 0 37 -4,-2.2 3,-1.1 1,-0.2 -2,-0.2 0.930 109.1 46.7 -55.2 -47.2 14.5 -52.2 16.3 27 28 A E H 3<5S+ 0 0 99 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.820 110.5 54.0 -64.9 -31.7 12.6 -54.9 18.3 28 29 A D H 3<5S- 0 0 97 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.542 109.3-122.8 -80.6 -13.2 9.4 -53.0 18.1 29 30 A G T <<5S+ 0 0 71 -3,-1.1 2,-0.3 -4,-0.7 -3,-0.2 0.839 72.4 121.8 73.2 30.7 9.5 -52.7 14.3 30 31 A E < - 0 0 113 -5,-2.0 2,-0.3 -6,-0.1 -1,-0.3 -0.884 42.9-163.8-123.3 155.5 9.4 -48.9 14.6 31 32 A T - 0 0 71 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.928 5.3-149.6-136.8 159.8 11.7 -46.1 13.4 32 33 A V B > +B 37 0B 49 5,-2.4 5,-2.4 -2,-0.3 37,-0.2 -0.941 53.8 28.7-128.7 151.6 12.2 -42.3 14.2 33 34 A G T > 5S- 0 0 26 -2,-0.3 3,-1.9 3,-0.2 37,-0.1 0.154 92.8 -73.3 84.9 161.0 13.4 -39.4 12.1 34 35 A S T 3 5S+ 0 0 112 35,-0.4 -1,-0.1 1,-0.3 37,-0.1 0.767 132.9 50.1 -63.4 -22.4 13.3 -38.6 8.4 35 36 A N T 3 5S- 0 0 84 -3,-0.1 -1,-0.3 34,-0.0 -2,-0.1 0.209 111.8-123.0 -98.2 11.4 16.0 -41.2 7.7 36 37 A S T < 5 - 0 0 56 -3,-1.9 -3,-0.2 1,-0.2 -2,-0.1 0.913 36.3-132.9 49.3 71.5 14.2 -43.9 9.7 37 38 A Y B + 0 0 35 2,-0.0 3,-0.9 3,-0.0 -1,-0.0 0.861 48.0 158.2 65.5 46.7 29.0 -53.2 6.1 44 45 A Y T 3 S+ 0 0 193 1,-0.3 54,-0.0 2,-0.1 -1,-0.0 0.844 71.8 62.6 -61.3 -35.3 30.0 -52.1 2.5 45 46 A E T 3 S- 0 0 50 1,-0.1 -1,-0.3 55,-0.0 -2,-0.0 0.746 106.9-129.7 -64.4 -26.5 33.1 -50.6 4.1 46 47 A G < - 0 0 55 -3,-0.9 2,-0.1 1,-0.2 -2,-0.1 0.879 35.4-179.7 81.2 37.3 34.2 -54.0 5.2 47 48 A F - 0 0 30 1,-0.1 2,-1.5 53,-0.0 -1,-0.2 -0.457 33.3-122.4 -67.6 144.4 35.0 -53.3 8.9 48 49 A D - 0 0 154 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.614 38.9-179.5 -90.2 77.7 36.2 -56.3 10.8 49 50 A F - 0 0 17 -2,-1.5 38,-0.1 1,-0.1 37,-0.1 -0.536 24.3-146.6 -79.3 142.0 33.5 -56.4 13.5 50 51 A S S S+ 0 0 123 36,-0.4 2,-0.3 -2,-0.2 -1,-0.1 0.473 76.2 70.9 -94.9 2.1 34.0 -59.3 16.1 51 52 A V S S- 0 0 27 35,-0.1 -2,-0.1 1,-0.1 35,-0.0 -0.793 91.0 -94.8-111.5 159.6 30.2 -59.9 16.7 52 53 A S - 0 0 68 -2,-0.3 30,-0.2 1,-0.1 29,-0.2 -0.217 47.6 -95.9 -75.8 155.3 27.8 -61.5 14.2 53 54 A S S S+ 0 0 78 27,-0.1 2,-0.2 2,-0.1 27,-0.1 -0.425 77.6 97.0 -91.2 172.0 25.5 -59.7 11.7 54 55 A P - 0 0 47 0, 0.0 27,-0.7 0, 0.0 2,-0.3 0.492 66.2-163.2 -63.4 150.6 22.8 -58.6 10.8 55 56 A Y E -CD 41 80C 27 -14,-0.6 -14,-2.5 25,-0.2 2,-0.3 -0.868 11.0-165.6-109.4 151.3 24.0 -55.1 