==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-APR-04 1T07 . COMPND 2 MOLECULE: HYPOTHETICAL UPF0269 PROTEIN PA5148; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; . AUTHOR Y.KIM,A.JOACHIMIAK,T.SKARINA,A.SAVCHENKO,A.EDWARDS,MIDWEST . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5810.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 64.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 8.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 44.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A G 0 0 121 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 176.3 5.7 2.4 -9.0 2 0 A H - 0 0 188 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.761 360.0-106.6-132.1 178.0 5.7 0.4 -5.8 3 1 A X + 0 0 193 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.925 40.0 172.9-111.9 137.0 3.8 0.3 -2.5 4 2 A S - 0 0 61 -2,-0.4 2,-0.4 13,-0.0 16,-0.0 -0.994 37.3-121.6-146.6 147.7 5.4 1.6 0.6 5 3 A R - 0 0 78 -2,-0.3 13,-2.7 13,-0.2 2,-0.3 -0.708 44.4-168.9 -78.0 137.5 4.5 2.3 4.2 6 4 A T E -A 17 0A 65 -2,-0.4 2,-0.3 11,-0.3 9,-0.1 -0.917 14.6-169.9-130.5 161.3 5.3 6.0 4.6 7 5 A V E -A 16 0A 11 9,-2.4 9,-2.4 -2,-0.3 2,-0.9 -0.935 39.2-100.0-140.5 162.6 5.6 8.5 7.5 8 6 A X E -A 15 0A 124 -2,-0.3 2,-0.4 26,-0.3 7,-0.2 -0.812 51.5-131.6 -82.9 112.1 6.0 12.2 8.0 9 7 A C E >> -A 14 0A 0 5,-2.6 4,-1.9 -2,-0.9 5,-0.5 -0.537 12.0-152.7 -73.5 125.3 9.8 12.2 8.6 10 8 A R T 45S+ 0 0 81 25,-3.0 -1,-0.2 -2,-0.4 26,-0.1 0.862 95.7 46.8 -65.5 -34.2 10.8 14.2 11.6 11 9 A K T 45S+ 0 0 28 24,-0.4 -1,-0.2 1,-0.2 70,-0.1 0.978 123.5 28.5 -72.8 -53.2 14.2 14.8 10.1 12 10 A Y T 45S- 0 0 59 2,-0.2 -2,-0.2 64,-0.1 -1,-0.2 0.529 93.6-133.6 -88.1 -4.6 13.2 15.9 6.6 13 11 A H T <5S+ 0 0 133 -4,-1.9 2,-0.3 1,-0.2 -3,-0.1 0.908 72.5 92.0 53.7 44.6 9.8 17.3 7.4 14 12 A E E S- 0 0 49 1,-0.2 4,-2.0 2,-0.1 5,-0.2 -0.277 97.1 -56.9 107.1 170.4 11.7 -0.4 23.2 27 25 A A H > S+ 0 0 83 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.870 129.0 49.1 -56.2 -46.1 10.5 3.2 23.2 28 26 A K H > S+ 0 0 121 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.915 111.3 50.1 -62.9 -45.0 13.4 4.6 21.2 29 27 A G H > S+ 0 0 0 -4,-0.3 4,-2.2 1,-0.2 -1,-0.2 0.859 110.7 50.1 -61.4 -35.0 13.0 1.9 18.5 30 28 A E H X S+ 0 0 123 -4,-2.0 4,-2.4 2,-0.2 -1,-0.2 0.890 107.7 53.3 -71.1 -38.6 9.2 2.7 18.4 31 29 A D H X S+ 0 0 49 -4,-2.3 4,-2.7 2,-0.2 5,-0.2 0.921 110.2 47.9 -60.9 -45.6 9.9 6.4 18.0 32 30 A I H X S+ 0 0 3 -4,-2.3 4,-2.2 1,-0.2 -13,-0.2 0.946 111.4 