==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 07-MAY-04 1T6W . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN XP_346638; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR W.YANG,A.L.WILKINS,Y.YE,Z.-R.LIU,J.L.URBAUER,A.KEARNEY, . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6465.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 76.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 37 37.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 21 21.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 2 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 287 0, 0.0 2,-1.1 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 -30.7 6.9 13.0 -12.4 2 2 A D + 0 0 139 1,-0.2 90,-0.2 91,-0.0 0, 0.0 -0.670 360.0 138.2-100.0 78.9 6.8 13.2 -8.6 3 3 A S - 0 0 44 -2,-1.1 89,-0.2 88,-0.1 2,-0.2 0.955 47.5-132.6 -83.0 -74.9 6.9 9.6 -7.5 4 4 A G - 0 0 32 -3,-0.2 90,-2.0 89,-0.1 2,-0.3 -0.531 9.2-125.9 133.6 159.5 9.2 9.3 -4.5 5 5 A T E -a 94 0A 92 88,-0.2 2,-0.3 -2,-0.2 90,-0.2 -0.966 15.8-174.0-139.9 154.9 12.1 7.3 -3.1 6 6 A V E -a 95 0A 43 88,-1.9 90,-2.4 -2,-0.3 2,-0.5 -0.994 14.9-141.0-148.0 149.3 13.0 5.4 0.0 7 7 A W E +a 96 0A 177 -2,-0.3 2,-0.2 88,-0.2 90,-0.2 -0.948 31.4 151.6-117.7 131.5 16.0 3.7 1.5 8 8 A G E -a 97 0A 10 88,-2.2 90,-3.3 -2,-0.5 2,-0.4 -0.830 36.5-112.4-144.0-178.0 15.8 0.4 3.4 9 9 A A E > -a 98 0A 43 4,-0.5 3,-2.4 -2,-0.2 59,-0.5 -0.984 34.3-106.8-128.2 134.1 17.7 -2.7 4.4 10 10 A L T 3 S+ 0 0 71 88,-2.4 59,-0.2 -2,-0.4 3,-0.1 -0.294 108.2 20.7 -56.6 130.9 17.0 -6.3 3.4 11 11 A G T 3 S+ 0 0 34 57,-1.5 -1,-0.3 1,-0.4 2,-0.2 0.335 108.7 99.7 90.9 -7.2 15.6 -8.2 6.3 12 12 A H S < S- 0 0 104 -3,-2.4 56,-2.2 1,-0.2 -1,-0.4 -0.628 77.2 -96.6-107.9 167.6 14.6 -5.0 8.1 13 13 A G + 0 0 21 -2,-0.2 -4,-0.5 54,-0.2 -1,-0.2 0.062 39.7 170.5 -70.7-172.7 11.2 -3.3 8.4 14 14 A I E -F 65 0B 22 51,-0.7 51,-2.5 -6,-0.1 2,-0.5 -0.627 22.4-142.3 163.3 136.3 9.9 -0.5 6.2 15 15 A D E -F 64 0B 37 49,-0.2 2,-1.0 -2,-0.2 49,-0.2 -0.963 14.5-139.1-120.8 122.1 6.6 1.4 5.6 16 16 A L E -F 63 0B 2 47,-1.7 47,-1.0 -2,-0.5 2,-0.6 -0.659 23.4-155.4 -79.1 103.5 5.5 2.6 2.2 17 17 A D - 0 0 104 -2,-1.0 45,-0.1 45,-0.1 44,-0.1 -0.727 7.6-138.3 -87.7 122.3 4.0 6.1 2.8 18 18 A I > - 0 0 13 -2,-0.6 3,-0.7 1,-0.1 2,-0.1 -0.660 25.3-117.0 -79.9 119.9 1.5 7.3 0.3 19 19 A P T 3 S- 0 0 41 0, 0.0 -1,-0.1 0, 0.0 -15,-0.0 -0.337 87.1 -10.0 -60.1 131.0 2.0 11.0 -0.6 20 20 A N T 3 S+ 0 0 163 1,-0.2 2,-0.3 -2,-0.1 -2,-0.0 0.923 101.2 133.2 43.6 65.3 -1.0 13.2 0.4 21 21 A F < - 0 0 40 -3,-0.7 2,-0.3 39,-0.0 -1,-0.2 -0.991 37.8-167.8-142.7 149.4 -3.4 10.4 1.2 22 22 A Q - 0 0 149 -2,-0.3 2,-2.7 2,-0.0 5,-0.2 -0.861 18.0-145.8-142.9 104.5 -5.8 9.6 4.1 23 23 A M + 0 0 50 37,-0.3 38,-0.2 -2,-0.3 2,-0.1 -0.403 51.3 142.6 -68.8 75.2 -7.4 6.2 4.5 24 24 A T S > S- 0 0 55 -2,-2.7 3,-1.9 36,-0.1 -2,-0.0 -0.375 72.3 -78.2-105.8-173.5 -10.7 7.6 5.8 25 25 A D T 3 S+ 0 0 133 1,-0.3 58,-0.1 -2,-0.1 -2,-0.1 0.814 128.4 64.2 -55.8 -31.1 -14.4 6.6 5.4 26 26 A D T 3 S+ 0 0 114 -4,-0.1 57,-1.0 56,-0.1 2,-0.4 0.780 90.0 80.1 -64.1 -26.6 -14.2 8.4 2.0 27 27 A I E < +B 82 0A 10 -3,-1.9 55,-0.2 55,-0.2 3,-0.1 -0.714 49.1 161.8 -86.0 127.1 -11.7 5.7 0.9 28 28 A D E + 0 0 30 53,-2.7 16,-1.8 -2,-0.4 2,-0.5 0.751 63.8 33.3-112.3 -42.7 -13.3 2.4 -0.1 29 29 A E E +BC 81 43A 37 52,-1.4 52,-2.7 14,-0.2 2,-0.6 -0.947 56.9 178.9-126.5 117.3 -10.7 0.5 -2.2 30 30 A V E -BC 80 42A 0 12,-2.7 12,-3.1 -2,-0.5 2,-0.4 -0.928 10.6-172.5-116.9 107.6 -6.9 0.8 -1.6 31 31 A R E -BC 79 41A 61 48,-1.3 48,-1.8 -2,-0.6 2,-0.7 -0.858 14.0-160.9-105.4 134.8 -4.8 -1.4 -3.9 32 32 A W E +BC 78 40A 0 8,-1.7 7,-2.0 -2,-0.4 8,-1.1 -0.822 24.4 172.6-112.4 88.1 -1.0 -1.9 -3.5 33 33 A E E -BC 77 38A 63 44,-2.3 44,-2.7 -2,-0.7 2,-0.4 -0.766 15.4-171.4-102.1 146.4 0.2 -3.1 -6.9 34 34 A R E > - C 0 37A 65 3,-2.4 3,-1.3 -2,-0.3 2,-0.3 -0.965 58.7 -53.3-137.5 116.2 3.8 -3.6 -8.0 35 35 A G T 3 S- 0 0 79 40,-0.4 39,-0.0 -2,-0.4 -2,-0.0 -0.364 121.4 -18.7 58.1-116.3 4.7 -4.4 -11.6 36 36 A S T 3 S+ 0 0 121 -2,-0.3 2,-0.3 -3,-0.1 -1,-0.2 -0.265 125.0 72.0-116.5 43.4 2.6 -7.4 -12.6 37 37 A T E < S-C 34 0A 71 -3,-1.3 -3,-2.4 0, 