==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 28-JUL-11 3T5S . COMPND 2 MOLECULE: MACROPHAGE MIGRATION INHIBITORY FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: GIARDIA LAMBLIA; . AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (S . 97 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5493.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 71.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 14 14.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 9.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 30.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A S 0 0 66 0, 0.0 65,-2.9 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-164.7 -39.0 17.1 16.0 2 1 A M - 0 0 131 63,-0.2 2,-0.1 1,-0.2 38,-0.1 0.912 360.0-168.6 42.4 49.7 -37.6 20.6 15.9 3 2 A P + 0 0 0 0, 0.0 38,-2.2 0, 0.0 2,-0.3 -0.403 13.4 177.4 -76.4 142.8 -34.3 18.7 15.2 4 3 A C E -aB 41 64A 15 60,-2.1 60,-2.8 36,-0.2 2,-0.5 -0.988 17.7-166.0-148.6 128.8 -31.1 20.7 15.3 5 4 A A E -aB 42 63A 0 36,-2.2 38,-2.3 -2,-0.3 2,-0.5 -0.963 7.3-175.0-120.2 113.7 -27.4 19.7 14.9 6 5 A I E -aB 43 62A 33 56,-2.6 56,-2.8 -2,-0.5 2,-0.4 -0.940 12.5-159.3-108.5 121.6 -24.8 22.3 16.0 7 6 A V E -aB 44 61A 0 36,-2.4 38,-2.3 -2,-0.5 2,-0.5 -0.871 12.7-165.3-109.4 131.9 -21.2 21.2 15.2 8 7 A T E +aB 45 60A 25 52,-3.3 52,-3.2 -2,-0.4 2,-0.3 -0.982 28.2 158.5-112.8 121.2 -18.0 22.5 16.9 9 8 A T E -aB 46 59A 0 36,-1.7 38,-2.0 -2,-0.5 50,-0.2 -0.941 48.8-143.3-143.1 154.9 -15.0 21.5 14.8 10 9 A N + 0 0 29 48,-1.3 49,-0.1 -2,-0.3 47,-0.1 0.320 61.4 130.6-101.1 6.9 -11.4 22.5 14.3 11 10 A A - 0 0 5 47,-0.4 2,-0.7 1,-0.1 36,-0.2 -0.206 63.2-122.0 -54.6 148.1 -11.7 21.7 10.5 12 11 A D + 0 0 98 73,-0.2 2,-0.3 34,-0.1 -1,-0.1 -0.901 49.7 156.4 -94.1 109.3 -10.4 24.3 8.0 13 12 A F - 0 0 48 -2,-0.7 2,-0.2 4,-0.0 72,-0.0 -0.976 41.0-123.7-135.7 147.9 -13.5 25.1 5.8 14 13 A T > - 0 0 81 -2,-0.3 4,-2.1 1,-0.1 5,-0.1 -0.523 36.0-107.9 -79.0 163.3 -14.5 28.0 3.7 15 14 A K H > S+ 0 0 67 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.855 121.3 52.8 -61.0 -39.6 -18.0 