11.9 56 57 A Y E -CD 40 79C 28 23,-2.8 23,-2.1 -2,-0.3 2,-0.3 -0.964 11.1-141.6-133.1 145.9 21.8 -52.0 12.5 57 58 A X E +CD 39 78C 54 -18,-3.1 -18,-1.4 -2,-0.3 21,-0.2 -0.864 18.8 175.3-115.9 145.3 22.9 -48.4 12.8 58 59 A W E - D 0 77C 3 19,-2.0 19,-2.7 -2,-0.3 2,-0.1 -0.989 36.6-100.7-142.9 135.1 21.5 -45.8 15.2 59 60 A P E - D 0 76C 0 0, 0.0 8,-0.6 0, 0.0 2,-0.4 -0.381 25.5-160.6 -63.8 142.5 22.8 -42.2 15.7 60 61 A I B -G 66 0D 9 15,-1.3 15,-0.4 12,-0.2 2,-0.4 -0.973 18.8-142.1-116.2 129.9 25.0 -41.3 18.7 61 62 A L > - 0 0 31 4,-0.6 3,-1.8 -2,-0.4 12,-0.1 -0.843 15.3-140.4-106.0 138.4 25.1 -37.6 19.5 62 63 A S T 3 S+ 0 0 83 -2,-0.4 -53,-0.2 1,-0.3 -1,-0.1 0.754 100.3 69.5 -59.6 -28.6 28.0 -35.4 20.7 63 64 A S T 3 S- 0 0 83 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.625 110.0-118.3 -65.0 -18.2 25.6 -33.5 23.0 64 65 A G S < S+ 0 0 51 -3,-1.8 2,-0.1 1,-0.3 -2,-0.1 0.085 75.4 115.3 99.9 -19.8 25.2 -36.7 25.3 65 66 A D S S- 0 0 98 1,-0.1 -4,-0.6 -5,-0.0 -1,-0.3 -0.405 73.4 -98.7 -85.9 157.8 21.4 -37.2 24.8 66 67 A V B -G 60 0D 51 1,-0.1 -6,-0.1 -2,-0.1 -1,-0.1 -0.505 50.7 -91.2 -70.8 141.2 19.8 -40.1 23.1 67 68 A Y - 0 0 9 -8,-0.6 -1,-0.1 -2,-0.2 -7,-0.0 -0.324 44.5-177.1 -56.1 127.4 18.8 -39.6 19.4 68 69 A S - 0 0 103 3,-0.1 -35,-0.1 -3,-0.1 -1,-0.1 -0.070 57.6 -75.2-127.7 35.9 15.2 -38.3 19.5 69 70 A G S S+ 0 0 28 -37,-0.2 -35,-0.4 1,-0.1 -36,-0.1 0.539 99.3 99.0 91.0 5.9 14.3 -38.0 15.7 70 71 A G S S- 0 0 47 1,-0.3 -36,-0.2 -37,-0.1 -1,-0.1 0.226 86.6 -19.4 -95.2-141.7 16.1 -34.9 14.6 71 72 A S - 0 0 99 1,-0.1 -1,-0.3 -38,-0.1 -3,-0.1 -0.527 54.5-149.2 -70.0 128.6 19.4 -34.5 12.8 72 73 A P - 0 0 16 0, 0.0 3,-0.4 0, 0.0 -12,-0.2 0.650 28.4-154.5 -72.0 -15.0 21.4 -37.8 13.1 73 74 A G - 0 0 43 1,-0.2 -12,-0.1 -14,-0.1 18,-0.0 -0.233 39.6 -60.3 66.6-164.3 24.8 -36.0 12.9 74 75 A A S S+ 0 0 32 -69,-0.1 17,-2.0 16,-0.1 2,-0.3 0.629 106.0 81.8 -89.4 -19.5 27.9 -37.7 11.7 75 76 A D E - E 0 90C 3 -15,-0.4 -15,-1.3 -3,-0.4 2,-0.4 -0.698 49.9-176.1-105.0 147.9 28.2 -40.6 14.2 76 77 A R E -DE 59 89C 6 13,-2.8 13,-2.5 -2,-0.3 2,-0.4 -0.997 21.4-142.6-140.2 147.6 26.6 -44.0 14.6 77 78 A V E -DE 58 88C 0 -19,-2.7 -19,-2.0 -2,-0.4 2,-0.5 -0.840 22.6-152.9 -97.2 138.7 26.5 -46.9 17.0 78 79 A V E +DE 57 87C 0 9,-2.8 8,-2.8 -2,-0.4 9,-1.6 -0.982 22.6 164.1-117.3 126.7 26.3 -50.3 15.2 79 80 A F E -DE 56 85C 0 -23,-2.1 -23,-2.8 -2,-0.5 6,-0.2 -0.874 23.5-130.7-135.7 167.2 24.7 -53.2 17.0 80 81 A N E > -D 55 0C 0 4,-1.8 3,-1.8 -2,-0.3 -25,-0.2 -0.383 39.8 -81.1-114.1-175.2 23.4 -56.6 16.1 81 82 A E T 3 S+ 0 0 68 -27,-0.7 -26,-0.1 1,-0.3 -28,-0.1 0.681 126.9 51.5 -61.0 -24.0 20.2 -58.8 16.6 82 83 A N T 3 S- 0 0 109 -30,-0.2 -1,-0.3 2,-0.1 -59,-0.0 0.131 119.7-107.0 -97.8 12.6 21.4 -59.9 20.1 83 84 A N < + 0 0 61 -3,-1.8 2,-0.4 1,-0.2 -2,-0.1 0.878 69.9 148.9 62.8 37.5 22.0 -56.3 21.2 84 85 A Q - 0 0 89 -32,-0.1 -4,-1.8 -65,-0.0 2,-0.4 -0.879 52.1-114.2-100.4 142.0 25.8 -56.8 21.0 85 86 A L E +E 79 0C 52 -2,-0.4 -6,-0.3 -6,-0.2 3,-0.1 -0.608 32.3 177.4 -73.4 123.0 27.9 -53.7 20.2 86 87 A A E - 0 0 14 -8,-2.8 -36,-0.4 -2,-0.4 2,-0.3 0.853 56.0 -66.6 -90.3 -47.2 29.7 -54.1 16.8 87 88 A G E -E 78 0C 7 -9,-1.6 -9,-2.8 -38,-0.1 2,-0.4 -0.985 37.8 -96.0 176.0-176.9 31.4 -50.7 16.7 88 89 A V E +E 77 0C 2 -2,-0.3 14,-2.9 14,-0.3 2,-0.3 -0.999 42.4 178.0-129.6 123.0 31.1 -46.9 16.5 89 90 A I E -EF 76 101C 0 -13,-2.5 -13,-2.8 -2,-0.4 2,-0.3 -0.848 8.3-166.6-128.1 164.9 31.5 -45.3 13.1 90 91 A T E -EF 75 100C 2 10,-2.8 10,-2.5 -2,-0.3 -15,-0.2 -0.999 32.7-137.1-152.5 153.7 31.4 -41.9 11.6 91 92 A H S > S+ 0 0 57 -17,-2.0 3,-2.0 -2,-0.3 2,-0.3 0.710 78.9 106.2 -79.3 -20.6 31.2 -39.9 8.3 92 93 A T T 3 S+ 0 0 70 1,-0.3 -86,-0.2 -18,-0.2 8,-0.1 -0.467 91.8 9.2 -66.1 119.6 33.9 -37.5 9.8 93 94 A G T 3 S+ 0 0 77 1,-0.4 -1,-0.3 -2,-0.3 2,-0.3 0.313 105.6 111.2 94.4 -5.4 37.2 -38.3 8.0 94 95 A A < - 0 0 25 -3,-2.0 -1,-0.4 4,-0.2 2,-0.2 -0.699 66.3-122.7 -99.7 152.8 35.7 -40.6 5.4 95 96 A S S > S- 0 0 95 -2,-0.3 3,-1.8 4,-0.1 2,-0.0 -0.597 73.5 -8.4 -88.9 160.1 35.4 -39.7 1.7 96 97 A G T 3 S- 0 0 84 1,-0.2 -2,-0.1 -2,-0.2 0, 0.0 -0.343 125.3 -38.0 57.8-136.9 32.1 -39.6 -0.2 97 98 A N T 3 S+ 0 0 135 2,-0.1 -1,-0.2 -2,-0.0 -2,-0.0 0.110 108.0 118.1-108.0 21.7 29.2 -41.0 1.8 98 99 A N < - 0 0 77 -3,-1.8 2,-0.3 -7,-0.1 -4,-0.2 -0.238 56.4-131.1 -75.0 172.1 31.3 -43.8 3.4 99 100 A F - 0 0 9 -6,-0.1 2,-0.3 -2,-0.0 -8,-0.2 -0.834 9.8-155.7-118.0 159.9 32.1 -44.2 7.1 100 101 A V E -F 90 0C 55 -10,-2.5 -10,-2.8 -2,-0.3 2,-0.2 -0.892 33.1 -98.6-126.5 160.4 35.4 -44.8 9.0 101 102 A E E -F 89 0C 89 -2,-0.3 -12,-0.3 -12,-0.2 2,-0.2 -0.540 31.8-120.5 -79.6 144.6 35.6 -46.4 12.4 102 103 A b 0 0 14 -14,-2.9 -14,-0.3 -2,-0.2 -97,-0.2 -0.620 360.0 360.0 -77.3 149.1 35.9 -44.3 15.5 103 104 A T 0 0 139 -99,-1.9 -98,-0.1 -2,-0.2 -1,-0.1 0.639 360.0 360.0-106.8 360.0 39.2 -45.0 17.5