0.0 2,-0.3 -0.986 72.2-118.4-152.9 159.8 1.7 -8.6 -9.1 38 38 A L E +C 33 0A 38 -2,-0.3 -5,-0.2 -5,-0.2 3,-0.1 -0.763 23.1 172.0-102.4 148.6 -0.4 -7.8 -6.1 39 39 A V E S- 0 0 9 -7,-2.0 12,-2.3 -2,-0.3 13,-0.4 0.675 72.6 -11.6-119.6 -43.5 0.9 -7.0 -2.6 40 40 A A E -CD 32 50A 2 -8,-1.1 -8,-1.7 10,-0.2 2,-0.5 -0.744 56.7-177.9-167.2 113.2 -2.1 -5.8 -0.6 41 41 A E E -CD 31 49A 29 8,-1.5 8,-1.9 -10,-0.3 2,-0.5 -0.945 7.7-167.4-120.6 113.5 -5.6 -4.8 -1.8 42 42 A F E -C 30 0A 48 -12,-3.1 -12,-2.7 -2,-0.5 2,-0.4 -0.874 6.0-174.3-102.8 123.6 -8.1 -3.6 0.7 43 43 A K E > -C 29 0A 64 -2,-0.5 3,-0.7 -14,-0.2 -14,-0.2 -0.957 33.0-129.9-119.7 133.7 -11.8 -3.4 -0.4 44 44 A R T 3 S+ 0 0 115 -16,-1.8 2,-0.8 -2,-0.4 -15,-0.1 0.797 107.8 70.8 -47.8 -28.9 -14.6 -1.9 1.7 45 45 A K T 3 S- 0 0 158 1,-0.2 -1,-0.3 -17,-0.1 -16,-0.0 -0.118 107.3-127.3 -82.4 39.4 -16.4 -5.1 0.8 46 46 A M S < S+ 0 0 141 -2,-0.8 -1,-0.2 -3,-0.7 -3,-0.1 0.161 78.1 97.9 41.9-166.2 -14.0 -7.0 3.1 47 47 A K - 0 0 173 -3,-0.1 -2,-0.1 -5,-0.1 -1,-0.1 0.974 58.8-176.3 55.0 63.6 -12.2 -10.0 1.8 48 48 A P - 0 0 79 0, 0.0 2,-0.5 0, 0.0 -6,-0.2 -0.117 26.2-113.2 -80.1-178.3 -8.8 -8.3 0.9 49 49 A F E -D 41 0A 91 -8,-1.9 -8,-1.5 3,-0.0 2,-0.7 -0.882 27.0-175.3-125.7 101.9 -5.8 -9.8 -0.8 50 50 A L E -D 40 0A 87 -2,-0.5 -10,-0.2 -10,-0.2 3,-0.1 -0.846 20.0-148.8 -98.1 111.0 -2.6 -10.1 1.3 51 51 A K S S- 0 0 100 -12,-2.3 2,-0.3 -2,-0.7 -1,-0.2 0.844 73.3 -41.9 -43.8 -39.5 0.3 -11.3 -0.8 52 52 A S > - 0 0 75 -13,-0.4 3,-1.9 -3,-0.1 -1,-0.2 -0.955 66.5 -78.3 179.1 166.0 1.6 -13.0 2.4 53 53 A G T 3 S+ 0 0 60 1,-0.3 -2,-0.1 -2,-0.3 -1,-0.0 0.606 111.8 83.3 -54.8 -10.6 2.2 -12.6 6.1 54 54 A A T 3 S+ 0 0 38 12,-0.1 12,-2.4 11,-0.1 13,-0.4 0.451 91.2 56.0 -74.9 2.1 5.2 -10.5 5.2 55 55 A F E < -G 65 0B 15 -3,-1.9 2,-0.3 10,-0.2 10,-0.2 -0.940 59.0-172.3-134.1 156.9 2.9 -7.5 4.8 56 56 A E E -G 64 0B 114 8,-1.1 8,-1.9 -2,-0.3 2,-1.0 -0.909 25.0-131.3-152.3 118.5 0.3 -5.7 6.9 57 57 A I E -G 63 0B 56 -2,-0.3 6,-0.2 6,-0.2 4,-0.2 -0.582 32.5-138.0 -74.0 101.6 -2.0 -2.9 5.7 58 58 A L > - 0 0 56 4,-1.4 