29.7 4.5 16 15 A D H > S+ 0 0 128 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.892 108.0 50.5 -68.0 -36.1 -19.4 28.2 1.3 17 16 A Q H > S+ 0 0 104 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.883 110.1 50.2 -64.3 -39.8 -18.3 24.8 2.4 18 17 A A H X S+ 0 0 9 -4,-2.1 4,-2.4 2,-0.2 -2,-0.2 0.897 110.3 50.5 -64.3 -43.5 -19.8 25.2 5.8 19 18 A D H X S+ 0 0 90 -4,-2.4 4,-2.6 2,-0.2 5,-0.2 0.931 109.5 49.7 -58.2 -48.8 -23.1 26.3 4.1 20 19 A A H X S+ 0 0 44 -4,-2.4 4,-2.7 1,-0.2 5,-0.3 0.947 112.1 49.7 -52.1 -51.7 -23.2 23.3 1.9 21 20 A F H X S+ 0 0 0 -4,-2.4 4,-2.5 1,-0.2 -2,-0.2 0.903 111.3 47.9 -54.2 -45.9 -22.5 21.1 4.9 22 21 A C H X S+ 0 0 22 -4,-2.4 4,-2.0 2,-0.2 -1,-0.2 0.932 112.2 48.1 -66.1 -46.0 -25.3 22.7 6.9 23 22 A L H X S+ 0 0 136 -4,-2.6 4,-1.6 1,-0.2 3,-0.2 0.961 115.5 45.3 -59.3 -46.5 -27.9 22.4 4.1 24 23 A D H X S+ 0 0 81 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.834 110.2 54.1 -62.4 -40.3 -26.9 18.8 3.6 25 24 A M H X S+ 0 0 0 -4,-2.5 4,-2.3 -5,-0.3 -1,-0.2 0.839 105.1 56.1 -63.5 -32.2 -27.0 18.2 7.3 26 25 A G H X S+ 0 0 6 -4,-2.0 4,-1.1 -3,-0.2 -2,-0.2 0.908 107.3 46.6 -66.9 -42.7 -30.5 19.6 7.3 27 26 A Q H X S+ 0 0 58 -4,-1.6 4,-2.4 2,-0.2 -2,-0.2 0.897 112.0 53.0 -66.3 -37.6 -31.7 17.1 4.7 28 27 A V H X S+ 0 0 46 -4,-2.3 4,-2.4 1,-0.2 -2,-0.2 0.917 107.9 48.1 -63.2 -44.7 -30.0 14.3 6.7 29 28 A L H X S+ 0 0 4 -4,-2.3 4,-1.6 2,-0.2 6,-0.4 0.758 112.1 54.6 -64.0 -24.8 -31.8 15.2 10.0 30 29 A A H X S+ 0 0 15 -4,-1.1 4,-2.7 2,-0.2 5,-0.3 0.956 110.6 40.6 -72.1 -57.3 -35.0 15.2 7.9 31 30 A K H < S+ 0 0 87 -4,-2.4 3,-0.4 1,-0.2 -2,-0.2 0.984 117.0 51.4 -52.3 -58.2 -34.7 11.7 6.4 32 31 A E H < S+ 0 0 58 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.800 124.8 24.7 -53.9 -38.3 -33.5 10.4 9.8 33 32 A T H < S- 0 0 63 -4,-1.6 -1,-0.2 2,-0.2 -2,-0.2 0.554 92.4-133.0-104.3 -13.1 -36.4 12.0 11.9 34 33 A G < + 0 0 65 -4,-2.7 -3,-0.1 -3,-0.4 -4,-0.1 0.518 64.7 128.7 69.1 2.9 -39.2 12.2 9.2 35 34 A K S S- 0 0 14 -6,-0.4 -1,-0.3 -5,-0.3 -2,-0.2 -0.486 72.6 -88.1 -75.3 159.6 -39.9 15.8 10.3 36 35 A P > - 