==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 27-APR-04 1T3O . COMPND 2 MOLECULE: CARBON STORAGE REGULATOR; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR L.M.I.KOHARUDIN,T.GEORGIOU,C.KLEANTHOUS,R.GEOFFREY, . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6425.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 45.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 16.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 18 21.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -9 A H 0 0 218 0, 0.0 3,-0.1 0, 0.0 4,-0.0 0.000 360.0 360.0 360.0 126.1 13.6 25.3 1.8 2 -8 A S - 0 0 127 2,-0.0 2,-0.0 0, 0.0 0, 0.0 0.971 360.0 -12.1 57.9 82.8 11.9 24.0 5.0 3 -7 A S S S+ 0 0 103 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.183 95.1 105.8 71.8-179.3 9.6 21.9 2.9 4 -6 A G + 0 0 88 1,-0.3 2,-0.4 -3,-0.1 -1,-0.1 0.635 60.6 122.7 81.4 13.9 9.4 22.4 -0.8 5 -5 A H - 0 0 155 3,-0.0 2,-0.6 -4,-0.0 -1,-0.3 -0.928 69.3-120.4-111.7 133.0 11.4 19.1 -1.0 6 -4 A I - 0 0 146 -2,-0.4 3,-0.1 1,-0.2 42,-0.1 -0.610 23.7-173.7 -77.0 114.3 10.1 16.1 -3.0 7 -3 A E - 0 0 126 -2,-0.6 -1,-0.2 1,-0.3 41,-0.1 0.171 40.2-127.5 -95.6 17.9 9.8 13.2 -0.5 8 -2 A G - 0 0 35 39,-0.1 -1,-0.3 2,-0.0 2,-0.3 -0.234 23.1 -79.4 81.0-164.5 8.9 11.0 -3.3 9 -1 A R - 0 0 162 -3,-0.1 2,-0.4 38,-0.1 36,-0.0 -0.881 32.4-147.7-134.5 167.8 6.1 8.6 -3.8 10 0 A H E -A 46 0A 13 36,-1.5 36,-2.0 -2,-0.3 2,-0.6 -0.999 8.2-160.2-143.4 137.8 5.2 5.1 -2.5 11 1 A M E -A 45 0A 90 -2,-0.4 2,-0.5 34,-0.3 34,-0.3 -0.961 16.7-165.2-115.2 110.6 3.3 2.1 -3.7 12 2 A L E -A 44 0A 5 32,-2.7 32,-2.7 -2,-0.6 2,-0.4 -0.865 17.2-130.4-101.9 126.1 2.3 -0.1 -0.9 13 3 A V E -A 43 0A 40 -2,-0.5 2,-0.5 30,-0.3 30,-0.3 -0.590 17.8-166.5 -82.7 129.2 1.2 -3.6 -1.9 14 4 A L E -A 42 0A 33 28,-3.3 28,-3.2 -2,-0.4 2,-0.6 -0.960 17.6-137.6-111.0 126.0 -2.0 -5.0 -0.5 15 5 A S E +A 41 0A 34 -2,-0.5 2,-0.4 26,-0.3 26,-0.2 -0.744 35.9 156.0 -92.2 120.9 -2.5 -8.7 -1.0 16 6 A R > - 0 0 16 24,-0.9 3,-0.8 -2,-0.6 -2,-0.1 -0.954 29.2-163.9-146.9 118.1 -6.0 -9.6 -2.1 17 7 A K T 3 S+ 0 0 100 -2,-0.4 24,-0.1 1,-0.2 -2,-0.0 -0.000 81.8 76.1 -97.5 30.5 -6.8 -12.8 -4.0 18 8 A I T 3 S- 0 0 98 22,-0.1 -1,-0.2 2,-0.1 3,-0.1 0.404 88.7-137.5-119.7 -6.0 -10.1 -11.4 -5.1 19 9 A N < + 0 0 98 -3,-0.8 -2,-0.1 21,-0.2 14,-0.1 0.668 56.3 146.3 44.3 24.4 -9.0 -9.0 -7.8 20 10 A E - 0 0 94 1,-0.1 2,-0.4 22,-0.0 -1,-0.1 -0.221 50.5-108.8 -77.0 172.7 -11.6 -6.6 -6.3 21 11 A A - 0 0 56 -3,-0.1 2,-0.7 10,-0.1 10,-0.2 -0.843 19.5-138.5-109.4 142.9 -11.1 -2.9 -6.1 22 12 A I E +C 30 0B 33 8,-1.2 8,-1.3 -2,-0.4 2,-0.6 -0.880 23.7 172.3-107.3 110.5 -10.4 -0.9 -3.0 23 13 A Q E +C 29 0B 113 -2,-0.7 2,-0.6 6,-0.2 6,-0.2 -0.911 10.9 175.3-115.9 100.1 -12.3 2.4 -2.6 24 14 A I E >> -C 28 0B 28 4,-2.6 3,-2.0 -2,-0.6 4,-1.5 -0.929 63.5 -29.8-116.5 117.4 -11.7 3.8 0.9 25 15 A G T 34 S- 0 0 42 -2,-0.6 -1,-0.1 1,-0.3 4,-0.1 0.655 101.2 -81.1 61.8 18.6 -13.0 7.2 2.0 26 16 A A T 34 S+ 0 0 82 2,-0.2 -1,-0.3 1,-0.1 3,-0.1 0.646 120.6 92.2 61.9 15.3 -12.9 8.6 -1.5 27 17 A D T <4 S+ 0 0 37 -3,-2.0 2,-0.5 1,-0.3 -2,-0.2 0.830 88.8 27.9 -97.3 -52.7 -9.1 9.2 -1.0 28 18 A I E < +C 24 0B 14 -4,-1.5 -4,-2.6 18,-0.0 2,-0.3 -0.951 63.8 158.6-119.4 121.5 -7.7 6.0 -2.4 29 19 A E E +C 23 0B 96 -2,-0.5 2,-0.3 -6,-0.2 -6,-0.2 -0.938 26.2 103.4-141.7 121.5 -9.3 3.9 -5.1 30 20 A V E -C 22 0B 56 -8,-1.3 -8,-1.2 -2,-0.3 2,-0.3 -0.889 44.4-148.0 175.3 149.9 -7.4 1.4 -7.3 31 21 A K - 0 0 107 -2,-0.3 2,-0.9 -10,-0.2 13,-0.1 -0.816 16.5-178.7-132.5 98.0 -6.7 -2.2 -7.9 32 22 A V - 0 0 61 11,-0.4 2,-0.7 -2,-0.3 9,-0.0 -0.839 17.3-154.4 -95.6 104.5 -3.2 -2.7 -9.3 33 23 A I + 0 0 91 -2,-0.9 2,-0.3 9,-0.2 9,-0.2 -0.693 21.4 171.1 -89.6 116.2 -3.1 -6.5 -9.8 34 24 A A E -B 41 0A 38 7,-2.9 7,-1.8 -2,-0.7 2,-0.7 -0.834 36.8-106.3-124.9 158.3 0.5 -7.7 -9.7 35 25 A V E -B 40 0A 124 -2,-0.3 2,-0.2 5,-0.2 5,-0.2 -0.769 25.2-177.4 -91.8 114.2 2.1 -11.2 -9.7 36 26 A E - 0 0 62 3,-3.2 2,-2.0 -2,-0.7 3,-0.4 -0.329 64.4 -89.1 -99.9 46.9 3.6 -12.1 -6.3 37 27 A G S S- 0 0 70 1,-0.2 -1,-0.1 -2,-0.2 3,-0.0 -0.560 112.0 -7.0 79.4 -77.1 4.9 -15.4 -7.6 38 28 A D S S+ 0 0 159 -2,-2.0 2,-0.4 -3,-0.1 -1,-0.2 0.206 124.6 84.1-132.8 11.5 1.8 -17.3 -6.8 39 29 A Q - 0 0 62 -3,-0.4 -3,-3.2 2,-0.0 2,-0.5 -0.924 67.3-142.3-116.4 138.9 -0.1 -14.6 -4.9 