==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 13-APR-04 1T0Y . COMPND 2 MOLECULE: TUBULIN FOLDING COFACTOR B; . SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; . AUTHOR B.L.LYTLE,F.C.PETERSON,S.H.QUI,M.LUO,B.F.VOLKMAN, . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5699.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 67.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 23.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 242 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -61.7 -20.1 1.9 -6.8 2 2 A T - 0 0 108 22,-0.0 2,-0.6 21,-0.0 0, 0.0 -0.745 360.0-134.5 -87.9 136.0 -17.7 1.2 -3.9 3 3 A E + 0 0 101 -2,-0.4 21,-2.6 2,-0.0 22,-1.0 -0.796 27.0 176.9 -98.5 126.3 -14.2 0.5 -5.1 4 4 A V E -A 23 0A 67 -2,-0.6 2,-0.4 19,-0.3 71,-0.1 -0.979 11.0-160.6-129.4 141.3 -12.5 -2.4 -3.5 5 5 A Y E -A 22 0A 4 17,-3.0 17,-3.0 -2,-0.4 2,-0.5 -0.951 14.8-132.6-125.1 140.5 -9.1 -3.8 -4.2 6 6 A D E -A 21 0A 56 -2,-0.4 70,-2.8 15,-0.3 71,-1.0 -0.812 30.2-176.4 -98.2 131.0 -7.7 -7.2 -3.4 7 7 A L E -Ab 20 77A 2 13,-3.0 13,-2.2 -2,-0.5 2,-0.5 -0.856 30.8-142.4-126.4 156.1 -4.3 -7.5 -1.9 8 8 A E E -Ab 19 78A 58 69,-2.0 71,-2.3 -2,-0.3 2,-0.4 -0.994 31.4-153.8-110.7 118.2 -1.7 -9.9 -0.7 9 9 A I E +Ab 18 79A 2 9,-3.5 9,-2.6 -2,-0.5 2,-0.3 -0.801 16.8 176.2 -98.0 134.3 -0.2 -8.5 2.4 10 10 A T E - b 0 80A 34 69,-2.8 71,-3.1 -2,-0.4 2,-0.3 -0.892 3.7-175.6-127.0 160.9 3.3 -9.3 3.5 11 11 A T E - b 0 81A 16 3,-0.6 71,-0.2 -2,-0.3 37,-0.0 -0.937 33.5-126.8-148.3 166.2 5.3 -8.0 6.4 12 12 A N S S+ 0 0 30 69,-0.9 70,-0.1 -2,-0.3 -1,-0.1 0.793 110.9 51.0 -85.1 -33.3 8.7 -8.5 7.6 13 13 A A S S+ 0 0 65 68,-0.2 2,-0.3 75,-0.1 -1,-0.1 0.797 110.5 54.3 -75.8 -30.8 7.6 -9.4 11.1 14 14 A T - 0 0 41 1,-0.1 -3,-0.6 2,-0.1 25,-0.0 -0.790 59.9-163.3-105.7 147.3 5.2 -12.1 9.8 15 15 A D + 0 0 164 -2,-0.3 -1,-0.1 -5,-0.1 -3,-0.1 0.159 69.9 91.7-111.6 16.6 6.1 -14.9 7.4 16 16 A F S S- 0 0 131 2,-0.0 2,-0.2 -5,-0.0 -2,-0.1 -0.940 70.9-141.7-116.6 111.7 2.5 -15.5 6.5 17 17 A P - 0 0 55 0, 0.0 2,-0.5 0, 0.0 -7,-0.2 -0.511 17.1-152.8 -68.5 136.4 1.1 -13.7 3.5 18 18 A M E -A 9 0A 62 -9,-2.6 -9,-3.5 -2,-0.2 2,-0.6 -0.959 3.5-155.4-118.6 122.4 -2.5 -12.5 4.0 19 19 A E E +A 8 0A 138 -2,-0.5 2,-0.3 -11,-0.3 -11,-0.2 -0.842 30.0 147.3 -97.2 126.7 -4.9 -12.1 1.2 20 20 A K E -A 7 0A 110 -13,-2.2 -13,-3.0 -2,-0.6 2,-0.4 -0.988 41.4-126.6-154.5 152.4 -7.7 -9.7 1.8 21 21 A K E -A 6 0A 106 -2,-0.3 -15,-0.3 -15,-0.3 54,-0.0 -0.826 30.9-179.8-102.4 140.1 -9.8 -7.3 -0.1 22 22 A Y E -A 5 0A 22 -17,-3.0 -17,-3.0 -2,-0.4 2,-0.4 -0.882 36.0 -87.5-134.8 163.7 -10.1 -3.7 1.1 23 23 A P E > -A 4 0A 56 0, 0.0 3,-0.9 0, 0.0 -19,-0.3 -0.637 25.0-159.7 -77.2 128.0 -11.9 -0.5 0.1 24 24 A A T 3 S+ 0 0 3 -21,-2.6 45,-2.5 -2,-0.4 44,-0.4 0.633 88.7 68.7 -80.3 -13.1 -9.8 1.5 -2.4 25 25 A G T 3 S+ 0 0 54 -22,-1.0 -1,-0.2 43,-0.2 2,-0.1 0.560 88.1 82.2 -81.5 -8.7 -11.8 4.6 -1.5 26 26 A M S < S- 0 0 80 -3,-0.9 42,-2.6 1,-0.1 43,-0.3 -0.422 88.4 -95.6 -90.6 170.9 -10.3 4.7 1.9 27 27 A S B >> -E 67 0B 30 40,-0.2 4,-1.5 -2,-0.1 3,-1.0 -0.467 24.0-119.5 -83.5 156.9 -6.9 6.2 2.9 28 28 A L H 3> S+ 0 0 1 38,-0.7 4,-3.3 35,-0.4 5,-0.3 0.836 112.5 69.1 -60.4 -33.2 -3.6 4.3 3.2 29 29 A N H 3> S+ 0 0 70 35,-0.3 4,-1.1 1,-0.2 -1,-0.3 0.784 100.7 45.6 -58.7 -30.2 -3.6 5.4 6.8 30 30 A D H <> S+ 0 0 36 -3,-1.0 4,-2.1 2,-0.2 -1,-0.2 0.915 112.3 50.6 -76.4 -46.0 -6.6 3.1 7.4 31 31 A L H X S+ 0 0 2 -4,-1.5 4,-1.6 1,-0.2 -2,-0.2 0.919 114.9 42.9 -57.6 -48.8 -5.1 0.2 5.5 32 32 A K H X S+ 0 0 10 -4,-3.3 4,-3.3 2,-0.2 -1,-0.2 0.837 109.5 57.3 -70.3 -31.0 -1.8 0.5 7.4 33 33 A K H X S+ 0 0 98 -4,-1.1 4,-1.5 -5,-0.3 -2,-0.2 0.845 105.3 52.5 -64.9 -34.0 -3.8 1.0 10.7 34 34 A K H X S+ 0 0 96 -4,-2.1 4,-1.0 2,-0.2 -2,-0.2 0.908 113.5 42.9 -62.3 -42.5 -5.4 -2.3 9.9 35 35 A L H X S+ 0 0 9 -4,-1.6 4,-3.3 1,-0.2 5,-0.4 0.895 109.5 57.0 -70.2 -42.8 -1.9 -3.7 9.5 36 36 A E H X S+ 0 0 12 -4,-3.3 4,-1.9 1,-0.2 -1,-0.2 0.795 103.6 56.2 -56.6 -32.4 -0.7 -1.7 12.7 37 37 A L H < S+ 0 0 150 -4,-1.5 -1,-0.2 2,-0.2 -2,-0.2 0.869 113.9 37.7 -69.9 -37.5 -3.4 -3.6 14.5 38 38 A V H < S+ 0 0 90 -4,-1.0 -2,-0.2 -3,-0.4 -1,-0.1 0.896 126.5 34.9 -82.9 -41.4 -2.1 -7.0 13.5 39 39 A V H < S- 0 0 37 -4,-3.3 -3,-0.2 -5,-0.1 -2,-0.2 0.780 96.7-131.7 -87.5 -27.2 1.7 -6.2 13.7 40 40 A G < + 0 0 62 -4,-1.9 -4,-0.1 -5,-0.4 -3,-0.1 0.506 61.8 133.0 87.8 2.9 1.5 -3.8 16.7 41 41 A T - 0 0 11 -6,-0.3 -1,-0.3 1,-0.1 2,-0.2 -0.242 51.9-123.0 -79.8 171.4 3.6 -1.3 14.9 42 42 A T > - 0 0 93 -3,-0.1 4,-0.8 -2,-0.0 43,-0.1 -0.698 30.8 -94.2-113.1 172.2 2.9 2.5 14.7 43 43 A V T 4 S+ 0 0 55 -2,-0.2 3,-0.4 1,-0.2 -2,-0.0 0.860 118.5 35.3 -59.5 -48.6 2.4 