0 0 71 0, 0.0 3,-2.2 0, 0.0 4,-0.2 -0.446 27.3-118.6 -75.0 153.1 -39.9 18.1 7.3 37 36 A V G > S+ 0 0 92 1,-0.3 3,-2.3 2,-0.2 -8,-0.1 0.847 108.5 72.5 -54.5 -36.4 -36.8 19.9 6.1 38 37 A S G 3 S+ 0 0 86 1,-0.3 -1,-0.3 3,-0.0 -12,-0.0 0.635 99.7 46.4 -55.1 -18.6 -38.3 23.3 6.8 39 38 A Y G < S+ 0 0 135 -3,-2.2 2,-0.5 -13,-0.1 -1,-0.3 0.315 88.5 104.6-106.8 6.0 -37.9 22.6 10.6 40 39 A C < - 0 0 24 -3,-2.3 2,-0.4 -4,-0.2 -36,-0.2 -0.778 48.8-166.6 -98.2 129.3 -34.3 21.3 10.6 41 40 A M E +a 4 0A 120 -38,-2.2 -36,-2.2 -2,-0.5 2,-0.3 -0.903 8.7 175.2-110.9 136.2 -31.5 23.6 11.9 42 41 A A E +a 5 0A 23 -2,-0.4 2,-0.3 -38,-0.2 -36,-0.2 -0.990 2.1 176.4-136.7 145.5 -27.8 22.8 11.4 43 42 A G E -a 6 0A 19 -38,-2.3 -36,-2.4 -2,-0.3 2,-0.4 -0.980 13.5-163.2-142.6 151.9 -24.8 25.0 12.3 44 43 A V E +a 7 0A 27 -2,-0.3 2,-0.4 -38,-0.2 -36,-0.2 -0.996 13.2 177.8-134.0 135.3 -21.1 24.7 12.2 45 44 A R E -a 8 0A 122 -38,-2.3 -36,-1.7 -2,-0.4 2,-0.1 -0.997 27.7-114.0-138.2 144.2 -18.7 26.9 14.1 46 45 A K E +a 9 0A 115 -2,-0.4 2,-0.3 -38,-0.2 -36,-0.2 -0.411 36.8 165.5 -83.8 149.3 -14.9 26.9 14.3 47 46 A A - 0 0 25 -38,-2.0 2,-0.5 -36,-0.2 -2,-0.0 -0.978 41.0-114.8-151.2 151.6 -13.1 26.1 17.5 48 47 A D + 0 0 152 -2,-0.3 2,-0.3 2,-0.0 -38,-0.1 -0.810 53.4 169.2 -85.9 134.8 -9.5 25.2 18.5 49 48 A M - 0 0 44 -2,-0.5 2,-0.3 6,-0.2 -2,-0.0 -0.988 28.9-160.1-152.0 147.0 -9.8 21.7 19.8 50 49 A S - 0 0 83 -2,-0.3 2,-0.4 5,-0.1 5,-0.2 -0.959 0.4-168.6-126.9 153.6 -7.8 18.7 21.0 51 50 A F B > S-D 54 0B 62 3,-2.2 3,-1.0 -2,-0.3 5,-0.3 -0.963 70.5 -31.2-140.2 115.1 -8.8 15.0 21.3 52 51 A G T 3 S- 0 0 66 -2,-0.4 -2,-0.0 1,-0.2 0, 0.0 -0.540 124.8 -24.3 70.4-134.1 -6.3 12.9 23.1 53 52 A T T 3 S+ 0 0 157 -2,-0.2 2,-0.3 -3,-0.1 -1,-0.2 0.164 124.5 61.3-102.1 16.4 -2.8 14.1 22.7 54 53 A S B < -D 51 0B 32 -3,-1.0 -3,-2.2 2,-0.1 0, 0.0 -0.969 68.4-136.1-142.5 156.3 -3.2 15.9 19.3 55 54 A T + 0 0 105 -2,-0.3 -6,-0.2 -5,-0.2 3,-0.2 -0.051 57.8 143.7 -93.6 27.2 -5.1 18.8 17.8 56 55 A D - 0 0 101 -5,-0.3 -2,-0.1 1,-0.2 -46,-0.1 -0.280 67.4 -60.9 -67.3 163.3 -5.9 16.6 14.7 57 56 A L