==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-JUN-04 1TOV . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN F53F4.3 IN CHROMOSOME V; . SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; . AUTHOR S.LI,J.FINLEY,Z.J.LIU,S.H.QIU,C.H.LUAN,M.CARSON,J.TSAO, . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6199.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 60.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 27.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 133 A N > 0 0 91 0, 0.0 4,-1.3 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -54.5 -13.5 17.3 53.4 2 134 A E H > + 0 0 93 1,-0.2 4,-2.1 2,-0.2 5,-0.1 0.817 360.0 55.8 -69.0 -34.4 -10.9 15.6 51.2 3 135 A S H > S+ 0 0 80 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.868 105.3 50.3 -68.4 -39.8 -8.3 18.2 52.0 4 136 A D H > S+ 0 0 84 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.870 111.6 49.4 -65.3 -39.4 -8.6 17.7 55.8 5 137 A K H X S+ 0 0 75 -4,-1.3 4,-2.0 2,-0.2 -2,-0.2 0.910 112.2 47.6 -63.1 -45.4 -8.2 14.0 55.3 6 138 A L H X S+ 0 0 105 -4,-2.1 4,-2.1 1,-0.2 -2,-0.2 0.880 114.6 46.6 -65.1 -39.6 -5.1 14.6 53.1 7 139 A N H X S+ 0 0 13 -4,-2.4 4,-1.6 2,-0.2 -2,-0.2 0.877 111.2 50.3 -69.4 -40.5 -3.6 17.0 55.6 8 140 A E H X S+ 0 0 128 -4,-2.4 4,-0.9 2,-0.2 -2,-0.2 0.882 113.1 47.5 -65.6 -38.1 -4.3 14.7 58.6 9 141 A E H >< S+ 0 0 143 -4,-2.0 3,-0.6 1,-0.2 4,-0.4 0.917 112.0 48.6 -67.3 -46.6 -2.6 11.8 56.8 10 142 A A H >< S+ 0 0 37 -4,-2.1 3,-0.5 1,-0.2 -1,-0.2 0.795 108.4 56.0 -63.7 -29.9 0.4 13.9 55.8 11 143 A A H >< S+ 0 0 15 -4,-1.6 3,-1.5 1,-0.2 -1,-0.2 0.739 84.7 81.8 -76.4 -25.1 0.8 15.2 59.3 12 144 A K T << S+ 0 0 68 -4,-0.9 -1,-0.2 -3,-0.6 -2,-0.1 0.784 101.2 35.2 -54.0 -34.5 1.1 11.7 61.0 13 145 A N T < S+ 0 0 133 -3,-0.5 2,-0.7 -4,-0.4 -1,-0.3 0.418 93.6 104.5-101.2 0.9 4.8 11.3 60.1 14 146 A I < + 0 0 7 -3,-1.5 2,-0.4 -4,-0.2 6,-0.0 -0.751 49.3 178.2 -88.8 115.7 5.7 15.0 60.6 15 147 A M > - 0 0 113 -2,-0.7 3,-2.1 21,-0.0 19,-0.3 -0.914 36.7-100.1-119.5 143.9 7.6 15.6 63.8 16 148 A V T 3 S+ 0 0 94 -2,-0.4 19,-0.2 1,-0.2 3,-0.1 -0.361 111.7 32.6 -56.4 133.8 9.1 18.7 65.4 17 149 A G T 3 S+ 0 0 39 17,-2.7 -1,-0.2 1,-0.4 18,-0.1 0.129 87.8 131.5 100.3 -18.8 12.9 18.6 64.7 18 150 A N < - 0 0 50 -3,-2.1 16,-3.1 15,-0.1 -1,-0.4 -0.381 60.8-121.9 -64.0 139.1 12.6 16.9 61.3 19 151 A R E +A 33 0A 66 68,-0.3 68,-2.0 14,-0.2 2,-0.3 -0.561 44.9 177.6 -74.1 152.1 14.4 18.3 58.4 20 152 A C E -AB 32 86A 0 12,-2.3 12,-1.9 69,-0.3 2,-0.4 -0.957 34.7-135.0-154.8 164.1 12.0 