4.7 11.6 44 44 A D T 4 S+ 0 0 130 1,-0.2 -1,-0.2 3,-0.1 -3,-0.0 0.811 118.3 52.4 -80.0 -27.5 5.9 6.2 11.1 45 45 A S T 4 S+ 0 0 34 1,-0.1 39,-3.3 39,-0.1 40,-0.7 0.532 99.1 73.0 -84.8 -9.1 7.6 3.1 12.2 46 46 A M E < -C 83 0A 0 -4,-0.8 2,-0.4 -3,-0.4 37,-0.2 -0.928 69.3-164.6-113.1 112.5 5.7 1.0 9.7 47 47 A R E -C 82 0A 70 35,-3.0 35,-2.8 -2,-0.7 2,-0.5 -0.774 6.7-148.0-101.6 138.9 6.8 1.4 6.2 48 48 A I E -C 81 0A 1 -2,-0.4 13,-1.9 33,-0.2 2,-0.4 -0.933 11.9-171.6-112.3 121.9 4.6 0.3 3.3 49 49 A Q E -CD 80 60A 56 31,-3.6 31,-2.9 -2,-0.5 2,-0.6 -0.901 14.8-140.6-111.9 138.8 6.2 -0.9 0.1 50 50 A L E -CD 79 59A 10 9,-2.9 8,-2.4 -2,-0.4 9,-1.2 -0.882 12.1-168.8-108.9 122.2 4.2 -1.6 -3.0 51 51 A F E -CD 78 57A 61 27,-2.7 27,-2.2 -2,-0.6 6,-0.3 -0.927 26.5-124.1-105.0 129.2 4.9 -4.5 -5.3 52 52 A D - 0 0 32 4,-3.2 24,-0.1 -2,-0.5 26,-0.1 -0.145 22.4-107.9 -70.1 168.6 3.0 -4.4 -8.5 53 53 A G S S+ 0 0 36 1,-0.2 -1,-0.1 22,-0.1 24,-0.0 0.745 117.3 55.6 -70.0 -24.5 0.8 -7.2 -9.7 54 54 A D S S- 0 0 127 2,-0.1 -1,-0.2 1,-0.0 -3,-0.0 0.980 122.8 -92.2 -70.4 -58.5 3.4 -8.1 -12.3 55 55 A D S S+ 0 0 127 1,-0.4 -2,-0.0 23,-0.0 23,-0.0 -0.015 86.3 102.3 174.8 -52.4 6.4 -8.6 -10.0 56 56 A Q S S- 0 0 99 -5,-0.1 -4,-3.2 1,-0.1 2,-0.5 -0.105 70.9-112.1 -65.8 152.7 8.4 -5.4 -9.6 57 57 A L E -D 51 0A 76 -6,-0.3 -6,-0.3 1,-0.2 -1,-0.1 -0.713 25.5-169.9 -81.9 126.5 8.5 -3.0 -6.7 58 58 A K E - 0 0 118 -8,-2.4 2,-0.3 -2,-0.5 -1,-0.2 0.879 48.2 -87.7 -86.5 -43.8 7.0 0.3 -7.8 59 59 A G E -D 50 0A 28 -9,-1.2 -9,-2.9 0, 0.0 2,-0.4 -0.985 52.6 -46.6 165.1-160.2 7.9 2.3 -4.8 60 60 A E E -D 49 0A 100 -2,-0.3 -11,-0.2 -11,-0.2 3,-0.0 -0.832 36.9-160.9-104.8 139.1 6.9 3.3 -1.4 61 61 A L + 0 0 20 -13,-1.9 -1,-0.2 -2,-0.4 -12,-0.1 0.877 31.8 147.0 -78.9 -94.0 3.4 4.5 -0.7 62 62 A T + 0 0 54 1,-0.2 2,-0.8 -14,-0.1 -1,-0.1 0.330 40.1 110.5 79.5 -3.7 3.4 6.4 2.5 63 63 A D + 0 0 81 1,-0.1 -35,-0.4 2,-0.1 3,-0.2 -0.872 25.7 158.3-106.7 108.8 0.7 8.8 1.4 64 64 A G + 0 0 8 -2,-0.8 -35,-0.3 -36,-0.2 -1,-0.1 0.181 58.4 88.2-111.7 14.1 -2.5 8.2 3.2 65 65 A A S S+ 0 0 97 -38,-0.1 2,-0.2 2,-0.1 -1,-0.1 0.637 91.1 52.0 -80.9 -16.4 -3.8 11.7 2.4 66 66 A K S S- 0 0 85 -3,-0.2 -38,-0.7 1,-0.1 2,-0.3 -0.478 97.7 -93.9-107.8-178.4 -5.2 10.2 -0.8 67 67 A S B > -E 27 0B 47 -40,-0.2 4,-2.4 -2,-0.2 -40,-0.2 -0.655 30.1-117.6 -95.0 