S S+ 0 0 54 -47,-0.1 31,-0.4 -48,-0.1 2,-0.3 -0.095 72.8 152.4 -50.5 125.8 -9.3 17.1 13.1 58 57 A C - 0 0 5 -3,-0.2 -48,-1.3 29,-0.1 -47,-0.4 -0.930 25.8-149.5-147.9 166.6 -12.1 16.3 15.5 59 58 A C E -Bc 9 92A 5 32,-2.4 34,-2.3 -2,-0.3 2,-0.4 -0.994 6.0-157.9-141.2 141.1 -15.8 17.4 15.9 60 59 A F E -Bc 8 93A 69 -52,-3.2 -52,-3.3 -2,-0.3 2,-0.4 -0.956 17.3-161.8-113.4 134.4 -18.3 17.8 18.8 61 60 A V E -Bc 7 94A 0 32,-2.5 34,-3.7 -2,-0.4 2,-0.7 -0.979 11.4-160.9-118.6 125.3 -22.0 17.7 17.9 62 61 A D E -Bc 6 95A 26 -56,-2.8 -56,-2.6 -2,-0.4 2,-0.4 -0.957 16.8-168.5 -95.9 113.9 -24.9 18.9 20.0 63 62 A F E -Bc 5 96A 15 32,-3.0 34,-2.8 -2,-0.7 2,-0.4 -0.894 2.5-169.7-101.7 131.7 -28.1 17.3 18.7 64 63 A Y E +Bc 4 97A 99 -60,-2.8 -60,-2.1 -2,-0.4 2,-0.3 -0.980 11.9 165.1-123.8 138.5 -31.5 18.6 19.9 65 64 A C - 0 0 21 32,-1.2 2,-0.8 -2,-0.4 -63,-0.2 -0.975 40.7-121.4-145.6 135.3 -35.0 17.1 19.5 66 65 A I 0 0 72 -65,-2.9 32,-0.1 -2,-0.3 -2,-0.0 -0.748 360.0 360.0 -73.1 110.6 -38.2 17.9 21.3 67 66 A G 0 0 99 31,-0.9 -1,-0.2 -2,-0.8 31,-0.1 0.333 360.0 360.0 154.1 360.0 -38.9 14.4 22.6 68 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 69 72 A K 0 0 149 0, 0.0 4,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 19.8 -33.6 3.7 18.7 70 73 A N >> + 0 0 84 1,-0.1 4,-1.5 2,-0.1 3,-1.2 0.620 360.0 81.5-110.0 -29.3 -30.6 6.1 18.2 71 74 A P H 3> S+ 0 0 101 0, 0.0 4,-1.8 0, 0.0 5,-0.2 0.653 87.6 72.7 -66.8 -6.5 -27.4 4.9 16.5 72 75 A S H 3> S+ 0 0 70 2,-0.2 4,-1.5 1,-0.1 -2,-0.1 0.913 100.2 42.9 -60.9 -46.2 -29.3 5.6 13.3 73 76 A I H <> S+ 0 0 17 -3,-1.2 4,-3.2 1,-0.2 5,-0.3 0.941 112.5 54.9 -66.9 -45.8 -28.9 9.3 13.9 74 77 A S H X S+ 0 0 37 -4,-1.5 4,-2.3 1,-0.2 -2,-0.2 0.840 110.1 42.8 -53.5 -47.2 -25.2 8.9 15.0 75 78 A A H X S+ 0 0 69 -4,-1.8 4,-2.5 2,-0.2 -1,-0.2 0.855 116.0 50.4 -70.1 -39.3 -24.0 7.1 11.8 76 79 A A H X S+ 0 0 33 -4,-1.5 4,-1.7 -5,-0.2 -2,-0.2 0.955 114.0 42.5 -63.3 -54.3 -26.0 9.5 9.7 77 80 A I H X S+ 0 0 1 -4,-3.2 4,-2.0 1,-0.2 -2,-0.2 0.932 117.7 47.9 -59.3 -45.0 -24.6 12.7 11.4 78 81 A T H X S+ 0 0 23 -4,-2.3 4,-2.8 -5,-0.3 -1,-0.2 0.892 108.9 52.0 -64.1 -45.1 -21.1 11.2 11.4 79 82 A G H X S+ 0 0 36 -4,-2.5 4,-2.3 2,-0.2 -1,-0.2 0.835 109.1 51.8 -60.8 -33.2 -21.2 10.2 7.8 80 83 A C H X S+ 0 0 9 -4,-1.7 4,-1.7 2,-0.2 -2,-0.2 0.929 110.6 47.8 -67.2 -43.0 -22.2 13.7 6.9 81 84 A L H X>S+ 0 0 0 -4,-2.0 4,-3.3 1,-0.2 5,-0.8 0.918 113.1 48.2 -62.3 -44.7 -19.3 15.1 8.8 82 85 A T H X5S+ 0 0 53 -4,-2.8 4,-1.0 1,-0.2 -1,-0.2 0.895 109.3 52.5 -62.8 -42.2 -16.9 12.7 7.2 83 86 A Q H <5S+ 0 0 84 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.843 122.0 31.0 -63.1 -35.2 -18.2 13.5 3.7 84 87 A H H <5S+ 0 0 60 -4,-1.7 -2,-0.2 -5,-0.1 -3,-0.2 0.870 134.7 20.0 -94.2 -38.9 -17.7 17.2 4.2 85 88 A F H <5S- 0 0 20 -4,-3.3 -3,-0.2 -5,-0.2 -73,-0.2 0.564 90.3-125.4-113.6 -15.2 -14.7 17.7 6.6 86 89 A K << + 0 0 78 -4,-1.0 -4,-0.2 -5,-0.8 -3,-0.1 0.607 49.8 163.1 79.3 15.8 -12.8 14.3 6.3 87 90 A V - 0 0 1 -6,-0.6 -1,-0.2 -9,-0.1 -29,-0.1 -0.376 43.5-115.3 -64.4 139.4 -12.9 13.7 10.1 88 91 A K > - 0 0 125 -31,-0.4 3,-2.0 1,-0.1 -1,-0.1 -0.582 22.8-125.6 -74.5 140.0 -12.2 10.2 11.2 89 92 A P G > S+ 0 0 76 0, 0.0 3,-1.1 0, 0.0 -1,-0.1 0.758 109.0 64.5 -59.5 -27.5 -15.4 8.8 12.9 90 93 A E G 3 S+ 0 0 121 1,-0.2 -2,-0.0 3,-0.0 -3,-0.0 0.481 98.7 56.5 -75.4 0.2 -13.4 7.9 16.0 91 94 A R G < S+ 0 0 35 -3,-2.0 -32,-2.4 -33,-0.0 2,-0.4 -0.041 88.5 93.3-117.2 32.2 -12.8 11.7 16.4 92 95 A V E < -c 59 0A 17 -3,-1.1 2,-0.4 -34,-0.2 -32,-0.2 -0.972 50.7-172.5-129.8 111.5 -16.5 12.6 16.5 93 96 A Y E -c 60 0A 145 -34,-2.3 -32,-2.5 -2,-0.4 2,-0.4 -0.909 6.5-163.2-102.9 138.5 -18.5 13.0 19.8 94 97 A I E -c 61 0A 37 -2,-0.4 2,-0.6 -34,-0.2 -32,-0.2 -0.976 5.6-156.1-122.9 130.5 -22.3 13.5 19.6 95 98 A S E -c 62 0A 35 -34,-3.7 -32,-3.0 -2,-0.4 2,-0.7 -0.921 9.5-149.7-107.2 118.6 -24.4 14.8 22.5 96 99 A F E -c 63 0A 64 -2,-0.6 2,-0.7 -34,-0.2 -32,-0.2 -0.797 13.9-176.5 -89.0 115.4 -28.1 13.9 22.4 97 100 A N E c 64 0A 61 -34,-2.8 -32,-1.2 -2,-0.7 -2,-0.0 -0.749 360.0 360.0-112.3 82.7 -30.2 16.6 24.2 98 101 A E 0 0 98 -2,-0.7 -31,-0.9 -34,-0.2 -1,-0.2 0.900 360.0 360.0 -99.6 360.0 -33.8 15.3 24.1