3,-1.1 -2,-1.0 -1,-0.1 0.090 25.4-100.6 -50.6 170.0 -1.6 -0.2 8.3 59 59 A A T 3 S+ 0 0 89 1,-0.3 -1,-0.1 2,-0.2 -2,-0.1 0.755 122.9 57.2 -67.8 -25.1 -4.7 1.7 9.7 60 60 A N T 3 S- 0 0 73 -38,-0.1 -37,-0.3 1,-0.0 -1,-0.3 -0.070 127.5 -96.4 -97.1 33.2 -3.9 4.6 7.4 61 61 A G S < S+ 0 0 0 -3,-1.1 2,-0.2 1,-0.2 -2,-0.2 0.811 82.4 143.2 58.6 30.5 -4.0 2.4 4.2 62 62 A D - 0 0 3 -39,-0.1 -4,-1.4 -45,-0.1 2,-0.6 -0.479 53.4-114.0 -97.0 170.5 -0.2 2.1 4.4 63 63 A L E -FG 16 57B 0 -47,-1.0 -47,-1.7 -6,-0.2 2,-0.7 -0.924 23.6-164.3-110.1 119.2 2.0 -0.9 3.6 64 64 A K E -FG 15 56B 89 -8,-1.9 -8,-1.1 -2,-0.6 2,-0.3 -0.889 6.9-159.1-106.7 110.9 3.9 -2.5 6.5 65 65 A I E -FG 14 55B 0 -51,-2.5 -51,-0.7 -2,-0.7 -10,-0.2 -0.686 8.1-162.8 -89.4 138.5 6.8 -4.8 5.4 66 66 A K S S+ 0 0 132 -12,-2.4 2,-0.3 -2,-0.3 -1,-0.1 0.913 78.9 4.7 -84.3 -49.2 8.1 -7.4 7.9 67 67 A N S S- 0 0 91 -13,-0.4 -1,-0.3 -54,-0.1 -54,-0.2 -0.905 79.2-126.2-144.3 110.7 11.4 -8.3 6.3 68 68 A L + 0 0 1 -56,-2.2 -57,-1.5 -59,-0.5 2,-0.3 -0.139 36.0 171.5 -54.1 147.9 12.8 -6.5 3.2 69 69 A T >> - 0 0 62 -59,-0.2 3,-1.3 1,-0.1 4,-0.6 -0.944 48.3 -92.0-152.3 169.4 13.8 -8.7 0.3 70 70 A R G >4 S+ 0 0 170 -2,-0.3 3,-2.4 1,-0.3 27,-0.1 0.931 123.8 54.2 -51.3 -52.9 14.9 -8.4 -3.4 71 71 A D G 34 S+ 0 0 105 1,-0.3 -1,-0.3 -3,-0.1 -3,-0.0 0.722 103.6 59.1 -56.1 -21.6 11.3 -8.7 -4.7 72 72 A D G <4 S+ 0 0 6 -3,-1.3 2,-0.6 4,-0.0 -1,-0.3 0.638 84.8 94.1 -83.1 -14.9 10.5 -5.8 -2.4 73 73 A S << + 0 0 29 -3,-2.4 2,-0.3 -4,-0.6 23,-0.2 -0.695 69.9 54.6 -82.8 117.8 13.0 -3.6 -4.2 74 74 A G E S- E 0 95A 14 21,-2.1 21,-3.3 -2,-0.6 2,-0.5 -0.982 91.6 -35.8 156.9-166.3 11.4 -1.5 -6.9 75 75 A T E - E 0 94A 65 -2,-0.3 -40,-0.4 19,-0.2 2,-0.3 -0.798 49.3-157.7 -94.4 126.4 8.6 0.9 -7.7 76 76 A Y E - E 0 93A 2 17,-2.6 17,-2.1 -2,-0.5 2,-0.4 -0.762 2.1-155.6-103.0 148.4 5.2 0.5 -5.9 77 77 A N E -BE 33 92A 57 -44,-2.7 -44,-2.3 -2,-0.3 2,-0.5 -0.982 4.2-165.4-129.7 126.2 1.9 1.8 -7.1 78 78 A V E -BE 32 91A 0 13,-2.2 13,-2.1 -2,-0.4 2,-0.6 -0.919 3.0-168.1-112.0 132.7 -1.2 2.7 -5.1 79 79 A T E -BE 31 90A 12 -48,-1.8 -48,-1.3 -2,-0.5 2,-0.4 -0.880 10.3-164.6-121.0 96.9 -4.6 3.3 -6.5 80 80 A V E -BE 30 89A 2 9,-3.3 8,-3.8 -2,-0.6 9,-1.0 -0.693 7.9-169.6 -85.6 128.6 -7.0 4.8 -4.0 81 81 A Y E -BE 29 87A 33 -52,-2.7 -53,-2.7 -2,-0.4 -52,-1.4 -0.871 14.4-127.2-119.2 153.0 -10.7 4.6 -4.8 82 82 A S E > -B 27 0A 17 4,-2.0 3,-1.8 -2,-0.3 -55,-0.2 -0.279 35.9 -96.3 -88.2 175.4 -13.7 6.3 -3.3 83 83 A T T 3 S+ 0 0 78 -57,-1.0 -56,-0.1 1,-0.3 -1,-0.1 0.790 124.6 60.6 -62.7 -28.4 -17.0 4.7 -2.0 84 84 A N T 3 S- 0 0 145 2,-0.1 -1,-0.3 1,-0.0 -3,-0.0 0.514 121.1-109.2 -77.6 -4.5 -18.5 5.6 -5.3 85 85 A G S < S+ 0 0 60 -3,-1.8 2,-0.2 1,-0.3 -2,-0.1 0.781 75.1 134.1 81.6 27.9 -15.9 3.4 -7.0 86 86 A T - 0 0 77 1,-0.0 -4,-2.0 0, 0.0 2,-0.4 -0.650 64.5 -89.8-107.3 165.5 -14.1 6.3 -8.6 87 87 A R E + E 0 81A 204 -2,-0.2 -6,-0.2 -6,-0.2 3,-0.1 -0.604 46.0 165.4 -77.5 127.1 -10.3 7.1 -8.8 88 88 A I E - 0 0 89 -8,-3.8 2,-0.4 -2,-0.4 -7,-0.2 0.831 62.0 -1.5-104.1 -67.3 -9.1 9.1 -5.8 89 89 A L E - E 0 80A 30 -9,-1.0 -9,-3.3 2,-0.0 2,-0.6 -0.983 51.9-169.1-137.4 127.2 -5.3 9.1 -5.7 90 90 A N E + E 0 79A 107 -2,-0.4 2,-0.3 -11,-0.2 -11,-0.2 -0.930 22.2 170.8-115.7 106.7 -2.8 7.3 -7.9 91 91 A K E - E 0 78A 54 -13,-2.1 -13,-2.2 -2,-0.6 2,-0.4 -0.783 20.3-160.9-117.2 162.0 0.7 7.4 -6.5 92 92 A A E - E 0 77A 16 -2,-0.3 2,-0.3 -90,-0.2 -15,-0.2 -0.969 11.6-176.1-143.9 122.1 4.1 5.7 -7.3 93 93 A L E - E 0 76A 15 -17,-2.1 -17,-2.6 -2,-0.4 2,-0.7 -0.858 23.7-128.9-120.2 156.2 7.1 5.4 -5.0 94 94 A D E -aE 5 75A 49 -90,-2.0 -88,-1.9 -2,-0.3 2,-0.9 -0.899 19.7-167.6-106.8 110.7 10.6 4.0 -5.3 95 95 A L E -aE 6 74A 0 -21,-3.3 -21,-2.1 -2,-0.7 2,-0.6 -0.817 5.5-171.2-101.7 98.2 11.5 1.5 -2.6 96 96 A R E -a 7 0A 107 -90,-2.4 -88,-2.2 -2,-0.9 2,-0.6 -0.787 5.3-160.1 -92.8 121.8 15.3 0.9 -2.8 97 97 A I E -a 8 0A 5 -2,-0.6 2,-0.4 -90,-0.2 -88,-0.2 -0.897 11.3-139.4-107.2 116.4 16.5 -2.0 -0.5 98 98 A L E a 9 0A 110 -90,-3.3 -88,-2.4 -2,-0.6 -91,-0.0 -0.570 360.0 360.0 -74.2 124.2 20.1 -2.1 0.4 99 99 A E 0 0 162 -2,-0.4 -1,-0.2 -90,-0.2 -90,-0.0 0.882 360.0 360.0 -97.9 360.0 21.5 -5.7 0.3