157.4 -7.4 7.3 -1.4 68 68 A L T 4>S+ 0 0 1 -42,-2.6 5,-2.7 -44,-0.4 6,-0.5 0.764 119.6 52.9 -63.3 -25.7 -5.9 3.9 -2.3 69 69 A K T >45S+ 0 0 129 -45,-2.5 3,-0.9 -43,-0.3 -1,-0.2 0.906 109.0 47.6 -75.7 -43.4 -7.7 4.3 -5.6 70 70 A D T 345S+ 0 0 114 -46,-0.4 -2,-0.2 1,-0.3 -1,-0.2 0.828 109.2 54.8 -68.2 -31.3 -6.1 7.7 -6.3 71 71 A L T 3<5S- 0 0 37 -4,-2.4 -1,-0.3 -47,-0.2 -2,-0.2 0.633 111.7-128.0 -73.8 -13.7 -2.8 6.2 -5.3 72 72 A G T < 5 + 0 0 19 -3,-0.9 -3,-0.2 -5,-0.2 -2,-0.1 0.919 57.8 148.6 65.2 44.2 -3.4 3.6 -7.9 73 73 A V < + 0 0 0 -5,-2.7 -4,-0.1 -49,-0.1 -5,-0.1 0.929 31.5 174.5 -72.7 -44.0 -2.8 0.7 -5.6 74 74 A R - 0 0 147 -6,-0.5 3,-0.5 2,-0.1 2,-0.2 0.227 32.3 -61.2 63.2 175.7 -5.3 -1.4 -7.4 75 75 A D S S+ 0 0 109 1,-0.2 -68,-0.2 -70,-0.1 -22,-0.1 -0.587 110.9 38.3 -93.7 156.5 -6.2 -5.1 -7.0 76 76 A G S S+ 0 0 44 -70,-2.8 2,-0.2 1,-0.3 -1,-0.2 0.640 88.1 130.6 80.1 16.2 -3.9 -8.0 -7.4 77 77 A Y E -b 7 0A 23 -71,-1.0 -69,-2.0 -3,-0.5 2,-0.6 -0.637 56.1-129.4-100.8 157.0 -1.1 -6.1 -5.8 78 78 A R E -bC 8 51A 123 -27,-2.2 -27,-2.7 -2,-0.2 2,-0.7 -0.936 17.5-159.2-112.2 121.3 1.1 -7.1 -3.0 79 79 A I E -bC 9 50A 0 -71,-2.3 -69,-2.8 -2,-0.6 2,-0.6 -0.886 5.7-163.3-105.7 117.7 1.5 -4.8 -0.1 80 80 A H E -bC 10 49A 34 -31,-2.9 -31,-3.6 -2,-0.7 2,-0.4 -0.881 1.6-165.4-104.4 121.5 4.6 -5.2 1.9 81 81 A A E -bC 11 48A 0 -71,-3.1 -69,-0.9 -2,-0.6 2,-0.4 -0.835 5.3-167.4-103.3 141.9 4.8 -3.7 5.3 82 82 A V E - C 0 47A 9 -35,-2.8 -35,-3.0 -2,-0.4 2,-0.6 -0.997 17.8-136.3-132.9 133.5 8.0 -3.5 7.1 83 83 A D E + C 0 46A 24 -2,-0.4 -37,-0.2 -37,-0.2 5,-0.2 -0.798 22.1 177.0 -87.8 120.5 8.6 -2.6 10.7 84 84 A V > + 0 0 74 -39,-3.3 3,-1.2 -2,-0.6 -1,-0.2 0.729 68.2 70.8 -98.0 -23.1 11.5 -0.2 10.9 85 85 A T T 3 S+ 0 0 103 -40,-0.7 -1,-0.1 1,-0.3 -39,-0.1 0.822 101.7 46.5 -67.2 -31.0 11.5 0.4 14.7 86 86 A G T 3 S- 0 0 64 -41,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.508 111.4-122.9 -87.5 -4.7 12.8 -3.1 15.4 87 87 A G < + 0 0 55 -3,-1.2 2,-0.3 1,-0.3 -3,-0.1 0.354 63.1 142.6 82.7 -5.9 15.4 -2.7 12.6 88 88 A N + 0 0 71 -5,-0.2 -1,-0.3 1,-0.2 -5,-0.2 -0.525 5.9 128.9 -73.6 124.1 14.2 -5.7 10.8 89 89 A E 0 0 162 -2,-0.3 -1,-0.2 1,-0.2 -5,-0.1 0.219 360.0 360.0-148.6 3.3 14.2 -5.5 7.0 90 90 A D 0 0 191 -3,-0.1 -1,-0.2 -78,-0.0 -78,-0.0 -0.730 360.0 360.0-163.1 360.0 16.1 -8.8 6.3