40 30 A V E + B 0 35A 60 -2,-0.4 -24,-0.9 -5,-0.2 2,-0.3 -0.902 29.6 171.7-104.7 126.7 -2.2 -11.9 -6.6 41 31 A K E -AB 15 34A 5 -7,-1.8 -7,-2.9 -2,-0.5 -26,-0.3 -0.931 25.5-142.9-135.7 151.5 -2.0 -8.6 -4.9 42 32 A L E -A 14 0A 2 -28,-3.2 -28,-3.3 -2,-0.3 2,-0.3 -0.615 18.6-155.5-100.2 167.9 -3.1 -5.0 -5.5 43 33 A G E -A 13 0A 0 -30,-0.3 2,-0.5 -2,-0.2 -11,-0.4 -0.988 9.9-140.6-146.5 146.6 -1.1 -1.9 -4.5 44 34 A I E -A 12 0A 0 -32,-2.7 -32,-2.7 -2,-0.3 2,-0.5 -0.901 16.4-169.3-105.0 126.1 -1.8 1.7 -3.7 45 35 A D E -A 11 0A 64 -2,-0.5 -34,-0.3 -34,-0.3 -2,-0.0 -0.966 8.5-179.5-114.4 131.2 0.5 4.4 -5.0 46 36 A A E -A 10 0A 0 -36,-2.0 -36,-1.5 -2,-0.5 2,-1.0 -0.968 40.8-118.3-132.1 146.3 0.2 7.9 -3.7 47 37 A P S S- 0 0 93 0, 0.0 -40,-0.1 0, 0.0 -39,-0.1 0.051 71.4 -89.6 -70.6 30.4 2.1 11.2 -4.5 48 38 A K S S+ 0 0 34 -2,-1.0 3,-0.1 -38,-0.2 -41,-0.1 0.783 80.2 157.3 63.0 30.6 3.1 11.2 -0.8 49 39 A H - 0 0 49 1,-0.1 2,-0.3 3,-0.0 -1,-0.1 -0.060 51.4 -81.3 -64.6-177.6 -0.0 13.1 0.1 50 40 A I - 0 0 125 1,-0.0 2,-0.9 13,-0.0 -1,-0.1 -0.650 42.9-117.8 -89.2 145.8 -1.4 13.0 3.6 51 41 A D - 0 0 45 -2,-0.3 2,-0.2 -3,-0.1 8,-0.1 -0.762 28.8-155.1 -92.7 107.4 -3.6 10.0 4.5 52 42 A I + 0 0 90 -2,-0.9 2,-0.3 5,-0.0 6,-0.2 -0.575 20.9 165.4 -79.6 138.1 -7.1 11.2 5.3 53 43 A H - 0 0 56 -2,-0.2 2,-0.2 4,-0.1 4,-0.2 -0.952 20.7-155.2-141.8 166.1 -9.2 9.0 7.6 54 44 A R - 0 0 201 2,-0.6 2,-0.3 -2,-0.3 4,-0.1 -0.365 67.6 -20.0-117.6-155.5 -12.4 9.3 9.6 55 45 A K S S+ 0 0 203 -2,-0.2 -1,-0.2 2,-0.1 0, 0.0 -0.376 134.7 9.0 -55.6 113.3 -13.6 7.4 12.6 56 46 A E S S- 0 0 171 -2,-0.3 -2,-0.6 -3,-0.1 2,-0.1 0.667 107.7 -83.3 74.7 121.8 -11.4 4.3 12.3 57 47 A I - 0 0 83 1,-0.2 -4,-0.1 -4,-0.2 -2,-0.1 -0.298 39.1-169.0 -58.3 125.3 -8.6 4.4 9.7 58 48 A Y S S+ 0 0 42 -6,-0.2 -1,-0.2 -4,-0.1 -5,-0.1 0.565 77.7 44.9 -93.5 -9.7 -10.0 3.4 6.4 59 49 A L + 0 0 5 -7,-0.1 -6,-0.1 -8,-0.1 -2,-0.0 0.913 52.9 166.4 -96.0 -73.5 -6.7 3.0 4.6 60 50 A T + 0 0 72 1,-0.1 -1,-0.0 5,-0.0 -3,-0.0 0.598 62.9 87.9 57.7 16.7 -4.1 1.1 6.6 61 51 A I S >> S+ 0 0 4 3,-0.1 4,-1.0 2,-0.0 3,-0.7 0.827 97.6 17.1-101.9 -70.2 -2.1 0.9 3.4 62 52 A Q T 34 S+ 0 0 