==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DYE-BINDING PROTEIN 20-JUL-11 3T0V . COMPND 2 MOLECULE: IMMUNOGLOBULIN VARIABLE LAMBDA DOMAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR R.STANFIELD,N.SENUTOVITCH,S.BHATTACHARYYA,G.RULE,I.A.WILSON, . 113 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6158.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 72 63.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 5.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 41 36.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 2 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X 0 0 188 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 151.7 26.7 4.7 6.3 2 2 A P - 0 0 74 0, 0.0 100,-0.1 0, 0.0 101,-0.1 -0.264 360.0-144.9 -58.3 145.7 24.0 6.2 4.2 3 3 A V S S+ 0 0 57 98,-0.4 2,-0.4 99,-0.1 99,-0.1 0.731 87.4 63.5 -83.7 -28.6 24.6 6.3 0.4 4 4 A L B S-a 102 0A 2 97,-0.6 99,-0.6 85,-0.1 2,-0.6 -0.854 80.7-143.6 -98.0 135.7 22.7 9.6 0.1 5 5 A T E -B 23 0B 96 18,-2.8 18,-3.2 -2,-0.4 2,-0.2 -0.900 17.8-163.9-107.0 118.2 24.3 12.5 1.9 6 6 A Q E -B 22 0B 26 -2,-0.6 16,-0.2 16,-0.2 82,-0.0 -0.638 26.3 -90.9 -99.7 158.2 22.0 15.1 3.4 7 7 A S - 0 0 19 14,-1.7 -1,-0.1 -2,-0.2 3,-0.1 -0.222 47.9-101.6 -52.5 148.2 22.5 18.7 4.7 8 8 A P - 0 0 114 0, 0.0 13,-0.1 0, 0.0 -1,-0.1 -0.199 61.2 -60.2 -64.8 166.8 23.4 19.2 8.4 9 9 A S - 0 0 97 95,-0.1 2,-0.3 96,-0.1 98,-0.2 -0.097 59.1-163.1 -48.0 143.4 20.7 20.3 10.8 10 11 A V E -e 107 0C 43 96,-2.3 98,-2.5 -3,-0.1 2,-0.3 -0.943 7.0-164.1-132.9 155.0 19.0 23.6 10.0 11 12 A S E +e 108 0C 64 -2,-0.3 2,-0.3 96,-0.2 98,-0.2 -0.912 11.2 165.2-130.5 159.4 16.9 26.1 12.0 12 13 A G E -e 109 0C 9 96,-1.9 98,-2.8 -2,-0.3 3,-0.1 -0.972 32.5-114.3-159.6 169.0 14.6 29.0 11.3 13 14 A T > - 0 0 44 -2,-0.3 3,-2.1 96,-0.2 66,-0.2 -0.665 59.3 -70.0 -98.3 163.6 12.0 31.2 12.9 14 15 A P T 3 S+ 0 0 72 0, 0.0 66,-0.2 0, 0.0 -1,-0.1 -0.258 122.1 26.0 -58.3 137.0 8.4 31.1 11.6 15 16 A G T 3 S+ 0 0 51 64,-2.1 63,-0.6 1,-0.4 65,-0.1 0.165 96.8 114.1 98.7 -16.6 8.0 32.6 8.2 16 17 A Q < - 0 0 112 -3,-2.1 63,-2.7 62,-0.2 2,-0.4 -0.250 63.6-120.2 -81.3 171.7 11.5 31.9 7.1 17 18 A K - 0 0 131 60,-0.2 2,-0.3 61,-0.2 60,-0.2 -0.934 24.2-172.7-114.4 137.7 12.7 29.5 4.3 18 19 A V E - C 0 76B 7 58,-2.2 58,-3.1 -2,-0.4 2,-0.4 -0.959 