==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL 24-NOV-98 8TFV . COMPND 2 MOLECULE: PROTEIN (THANATIN); . SOURCE 2 SYNTHETIC: YES; . AUTHOR N.MANDARD,P.SODANO,H.LABBE,J.M.BONMATIN,P.BULET,C.HETRU, . 21 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2486.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 42.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 23.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-178.4 7.8 0.6 1.8 2 2 A S + 0 0 129 1,-0.5 2,-0.3 0, 0.0 0, 0.0 0.711 360.0 8.4-114.1 -71.1 8.6 -1.3 -1.4 3 3 A K - 0 0 187 2,-0.0 -1,-0.5 0, 0.0 0, 0.0 -0.880 61.5-150.4-116.8 148.6 6.4 -0.3 -4.4 4 4 A K - 0 0 178 -2,-0.3 0, 0.0 -3,-0.1 0, 0.0 -0.931 15.0-135.8-123.5 105.3 3.8 2.5 -4.5 5 5 A P - 0 0 104 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.289 26.3-157.5 -47.6 139.4 0.7 2.1 -6.7 6 6 A V - 0 0 108 1,-0.1 3,-0.1 3,-0.0 2,-0.0 -0.951 9.4-132.2-125.7 145.3 0.0 5.4 -8.6 7 7 A P - 0 0 76 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.016 48.4 -72.4 -72.0-170.1 -3.2 6.8 -10.2 8 8 A I - 0 0 109 13,-2.4 13,-2.7 2,-0.0 2,-0.4 -0.596 46.3-129.5 -88.2 152.3 -3.2 8.2 -13.7 9 9 A I E -A 20 0A 81 11,-0.3 2,-0.5 -2,-0.2 11,-0.3 -0.833 17.1-165.8-104.0 145.1 -1.6 11.5 -14.3 10 10 A Y E +A 19 0A 137 9,-3.2 9,-2.5 -2,-0.4 2,-0.5 -0.947 14.7 172.7-130.9 104.0 -3.5 14.1 -16.0 11 11 A a E -A 18 0A 57 -2,-0.5 2,-0.9 7,-0.3 7,-0.3 -0.970 25.9-158.5-119.9 131.6 -1.3 17.0 -17.1 12 12 A N E > > -A 17 0A 54 5,-3.0 3,-1.7 -2,-0.5 5,-0.8 -0.616 13.9-178.4-108.2 70.2 -2.4 19.8 -19.4 13 13 A R G > 5S+ 0 0 181 -2,-0.9 3,-1.9 1,-0.3 -1,-0.2 0.775 77.0 68.2 -32.0 -42.3 1.1 20.7 -20.5 14 14 A R G 3 5S+ 0 0 214 1,-0.3 -1,-0.3 -3,-0.2 -2,-0.0 0.922 116.1 21.9 -49.1 -57.3 -0.7 23.5 -22.4 15 15 A T G < 5S- 0 0 99 -3,-1.7 -1,-0.3 2,-0.2 -2,-0.2 -0.155 112.6-127.2-106.7 36.2 -1.7 25.4 -19.3 16 16 A G T < 5 + 0 0 54 -3,-1.9 2,-0.4 1,-0.1 -3,-0.3 0.634 65.8 126.5 17.5 59.6 1.2 23.5 -17.6 17 17 A K E < -A 12 0A 145 -5,-0.8 -5,-3.0 2,-0.0 2,-0.3 -0.989 34.9-175.4-140.4 127.3 -0.9 22.2 -14.8 18 18 A a E +A 11 0A 53 -2,-0.4 -7,-0.3 -7,-0.3 2,-0.2 -0.845 11.8 154.0-122.9 161.1 -1.1 18.5 -13.8 19 19 A Q E -A 10 0A 104 -9,-2.5 -9,-3.2 -2,-0.3 2,-0.3 -0.794 44.2 -75.5-158.3-167.0 -2.9 16.5 -11.4 20 20 A R E A 9 0A 136 -11,-0.3 -11,-0.3 -2,-0.2 -14,-0.0 -0.835 360.0 360.0-113.0 149.7 -4.1 12.9 -11.0 21 21 A M 0 0 145 -13,-2.7 -13,-2.4 -2,-0.3 -11,-0.1 -0.676 360.0 360.0-141.3 360.0 -7.0 11.1 -12.7