==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATION 27-APR-93 1TFI . COMPND 2 MOLECULE: TRANSCRIPTIONAL ELONGATION FACTOR SII; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.QIAN,S.GOZANI,H.S.YOON,C.J.JEON,K.AGARWAL,M.A.WEISS . 50 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3875.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 42.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 28.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 258 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 55.1 1.9 11.5 9.4 2 2 A T - 0 0 124 2,-0.1 2,-0.1 0, 0.0 0, 0.0 -0.632 360.0-103.2-130.1-175.6 -0.1 8.6 8.1 3 3 A G S S+ 0 0 71 -2,-0.2 2,-0.2 2,-0.0 0, 0.0 -0.370 78.8 90.9-119.3 57.3 -0.1 5.0 9.5 4 4 A G - 0 0 32 -2,-0.1 2,-0.3 19,-0.1 19,-0.2 -0.788 64.0-115.8-135.8 178.1 2.0 2.9 7.1 5 5 A T E -A 22 0A 83 17,-1.8 17,-1.8 -2,-0.2 2,-0.7 -0.919 27.6-111.1-122.1 148.5 5.6 1.7 6.6 6 6 A Q E +A 21 0A 102 -2,-0.3 15,-0.2 15,-0.2 13,-0.0 -0.689 53.4 149.3 -79.9 116.2 8.1 2.3 3.8 7 7 A T - 0 0 37 13,-1.4 14,-0.2 -2,-0.7 -1,-0.2 0.697 33.7-156.9-117.3 -40.9 8.4 -1.0 2.1 8 8 A D + 0 0 59 12,-2.1 3,-0.1 2,-0.1 13,-0.1 0.970 47.6 129.1 53.3 65.2 9.1 -0.4 -1.6 9 9 A L + 0 0 76 1,-0.3 2,-0.3 11,-0.1 -1,-0.1 0.660 69.6 37.5-112.5 -36.2 7.8 -3.7 -3.0 10 10 A F S S- 0 0 57 10,-0.1 -1,-0.3 29,-0.1 10,-0.2 -0.897 79.7-128.9-119.2 149.0 5.6 -2.2 -5.7 11 11 A T - 0 0 62 -2,-0.3 7,-0.2 1,-0.1 29,-0.1 -0.452 30.3-103.7 -89.9 167.8 6.2 0.9 -7.9 12 12 A C - 0 0 13 5,-0.8 -1,-0.1 -2,-0.1 34,-0.1 -0.177 20.4-125.7 -80.1 178.7 3.8 3.7 -8.4 13 13 A G S S+ 0 0 63 3,-0.1 -1,-0.1 2,-0.0 33,-0.1 0.135 101.9 25.8-113.8 18.1 1.7 4.0 -11.5 14 14 A K S S+ 0 0 130 31,-0.1 -3,-0.0 3,-0.1 0, 0.0 0.473 121.7 39.9-137.7 -64.9 2.8 7.6 -12.2 15 15 A C S S- 0 0 33 2,-0.0 3,-0.1 1,-0.0 -2,-0.0 0.608 85.9-145.8 -70.9 -16.6 6.2 8.6 -10.8 16 16 A K + 0 0 168 1,-0.2 2,-0.2 2,-0.0 -3,-0.1 0.871 56.1 117.6 45.9 51.9 7.6 5.2 -11.7 17 17 A K S S- 0 0 102 2,-0.0 -5,-0.8 0, 0.0 -1,-0.2 -0.626 72.9-107.4-128.0-172.3 10.0 5.1 -8.6 18 18 A K S S+ 0 0 113 -2,-0.2 2,-0.3 -7,-0.2 -7,-0.1 -0.287 77.9 105.0-118.0 47.9 10.4 2.9 -5.5 19 19 A N + 0 0 63 2,-0.0 22,-1.5 -13,-0.0 23,-0.4 -0.588 43.9 134.9-129.4 71.2 9.1 5.0 -2.5 20 20 A C E - B 0 40A 0 -2,-0.3 -12,-2.1 20,-0.2 -13,-1.4 -0.893 39.7-149.9-117.8 145.5 5.7 3.4 -1.8 21 21 A T E -AB 6 39A 5 18,-2.8 18,-3.0 -2,-0.4 2,-0.3 -0.848 11.3-162.3-114.6 150.0 4.4 2.5 1.6 22 22 A Y E -AB 5 38A 48 -17,-1.8 -17,-1.8 -2,-0.3 2,-0.3 -0.928 5.7-160.4-134.9 159.4 2.0 -0.3 2.4 23 23 A T E - B 0 37A 46 14,-1.3 14,-1.6 -2,-0.3 2,-0.6 -0.958 13.0-142.5-135.8 150.5 -0.3 -1.2 5.2 