8.8-154.3-124.0 149.6 14.9 26.5 4.8 19 20 A T E - C 0 75B 48 -2,-0.3 2,-0.4 56,-0.2 56,-0.2 -0.991 4.2-161.2-122.5 131.5 16.5 24.2 2.1 20 21 A I E - C 0 74B 0 54,-2.8 54,-2.3 -2,-0.4 2,-0.3 -0.933 13.7-148.7-109.0 132.7 17.5 20.6 2.8 21 22 A F E - C 0 73B 119 -2,-0.4 -14,-1.7 52,-0.2 2,-0.4 -0.760 13.5-170.0-106.0 152.7 19.9 19.0 0.4 22 23 A a E -BC 6 72B 1 50,-2.7 50,-2.4 -2,-0.3 2,-0.5 -0.907 10.1-167.3-140.3 105.8 20.3 15.4 -0.7 23 24 A S E +BC 5 71B 55 -18,-3.2 -18,-2.8 -2,-0.4 48,-0.2 -0.839 18.8 151.1-102.6 130.3 23.4 14.4 -2.7 24 25 A G - 0 0 17 46,-3.3 2,-0.3 -2,-0.5 46,-0.1 -0.145 32.7-106.0-125.4-138.8 23.7 11.1 -4.5 25 26 A S > > - 0 0 43 -2,-0.1 5,-1.6 44,-0.1 3,-1.3 -0.857 40.9 -80.8-150.6-179.8 25.4 9.7 -7.6 26 27 A S T 3 5S+ 0 0 75 -2,-0.3 5,-0.3 1,-0.3 43,-0.0 0.706 123.1 60.4 -63.3 -20.7 24.8 8.5 -11.1 27 27AA S T 3 5S+ 0 0 38 3,-0.1 67,-2.9 66,-0.1 68,-0.3 0.594 120.7 11.0 -85.5 -13.6 23.6 5.1 -9.7 28 27BA N T X>5S+ 0 0 1 -3,-1.3 4,-1.5 65,-0.2 3,-0.7 0.449 127.5 21.7-126.9 -89.1 20.7 6.6 -7.7 29 28 A V T 345S+ 0 0 0 1,-0.2 -3,-0.1 41,-0.2 42,-0.1 0.732 105.8 74.8 -67.5 -20.3 19.2 10.1 -7.8 30 29 A E T 34 - 0 0 76 -2,-0.4 3,-1.9 4,-0.3 45,-0.1 -0.632 47.7 -79.7 -91.5 155.1 8.1 13.2 13.9 41 40 A P T 3 S+ 0 0 113 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.292 116.5 7.3 -55.5 137.1 9.6 11.6 17.0 42 41 A G T 3 S+ 0 0 93 1,-0.2 2,-0.3 -3,-0.1 -3,-0.0 0.648 111.9 104.5 68.7 17.1 8.0 8.3 17.8 43 42 A T S < S- 0 0 70 -3,-1.9 -1,-0.2 3,-0.0 3,-0.1 -0.929 77.7-101.6-130.8 149.4 5.9 8.3 14.5 44 43 A T - 0 0 84 -2,-0.3 -4,-0.3 1,-0.1 2,-0.1 -0.466 46.7-103.7 -68.2 141.8 6.2 6.5 11.2 45 44 A P - 0 0 54 0, 0.0 2,-0.4 0, 0.0 -6,-0.2 -0.420 37.4-153.2 -69.2 141.2 7.8 8.5 8.4 46 45 A K E -G 38 0C 122 -8,-2.6 -8,-2.8 -2,-0.1 2,-0.4 -0.914 19.0-108.8-118.6 144.0 5.3 9.8 5.8 47 46 A V E +G 37 0C 52 -2,-0.4 -10,-0.3 -10,-0.2 3,-0.1 -0.544 37.9 165.7 -74.3 124.9 5.8 10.7 2.2 48 47 A L E + 0 0 13 -12,-3.3 8,-2.4 -2,-0.4 2,-0.4 0.767 69.5 24.0-101.8 -41.0 5.7 14.5 1.5 49 48 A I E +GH 36 55C 0 -13,-1.6 -13,-2.3 6,-0.2 -1,-0.3 -0.981 65.6 179.5-129.1 138.2 7.2 14.5 -2.0 50 49 A Y E > + H 0 54C 83 4,-2.6 4,-2.6 -2,-0.4 3,-0.4 -0.922 64.1 24.5-132.2 161.6 7.3 11.8 -4.7 51 50 A N T 4 S- 0 0 72 -2,-0.3 2,-2.2 1,-0.3 -1,-0.2 0.905 124.9 -69.2 51.0 47.9 8.7 11.6 -8.2 52 51 A D T 4 S+ 0 0 37 -18,-2.7 -1,-0.3 1,-0.2 21,-0.2 -0.246 128.4 15.9 74.1 -50.9 11.2 14.4 -7.5 53 52 A D T 4 S+ 0 0 83 -2,-2.2 2,-0.5 -3,-0.4 12,-0.3 0.288 87.2 117.4-143.2 12.4 8.7 17.3 -7.2 54 53 A R E < -H 50 0C 139 -4,-2.6 -4,-2.6 10,-0.1 2,-0.4 -0.760 55.3-135.5 -93.1 129.9 5.2 16.0 -6.8 55 54 A R E -H 49 0C 104 -2,-0.5 -6,-0.2 -6,-0.2 3,-0.1 -0.660 17.8-123.3 -83.5 134.3 3.4 16.9 -3.5 56 55 A S > - 0 0 26 -8,-2.4 3,-2.2 -2,-0.4 -1,-0.1 -0.312 49.8 -73.7 -67.4 159.0 1.4 14.2 -1.7 57 56 A S T 3 S+ 0 0 134 1,-0.3 -1,-0.2 -2,-0.0 0, 0.0 -0.297 122.2 17.9 -57.3 133.7 -2.2 15.0 -1.1 58 57 A G T 3 S+ 0 0 79 1,-0.3 -1,-0.3 -3,-0.1 -2,-0.1 0.298 88.7 132.2 87.8 -10.7 -2.6 17.5 1.7 59 58 A V < - 0 0 24 -3,-2.2 -1,-0.3 -11,-0.1 -4,-0.1 -0.669 60.7-117.2 -79.6 124.3 1.0 18.8 1.5 60 59 A P > - 0 0 52 0, 0.0 3,-1.9 0, 0.0 -4,-0.1 -0.210 16.6-120.6 -57.1 146.1 1.2 22.6 1.5 61 60 A D T 3 S+ 0 0 131 1,-0.3 16,-0.1 -6,-0.1 -2,-0.0 0.647 106.1 78.9 -64.7 -16.2 2.7 24.3 -1.6 62 61 A R T 3 S+ 0 0 45 16,-0.1 15,-2.8 14,-0.1 2,-0.6 0.620 79.2 80.8 -71.8 -9.5 5.3 25.9 0.6 63 62 A F E < +D 76 0B 5 -3,-1.9 2,-0.4 13,-0.2 13,-0.2 -0.891 67.4 179.4 -91.2 121.1 7.0 22.4 0.4 64 63 A S E -D 75 0B 48 11,-2.6 11,-3.0 -2,-0.6 2,-0.4 -0.982 13.5-162.0-130.7 126.0 8.9 22.3 -2.9 65 64 A G E +D 74 0B 4 -2,-0.4 2,-0.3 -12,-0.3 9,-0.2 -0.815 16.1 168.8-102.7 145.6 11.0 19.4 -4.2 66 65 A S E -D 73 0B 58 7,-2.3 7,-2.4 -2,-0.4 2,-0.3 -0.979 15.9-159.2-149.4 164.0 13.6 19.7 -6.9 67 66 A K E +D 72 0B 55 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.994 9.8 173.8-148.6 139.7 16.4 17.7 -8.5 68 67 A S E > -D 71 0B 93 3,-3.0 3,-2.4 -2,-0.3 2,-0.1 -0.955 64.8 -43.5-146.8 122.5 19.4 18.6 -10.7 69 68 A G T 3 S- 0 0 44 -2,-0.3 -44,-0.1 1,-0.3 0, 0.0 -0.376 124.8 -20.7 58.1-124.5 22.1 16.1 -11.7 70 69 A T T 3 S+ 0 0 43 -46,-0.1 -46,-3.3 -2,-0.1 2,-0.4 0.105 123.4 90.0-100.9 19.9 22.9 14.0 -8.7 71 70 A S E < -CD 23 68B 58 -3,-2.4 -3,-3.0 -48,-0.2 2,-0.3 -0.935 49.6-178.5-122.3 139.7 21.6 16.6 -6.3 72 71 A A E -CD 22 67B 3 -50,-2.4 -50,-2.7 -2,-0.4 2,-0.3 -0.931 4.9-168.4-130.4 156.4 18.1 17.0 -4.8 73 72 A S E -CD 21 66B 20 -7,-2.4 -7,-2.3 -2,-0.3 2,-0.5 -0.992 17.2-152.5-144.8 155.7 16.6 19.5 -2.4 74 73 A L E -CD 20 65B 0 -54,-2.3 -54,-2.8 -2,-0.3 2,-0.5 -0.992 18.3-163.6-124.4 117.5 13.5 