0 1,-0.2 -11,-0.1 2,-0.2 5,-0.1 0.722 121.1 63.6 -78.7 -18.7 0.2 3.9 3.1 63 53 A E T 34 S+ 0 0 44 1,-0.2 -1,-0.2 2,-0.1 -2,-0.0 0.665 105.2 46.5 -79.5 -15.1 -0.2 4.8 6.7 64 54 A E T <4 S+ 0 0 107 -3,-0.7 -1,-0.2 5,-0.0 -2,-0.2 0.719 131.7 22.0 -86.7 -28.6 1.5 1.5 7.4 65 55 A N >< + 0 0 14 -4,-1.0 3,-0.6 4,-0.1 -3,-0.2 0.750 62.8 141.8 -98.9 -97.0 4.1 2.4 4.8 66 56 A N T 3 S+ 0 0 29 1,-0.3 -3,-0.1 3,-0.1 -4,-0.1 0.485 96.9 9.8 65.8 6.4 4.5 6.1 3.9 67 57 A R T 3 S- 0 0 194 -5,-0.1 -1,-0.3 2,-0.0 -2,-0.1 0.123 139.2 -19.3-173.5 -60.2 8.3 5.4 3.7 68 58 A A < + 0 0 90 -3,-0.6 2,-0.3 -4,-0.2 -3,-0.1 -0.278 69.6 150.7-174.3 72.7 9.3 1.7 3.8 69 59 A A - 0 0 32 2,-0.0 2,-0.4 -7,-0.0 -4,-0.1 -0.707 32.8-143.2-101.6 162.8 6.9 -0.9 5.2 70 60 A A + 0 0 55 -2,-0.3 2,-0.4 -6,-0.1 3,-0.2 -0.841 30.6 160.9-130.0 95.1 6.7 -4.6 4.1 71 61 A L - 0 0 56 -2,-0.4 -58,-0.2 1,-0.2 -2,-0.0 -0.911 64.2 -3.1-115.9 142.5 3.2 -6.0 4.1 72 62 A S S S+ 0 0 47 -2,-0.4 -1,-0.2 1,-0.2 -58,-0.0 0.823 135.7 43.2 52.3 40.2 1.9 -9.2 2.3 73 63 A S S S- 0 0 57 -3,-0.2 -1,-0.2 -58,-0.0 -3,-0.1 0.103 81.4-150.6-168.9 -57.4 5.3 -9.8 0.8 74 64 A D - 0 0 89 3,-0.0 -4,-0.1 -3,-0.0 -3,-0.0 0.967 6.6-158.0 59.0 91.6 8.2 -9.3 3.2 75 65 A V S S- 0 0 114 1,-0.1 -5,-0.0 2,-0.1 -4,-0.0 0.981 72.1 -37.0 -61.8 -61.5 11.1 -8.2 1.1 76 66 A I - 0 0 53 1,-0.1 2,-1.0 6,-0.0 5,-0.1 0.514 68.1-178.9-140.1 -25.2 13.9 -9.2 3.4 77 67 A S S S+ 0 0 86 3,-0.1 2,-0.5 0, 0.0 3,-0.2 -0.355 72.7 35.4 54.0 -93.2 12.8 -8.4 6.9 78 68 A A S S+ 0 0 64 -2,-1.0 4,-0.0 1,-0.2 0, 0.0 -0.790 128.3 8.5 -93.1 128.3 15.9 -9.5 8.8 79 69 A L - 0 0 96 -2,-0.5 3,-0.4 1,-0.1 -1,-0.2 0.975 66.6-154.4 67.2 88.8 19.2 -8.7 7.1 80 70 A S S S+ 0 0 94 1,-0.3 -1,-0.1 -3,-0.2 -3,-0.1 0.576 95.8 47.6 -73.3 -10.0 18.4 -6.6 4.0 81 71 A S S S- 0 0 95 -5,-0.1 -1,-0.3 3,-0.0 3,-0.1 0.711 101.4-140.4 -95.1 -26.4 21.5 -7.9 2.3 82 72 A Q - 0 0 85 -3,-0.4 2,-0.5 1,-0.1 -3,-0.1 0.914 25.4-105.4 59.2 103.0 20.9 -11.5 3.1 83 73 A K 0 0 171 1,-0.2 -1,-0.1 -4,-0.0 -3,-0.0 -0.376 360.0 360.0 -68.6 108.5 24.3 -13.0 4.0 84 74 A K 0 0 237 -2,-0.5 -1,-0.2 -3,-0.1 -2,-0.1 0.624 360.0 360.0-121.0 360.0 25.3 -15.1 1.0