24 24 A Q E + B 0 36A 89 -2,-0.3 2,-0.3 12,-0.2 12,-0.2 -0.913 33.6 159.9-123.0 101.3 -1.8 -4.6 6.1 25 25 A V E - B 0 35A 69 10,-1.5 10,-2.1 -2,-0.6 2,-0.3 -0.818 31.1-147.9-118.6 156.8 -5.4 -4.2 7.4 26 26 A Q - 0 0 66 -2,-0.3 6,-0.3 8,-0.3 5,-0.2 -0.647 31.8-118.5-130.8 74.5 -8.1 -6.8 7.7 27 27 A T S S- 0 0 76 -2,-0.3 5,-0.1 1,-0.1 -2,-0.0 0.363 82.2 -6.9 -13.7 121.4 -11.6 -5.1 7.2 28 28 A R S S+ 0 0 234 2,-0.1 3,-0.1 3,-0.0 -1,-0.1 0.923 125.3 4.7 40.1 93.0 -13.9 -5.5 10.2 29 29 A S S S- 0 0 74 1,-0.1 3,-0.2 2,-0.1 -3,-0.1 0.068 72.8-106.4 92.5 162.3 -12.3 -7.8 12.8 30 30 A A S S+ 0 0 68 1,-0.2 -1,-0.1 -5,-0.0 4,-0.1 0.090 116.0 61.7-104.7 18.0 -8.9 -9.6 13.2 31 31 A D S S+ 0 0 140 -5,-0.2 -1,-0.2 -3,-0.1 -2,-0.1 0.305 87.3 72.6-120.5 -2.7 -10.6 -13.0 12.4 32 32 A E S S- 0 0 95 -6,-0.3 -1,-0.1 -3,-0.2 0, 0.0 -0.744 103.7-119.8-114.3 75.3 -11.7 -11.8 8.9 33 33 A P - 0 0 92 0, 0.0 -2,-0.1 0, 0.0 -8,-0.1 0.491 32.2 -60.7 -45.0 158.2 -8.1 -12.0 7.5 34 34 A M - 0 0 94 -8,-0.1 2,-0.3 -4,-0.1 -8,-0.3 0.463 30.2-165.0 -26.9 152.7 -5.7 -9.4 5.9 35 35 A T E -B 25 0A 21 -10,-2.1 -10,-1.5 15,-0.2 2,-0.6 -0.972 16.1-144.5-142.9 132.6 -5.8 -7.2 2.8 36 36 A T E -B 24 0A 8 -2,-0.3 13,-2.6 -12,-0.2 14,-1.9 -0.934 17.8-177.5-112.1 118.1 -2.6 -5.6 1.5 37 37 A F E -BC 23 48A 77 -14,-1.6 -14,-1.3 -2,-0.6 2,-0.4 -0.803 11.9-152.3-108.2 151.2 -3.0 -2.1 -0.0 38 38 A V E -BC 22 47A 0 9,-3.1 9,-2.5 -2,-0.3 2,-0.4 -0.998 12.8-174.5-129.2 128.3 0.0 -0.2 -1.6 39 39 A V E -BC 21 46A 53 -18,-3.0 -18,-2.8 -2,-0.4 2,-0.4 -0.989 24.4-126.5-128.5 131.3 0.1 3.6 -1.6 40 40 A C E -B 20 0A 2 5,-2.9 4,-0.3 -2,-0.4 -20,-0.2 -0.626 9.6-157.4 -77.4 128.3 2.7 5.8 -3.3 41 41 A N S S+ 0 0 58 -22,-1.5 -1,-0.1 -2,-0.4 -21,-0.1 0.520 85.8 63.9 -81.1 -8.1 4.1 8.3 -0.8 42 42 A E S S- 0 0 59 -23,-0.4 -1,-0.1 3,-0.1 -22,-0.1 0.935 126.5 -8.0 -85.7 -52.8 5.0 10.5 -3.8 43 43 A C S S- 0 0 66 2,-0.1 -2,-0.1 0, 0.0 -1,-0.0 0.468 99.3-106.3-121.3 -16.2 1.9 11.6 -5.7 44 44 A G + 0 0 54 -4,-0.3 2,-0.5 1,-0.2 -3,-0.1 0.940 57.4 162.2 86.9 58.3 -0.5 9.5 -3.8 45 45 A N - 0 0 26 -5,-0.1 -5,-2.9 2,-0.0 2,-0.4 -0.956 17.3-174.7-108.4 123.7 -1.4 6.7 -6.3 46 46 A R E +C 39 0A 195 -2,-0.5 2,-0.3 -7,-0.2 -7,-0.2 -0.968 16.0 149.7-131.1 145.0 -2.9 3.8 -4.4 47 47 A W E -C 38 0A 82 -9,-2.5 -9,-3.1 -2,-0.4 2,-0.3 -0.894 34.0-109.2-153.2 176.8 -4.0 0.3 -5.4 48 48 A K E +C 37 0A 113 -2,-0.3 -11,-0.2 -11,-0.3 -2,-0.0 -0.760 22.3 176.9-120.1 166.7 -4.3 -3.2 -3.8 49 49 A F 0 0 130 -13,-2.6 -12,-0.2 -2,-0.3 -1,-0.1 0.574 360.0 360.0-126.8 -49.3 -2.6 -6.5 -3.9 50 50 A C 0 0 89 -14,-1.9 -15,-0.2 0, 0.0 -16,-0.1 0.076 360.0 360.0 117.7 360.0 -4.5 -8.5 -1.2