20.1 -0.3 75 74 A A E -CD 19 64B 12 -11,-3.0 -11,-2.6 -2,-0.5 2,-0.6 -0.896 3.8-163.5-105.2 128.9 12.7 23.8 0.3 76 75 A I E -CD 18 63B 0 -58,-3.1 -58,-2.2 -2,-0.5 3,-0.3 -0.933 12.4-173.1-112.8 105.9 10.3 24.7 3.1 77 76 A S + 0 0 47 -15,-2.8 -60,-0.2 -2,-0.6 -61,-0.2 -0.549 65.5 25.4 -90.1 161.4 9.0 28.2 2.7 78 77 A G S S- 0 0 30 -63,-0.6 -1,-0.2 -2,-0.2 -61,-0.2 0.918 90.7-142.5 52.7 51.7 6.9 30.0 5.2 79 78 A L - 0 0 3 -63,-2.7 -64,-2.1 -3,-0.3 2,-0.3 -0.087 19.5-166.7 -50.1 134.4 8.2 27.8 8.1 80 79 A R > - 0 0 136 -66,-0.2 3,-2.4 -3,-0.1 4,-0.2 -0.889 33.5-112.6-122.5 156.8 5.6 26.9 10.7 81 80 A S G > S+ 0 0 84 -2,-0.3 3,-1.7 1,-0.3 28,-0.2 0.856 115.8 61.6 -57.1 -34.9 6.2 25.3 14.2 82 81 A E G 3 S+ 0 0 100 1,-0.3 -1,-0.3 -3,-0.0 -3,-0.0 0.556 89.0 73.0 -69.8 -6.6 4.5 22.1 13.0 83 82 A D G < + 0 0 3 -3,-2.4 2,-0.5 2,-0.0 -1,-0.3 0.532 65.0 116.4 -83.3 -9.0 7.3 21.7 10.4 84 83 A E < + 0 0 74 -3,-1.7 2,-0.3 -4,-0.2 24,-0.2 -0.507 48.0 103.8 -65.0 117.0 9.8 20.8 13.1 85 84 A A E S- I 0 107C 1 22,-1.0 22,-2.8 -2,-0.5 2,-0.4 -0.957 74.9 -79.4-174.6 174.2 10.8 17.2 12.1 86 85 A D E -FI 39 106C 48 -47,-2.5 -47,-2.7 -2,-0.3 2,-0.4 -0.865 41.6-156.2 -96.2 134.6 13.4 15.0 10.6 87 86 A Y E -FI 38 105C 0 18,-2.5 18,-2.1 -2,-0.4 2,-0.4 -0.945 9.3-170.7-117.7 132.4 13.3 14.9 6.8 88 87 A Y E -F 37 0C 55 -51,-2.2 -51,-2.9 -2,-0.4 2,-0.3 -0.963 12.5-146.8-123.7 138.8 14.7 12.0 4.7 89 88 A a E -F 36 0C 0 -2,-0.4 13,-2.2 -53,-0.2 2,-0.3 -0.705 17.2-167.3 -96.6 157.4 15.3 11.6 1.0 90 89 A L E +FJ 35 101C 9 -55,-1.9 -55,-2.4 -2,-0.3 2,-0.3 -0.998 12.6 161.5-146.2 136.6 14.9 8.3 -0.7 91 90 A S E -FJ 34 100C 0 9,-2.0 9,-2.8 -2,-0.3 2,-0.3 -0.988 40.2-105.3-150.8 153.9 15.9 6.9 -4.1 92 91 A W E - J 0 99C 62 -59,-0.5 2,-0.5 -2,-0.3 7,-0.2 -0.596 30.8-150.3 -73.4 140.1 16.4 3.6 -5.9 93 92 A D E >> - J 0 98C 4 5,-2.8 5,-1.5 -2,-0.3 4,-1.3 -0.960 8.0-164.8-116.5 117.8 20.1 2.7 -6.4 94 93 A D T 45S+ 0 0 97 -67,-2.9 -1,-0.1 -2,-0.5 -66,-0.1 0.751 88.4 47.9 -76.1 -24.4 20.8 0.5 -9.4 95 94 A S T 45S+ 0 0 92 -68,-0.3 -1,-0.2 1,-0.1 -67,-0.1 0.933 118.9 36.9 -78.2 -50.5 24.3 -0.5 -8.3 96 95 A L T 45S- 0 0 104 2,-0.2 -2,-0.2 -69,-0.1 -1,-0.1 0.663 101.5-134.5 -76.5 -15.6 23.5 -1.5 -4.8 97 95AA N T <5 + 0 0 126 -4,-1.3 2,-0.3 1,-0.2 -3,-0.2 0.952 66.9 99.0 60.0 50.4 20.2 -2.9 -5.9 98 95BA G E