50.4 -61.9 -46.5 12.2 5.7 15.0 33 31 A Y H < S+ 0 0 63 -4,-2.2 -14,-0.3 1,-0.2 -2,-0.2 0.890 119.3 36.8 -58.5 -41.5 9.6 3.4 13.4 34 32 A N H < S+ 0 0 78 -4,-2.4 -26,-0.3 1,-0.1 -1,-0.2 0.792 131.9 22.4 -82.3 -30.1 6.9 6.0 13.8 35 33 A N H < S+ 0 0 60 -4,-2.7 -25,-3.0 -5,-0.2 2,-0.4 0.384 103.1 76.0-125.3 4.2 8.8 9.2 13.1 36 34 A V < - 0 0 0 -4,-2.2 -17,-0.6 -27,-0.2 -27,-0.1 -0.978 68.1-131.5-125.6 125.9 11.9 8.6 11.1 37 35 A S B > -B 18 0B 0 -2,-0.4 4,-2.5 -19,-0.2 -19,-0.3 -0.234 23.1-117.2 -68.1 159.4 12.1 7.8 7.4 38 36 A R H > S+ 0 0 86 -21,-2.8 4,-3.0 1,-0.2 5,-0.2 0.921 118.8 54.1 -62.1 -39.6 14.1 4.9 5.9 39 37 A K H > S+ 0 0 103 -22,-0.5 4,-2.8 1,-0.2 5,-0.2 0.933 108.9 46.6 -58.9 -48.5 16.2 7.6 4.1 40 38 A A H > S+ 0 0 0 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.908 113.7 49.2 -60.3 -42.8 16.9 9.4 7.4 41 39 A W H X S+ 0 0 30 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.913 113.6 45.7 -63.4 -44.2 17.8 6.1 9.1 42 40 A D H X S+ 0 0 77 -4,-3.0 4,-2.2 2,-0.2 -2,-0.2 0.893 112.0 51.0 -65.9 -41.8 20.1 5.1 6.3 43 41 A E H X S+ 0 0 62 -4,-2.8 4,-2.5 -5,-0.2 -1,-0.2 0.867 109.2 52.4 -64.5 -36.5 21.8 8.5 6.1 44 42 A W H X S+ 0 0 2 -4,-2.2 4,-3.2 -5,-0.2 -2,-0.2 0.935 107.6 51.1 -64.7 -44.6 22.3 8.3 9.9 45 43 A Q H X S+ 0 0 67 -4,-2.2 4,-2.1 1,-0.2 -2,-0.2 0.921 111.8 47.7 -58.7 -41.2 24.0 4.9 9.5 46 44 A K H X S+ 0 0 120 -4,-2.2 4,-1.9 1,-0.2 -1,-0.2 0.916 113.9 46.5 -65.4 -43.1 26.3 6.4 6.8 47 45 A H H X S+ 0 0 42 -4,-2.5 4,-2.4 1,-0.2 -2,-0.2 0.898 110.4 53.7 -66.7 -37.7 27.1 9.4 9.0 48 46 A Q H X S+ 0 0 30 -4,-3.2 4,-2.4 1,-0.2 -1,-0.2 0.893 108.0 49.7 -63.7 -40.2 27.7 7.1 12.0 49 47 A T H X S+ 0 0 73 -4,-2.1 4,-2.3 -5,-0.2 -1,-0.2 0.898 110.0 52.0 -64.1 -40.2 30.2 5.0 10.0 50 48 A X H X S+ 0 0 104 -4,-1.9 4,-2.9 2,-0.2 -2,-0.2 0.908 111.3 46.4 -61.9 -44.2 31.9 8.3 8.9 51 49 A L H X S+ 0 0 23 -4,-2.4 4,-2.3 2,-0.2 6,-0.2 0.890 111.1 51.7 -66.6 -41.0 32.2 9.4 12.6 52 50 A I H X>S+ 0 0 44 -4,-2.4 5,-1.6 2,-0.2 4,-0.8 0.910 115.8 42.1 -63.2 -41.2 33.5 6.0 13.7 53 51 A N H <5S+ 0 0 85 -4,-2.3 3,-0.3 3,-0.2 -2,-0.2 0.932 117.5 44.9 -72.7 -43.9 36.2 6.1 11.0 54 52 A E H <5S+ 0 0 153 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.771 123.6 34.2 -71.9 -27.9 37.2 9.7 11.4 55 53 A R H <5S- 0 0 143 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.403 103.7-121.5-109.5 3.4 37.3 9.7 15.2 56 54 A R T <5 - 0 0 192 -4,-0.8 2,-0.2 -3,-0.3 -3,-0.2 0.948 46.2-174.2 56.6 54.3 38.6 6.1 15.8 57 55 A L < - 0 0 24 -5,-1.6 2,-0.5 -6,-0.2 -1,-0.2 -0.537 20.8-155.5 -87.7 148.8 35.5 5.1 17.8 58 56 A N > - 0 0 87 -2,-0.2 3,-2.5 3,-0.1 7,-0.3 -0.980 12.2-147.0-123.0 116.5 35.0 1.8 19.7 59 57 A X T 3 S+ 0 0 80 -2,-0.5 -1,-0.1 1,-0.3 6,-0.1 0.684 99.6 60.0 -57.9 -16.1 31.4 0.7 20.4 60 58 A X T 3 S+ 0 0 158 4,-0.0 2,-0.6 5,-0.0 -1,-0.3 0.544 85.8 90.2 -89.1 -7.0 32.5 -0.9 23.6 61 59 A N S <> S- 0 0 68 -3,-2.5 4,-2.2 1,-0.1 5,-0.2 -0.808 71.3-147.9 -91.5 122.2 33.8 2.4 24.9 62 60 A A H > S+ 0 0 53 -2,-0.6 4,-2.3 1,-0.2 -1,-0.1 0.844 96.4 50.4 -58.2 -40.4 31.0 4.2 26.9 63 61 A E H > S+ 0 0 127 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.895 109.4 50.7 -66.3 -41.4 32.2 7.7 25.9 64 62 A D H > S+ 0 0 34 -6,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.901 112.8 47.3 -62.9 -40.1 32.3 6.8 22.2 65 63 A R H X S+ 0 0 116 -4,-2.2 4,-2.9 -7,-0.3 -2,-0.2 0.901 109.8 52.6 -66.4 -41.3 28.8 5.5 22.5 66 64 A K H X S+ 0 0 115 -4,-2.3 4,-2.5 2,-0.2 -2,-0.2 0.936 109.1 50.5 -59.3 -46.3 27.6 8.6 24.3 67 65 A F H X S+ 0 0 35 -4,-2.5 4,-2.3 1,-0.2 -2,-0.2 0.948 112.7 45.3 -56.6 -49.9 29.1 10.7 21.6 68 66 A L H X S+ 0 0 4 -4,-2.2 4,-2.7 1,-0.2 -1,-0.2 0.900 111.3 53.0 -64.1 -38.3 27.3 8.7 18.9 69 67 A Q H X S+ 0 0 78 -4,-2.9 4,-2.2 1,-0.2 -1,-0.2 0.899 109.8 48.9 -63.6 -40.0 24.1 8.7 20.8 70 68 A Q H X S+ 0 0 92 -4,-2.5 4,-1.9 2,-0.2 -1,-0.2 0.889 113.3 46.4 -66.4 -40.6 24.2 12.5 21.1 71 69 A E H X S+ 0 0 25 -4,-2.3 4,-3.1 -5,-0.2 -2,-0.2 0.895 111.0 52.3 -70.0 -38.6 24.9 13.0 17.4 72 70 A X H X S+ 0 0 14 -4,-2.7 4,-2.3 2,-0.2 -2,-0.2 0.950 108.4 50.6 -60.9 -48.6 22.1 10.5 16.4 73 71 A D H < S+ 0 0 77 -4,-2.2 4,-0.4 1,-0.2 -1,-0.2 0.929 114.8 43.7 -55.3 -47.1 19.6 12.4 18.6 74 72 A K H >< S+ 0 0 86 -4,-1.9 3,-1.1 1,-0.2 5,-0.4 0.934 111.7 54.3 -64.1 -43.8 20.6 15.7 16.9 75 73 A F H 3< S+ 0 0 14 -4,-3.1 3,-0.2 1,-0.2 6,-0.2 0.836 118.2 33.1 -57.9 -39.0 20.7 14.1 13.4 76 74 A L T 3< S+ 0 0 7 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.245 93.1 98.2-104.6 12.6 17.1 12.8 13.7 77 75 A S S < S- 0 0 49 -3,-1.1 -1,-0.1 -4,-0.4 -2,-0.1 0.712 96.6-105.2 -76.9 -24.6 15.6 15.6 15.8 78 76 A G S S+ 0 0 21 1,-0.6 2,-0.1 -4,-0.4 -3,-0.1 0.188 87.6 112.1 115.4 -14.8 13.9 17.8 13.2 79 77 A E S S- 0 0 98 -5,-0.4 2,-0.7 1,-0.1 -1,-0.6 -0.399 86.0 -89.8 -85.0 167.8 16.6 20.4 13.5 80 78 A D 0 0 162 1,-0.2 -1,-0.1 -2,-0.1 -5,-0.0 -0.708 360.0 360.0 -78.2 115.1 19.1 21.2 10.7 81 79 A Y 0 0 98 -2,-0.7 -1,-0.2 -6,-0.2 -6,-0.1 0.944 360.0 360.0 -70.4 360.0 21.9 18.8 11.5