19.2 55.6 21 153 A E E -AB 31 85A 29 64,-2.3 64,-2.3 -2,-0.3 2,-0.5 -0.997 22.5-153.0-127.9 125.2 11.3 20.6 52.2 22 154 A V E -AB 30 84A 0 8,-3.5 8,-2.3 -2,-0.4 2,-0.5 -0.864 13.0-179.5-101.2 127.2 8.3 23.0 51.7 23 155 A T - 0 0 52 60,-2.5 2,-0.6 -2,-0.5 6,-0.1 -0.903 4.7-177.2-126.1 103.1 6.6 23.3 48.3 24 156 A V > - 0 0 41 -2,-0.5 3,-1.9 4,-0.3 -2,-0.0 -0.896 54.2 -63.0-104.8 115.0 3.8 25.8 48.3 25 157 A G T 3 S- 0 0 73 -2,-0.6 0, 0.0 1,-0.3 0, 0.0 -0.214 115.6 -12.3 52.2-122.2 1.9 26.0 45.0 26 158 A A T 3 S+ 0 0 113 2,-0.0 -1,-0.3 -3,-0.0 -3,-0.0 0.566 106.8 116.6 -86.2 -10.8 4.1 27.3 42.1 27 159 A Q S < S- 0 0 98 -3,-1.9 2,-0.1 1,-0.1 3,-0.1 -0.008 74.5 -93.3 -62.5 159.3 7.0 28.4 44.4 28 160 A M - 0 0 137 1,-0.1 -4,-0.3 -5,-0.1 -1,-0.1 -0.478 51.9 -98.4 -64.9 140.7 10.6 27.1 44.5 29 161 A A - 0 0 39 -2,-0.1 2,-0.4 -6,-0.1 -6,-0.2 -0.378 41.4-161.2 -61.5 138.7 11.1 24.3 47.1 30 162 A R E -A 22 0A 19 -8,-2.3 -8,-3.5 -2,-0.1 2,-0.2 -0.993 3.1-146.4-129.6 134.2 12.6 25.6 50.4 31 163 A R E +A 21 0A 51 -2,-0.4 22,-2.2 -10,-0.2 23,-0.4 -0.626 35.3 117.6 -99.3 155.7 14.3 23.5 53.0 32 164 A G E -AC 20 52A 0 -12,-1.9 -12,-2.3 20,-0.3 2,-0.4 -0.898 56.6 -67.3-176.6-150.7 14.4 24.0 56.8 33 165 A E E -AC 19 51A 81 18,-2.1 18,-3.2 -2,-0.3 2,-0.3 -0.971 42.7-110.2-129.5 140.5 13.5 22.3 60.1 34 166 A V E + C 0 50A 0 -16,-3.1 -17,-2.7 -2,-0.4 16,-0.2 -0.555 37.9 168.8 -69.8 125.0 10.0 21.5 61.5 35 167 A A E + 0 0 19 14,-3.7 2,-0.3 1,-0.4 15,-0.2 0.550 63.4 17.2-113.2 -13.0 9.4 23.8 64.5 36 168 A Y E - C 0 49A 60 13,-1.5 13,-2.3 -21,-0.1 -1,-0.4 -0.971 53.2-176.5-160.3 138.7 5.7 23.2 65.1 37 169 A V E + C 0 48A 44 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.919 50.2 35.7-141.3 120.6 2.9 20.7 64.1 38 170 A G E S- C 0 47A 19 9,-2.3 9,-2.1 -2,-0.3 2,-0.1 -0.954 87.9 -11.3 144.9-160.2 -0.7 21.0 65.0 39 171 A A - 0 0 70 -2,-0.3 2,-0.2 7,-0.2 7,-0.1 -0.352 52.2-171.6 -75.3 153.2 -3.6 23.5 65.6 40 172 A T - 0 0 23 3,-0.6 5,-0.1 5,-0.4 -1,-0.0 -0.762 34.0-112.6-130.1 179.7 -3.1 27.3 65.8 41 173 A K S S+ 0 0 165 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 0.633 104.1 63.6 -88.1 -15.3 -5.3 30.3 66.6 42 174 A F S S- 0 0 75 1,-0.3 2,-0.3 2,-0.0 -1,-0.1 0.742 114.0 -1.0 -90.2 -24.8 -5.3 31.8 63.1 43 175 A K S S- 0 0 106 2,-0.1 -3,-0.6 -3,-0.0 -1,-0.3 -0.940 77.7 -98.6-162.9 146.3 -7.2 29.2 61.1 44 176 A E S S+ 0 0 145 -2,-0.3 2,-0.1 -3,-0.1 -3,-0.1 -0.016 78.2 36.3 -57.8 162.3 -8.7 25.7 61.7 45 177 A G S S- 0 0 33 -5,-0.1 -5,-0.4 2,-0.0 2,-0.3 -0.251 98.4 -33.4 90.5-172.3 -6.9 22.4 60.8 46 178 A V - 0 0 33 -7,-0.1 2,-0.3 -42,-0.1 -7,-0.2 -0.688 53.9-172.5 -92.6 137.2 -3.3 21.3 61.0 47 179 A W E -C 38 0A 32 -9,-2.1 -9,-2.3 -2,-0.3 2,-0.5 -0.954 14.9-146.5-125.0 146.8 -0.4 23.6 60.4 48 180 A V E -CD 37 79A 0 31,-3.0 31,-2.2 -2,-0.3 2,-0.5 -0.970 11.1-152.9-114.9 118.5 3.3 23.0 60.1 49 181 A G E -CD 36 78A 0 -13,-2.3 -14,-3.7 -2,-0.5 -13,-1.5 -0.815 17.0-165.5 -88.8 124.5 5.7 25.7 61.4 50 182 A V E -CD 34 77A 0 27,-3.2 27,-1.7 -2,-0.5 2,-0.8 -0.931 21.2-150.3-118.2 135.2 9.0 25.6 59.6 51 183 A K E -CD 33 76A 75 -18,-3.2 -18,-2.1 -2,-0.4 25,-0.2 -0.906 32.6-146.6 -97.8 102.5 12.3 27.3 60.5 52 184 A Y E -C 32 0A 9 23,-3.1 -20,-0.3 -2,-0.8 5,-0.1 -0.294 16.3-131.8 -74.2 155.3 13.8 27.9 57.0 53 185 A D S S+ 0 0 36 -22,-2.2 -21,-0.1 2,-0.0 -1,-0.1 0.850 95.2 36.3 -69.7 -38.4 17.5 27.8 56.2 54 186 A E S S- 0 0 95 -23,-0.4 2,-2.4 21,-0.1 3,-0.2 -0.721 102.0 -95.1-111.2 161.8 17.3 31.1 54.3 55 187 A P S S+ 0 0 76 0, 0.0 20,-0.2 0, 0.0 21,-0.1 -0.367 84.3 120.2 -74.3 65.1 15.2 34.3 55.1 56 188 A V + 0 0 51 -2,-2.4 19,-0.2 19,-0.1 18,-0.1 0.170 47.5 92.8-116.6 12.6 12.5 33.1 52.7 57 189 A G S S- 0 0 13 17,-3.0 20,-0.2 -3,-0.2 18,-0.1 -0.169 73.0-124.2 -98.1-166.7 9.6 32.8 55.1 58 190 A K S S+ 0 0 177 18,-2.3 2,-0.3 -2,-0.1 19,-0.2 0.440 79.4 29.6-121.5 -7.8 6.8 35.2 56.2 59 191 A N B -E 76 0A 22 17,-2.3 17,-2.5 13,-0.1 16,-0.5 -0.860 66.4-118.7-147.4 177.7 7.2 35.4 60.0 60 192 A D S S- 0 0 46 2,-0.5 11,-1.2 -2,-0.3 3,-0.1 0.029 83.4 -74.0-108.0 23.0 9.4 35.2 63.1 61 193 A G S S+ 0 0 0 1,-0.4 7,-2.8 9,-0.2 8,-1.7 0.304 114.3 92.0 97.3 -5.6 7.6 32.2 64.6 62 194 A S E -F 67 0B 27 5,-0.3 -2,-0.5 6,-0.2 2,-0.4 -0.897 52.2-169.2-119.9 148.6 4.7 34.4 65.6 63 195 A V E > S-F 66 0B 44 3,-2.1 3,-2.0 -2,-0.3 -22,-0.1 -0.995 76.0 -6.0-135.0 133.5 1.4 35.2 63.8 64 196 A A T 3 S- 0 0 98 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.819 131.2 -54.6 53.6 35.5 -1.1 37.8 64.9 65 197 A G T 3 S+ 0 0 80 1,-0.2 2,-0.5 0, 0.0 -1,-0.3 0.466 112.9 117.8 81.2 2.8 0.9 38.5 68.0 66 198 A V E < -F 63 0B 44 -3,-2.0 -3,-2.1 0, 0.0 2,-0.4 -0.907 58.2-140.1-106.8 122.2 0.8 34.8 69.1 67 199 A R E +F 62 0B 118 -2,-0.5 -5,-0.3 -5,-0.2 3,-0.1 -0.705 30.8 162.3 -85.6 131.0 4.2 33.0 69.4 68 200 A Y - 0 0 34 -7,-2.8 2,-0.3 1,-0.5 -6,-0.2 0.691 69.1 -7.9-112.3 -38.6 4.3 29.4 68.2 69 201 A F S S- 0 0 12 -8,-1.7 2,-0.5 -33,-0.1 -1,-0.5 -0.928 72.5-101.8-150.5 173.6 8.1 29.0 67.8 70 202 A D + 0 0 113 -2,-0.3 2,-0.3 -3,-0.1 -9,-0.2 -0.909 52.0 122.2-109.4 129.6 11.3 30.9 67.9 71 203 A C - 0 0 25 -11,-1.2 3,-0.1 -2,-0.5 5,-0.1 -0.960 58.9 -78.4-164.9 172.9 13.3 32.2 64.9 72 204 A D > - 0 0 112 -2,-0.3 3,-2.1 1,-0.2 4,-0.3 -0.414 66.3 -75.3 -74.2 153.4 14.7 35.3 63.3 73 205 A P T 3 S+ 0 0 93 0, 0.0 -13,-0.2 0, 0.0 -1,-0.2 -0.230 119.0 12.4 -46.9 133.9 12.4 37.6 61.3 74 206 A K T 3 S+ 0 0 77 -3,-0.1 -17,-3.0 2,-0.1 -14,-0.2 0.465 104.0 94.7 72.0 6.5 11.5 36.2 57.8 75 207 A Y S < S+ 0 0 75 -3,-2.1 -23,-3.1 -16,-0.5 2,-0.3 0.457 71.6 77.7-100.6 -3.1 12.9 32.7 58.7 76 208 A G E +DE 51 59A 0 -17,-2.5 -17,-2.3 -4,-0.3 -18,-2.3 -0.804 50.9 170.2-111.0 149.9 9.6 31.3 59.8 77 209 A G E -D 50 0A 4 -27,-1.7 -27,-3.2 -2,-0.3 2,-0.5 -0.990 22.3-146.8-152.2 149.2 6.6 30.0 57.9 78 210 A F E +D 49 0A 29 -2,-0.3 2,-0.3 -29,-0.2 -29,-0.2 -0.982 30.8 159.6-114.7 127.4 3.3 28.1 58.5 79 211 A V E -D 48 0A 14 -31,-2.2 -31,-3.0 -2,-0.5 -2,-0.0 -0.906 43.4 -88.5-139.5 164.6 2.0 25.8 55.8 80 212 A R > - 0 0 43 -2,-0.3 3,-2.1 -33,-0.2 -33,-0.2 -0.444 39.5-114.5 -73.0 146.6 -0.4 22.8 55.4 81 213 A P G > S+ 0 0 0 0, 0.0 3,-1.9 0, 0.0 -1,-0.1 0.803 113.8 65.6 -50.6 -33.4 1.0 19.3 56.0 82 214 A V G 3 S+ 0 0 72 1,-0.3 -75,-0.0 -79,-0.1 -74,-0.0 0.708 99.2 53.7 -63.6 -19.1 0.4 18.4 52.3 83 215 A D G < S+ 0 0 45 -3,-2.1 -60,-2.5 -61,-0.1 2,-0.4 0.323 99.0 80.1 -95.5 6.5 3.0 21.0 51.3 84 216 A V E < -B 22 0A 12 -3,-1.9 2,-0.5 -62,-0.2 -62,-0.2 -0.964 52.9-171.8-123.1 127.4 5.7 19.5 53.6 85 217 A K E -B 21 0A 117 -64,-2.3 -64,-2.3 -2,-0.4 2,-0.3 -0.974 14.6-157.5-111.4 129.0 8.0 16.5 53.0 86 218 A V E +B 20 0A 44 -2,-0.5 2,-0.3 -66,-0.2 -66,-0.2 -0.825 41.8 77.5-106.8 150.1 10.1 15.4 55.9 87 219 A G S S- 0 0 40 -68,-2.0 2,-1.5 -2,-0.3 -68,-0.3 -0.989 89.8 -12.7 153.5-157.0 13.3 13.3 55.7 88 220 A D + 0 0 148 -2,-0.3 -68,-0.1 -70,-0.1 -2,-0.0 -0.639 69.3 149.9 -81.4 90.2 17.0 13.8 55.0 89 221 A F - 0 0 32 -2,-1.5 -69,-0.3 -57,-0.1 -57,-0.1 -0.797 26.3-167.7-122.7 85.7 16.9 17.3 53.4 90 222 A P - 0 0 74 0, 0.0 2,-0.1 0, 0.0 -59,-0.0 -0.273 37.7 -76.5 -74.5 161.7 20.2 18.9 54.2 91 223 A E - 0 0 114 1,-0.1 2,-1.3 -38,-0.0 -59,-0.0 -0.353 42.5-124.2 -62.3 130.5 20.9 22.6 53.7 92 224 A L + 0 0 120 -3,-0.1 2,-0.3 -2,-0.1 -1,-0.1 -0.639 64.2 121.5 -77.8 94.9 21.4 23.6 50.1 93 225 A S - 0 0 77 -2,-1.3 2,-0.5 0, 0.0 -2,-0.0 -0.984 47.7-152.5-156.8 144.2 24.8 25.3 50.3 94 226 A I - 0 0 120 -2,-0.3 3,-0.2 1,-0.2 -2,-0.0 -0.984 8.0-177.6-122.8 118.4 28.3 24.9 48.7 95 227 A D S S- 0 0 164 -2,-0.5 2,-0.3 1,-0.4 -1,-0.2 0.948 77.0 -20.8 -75.3 -53.3 31.3 26.1 50.8 96 228 A E 0 0 186 0, 0.0 -1,-0.4 0, 0.0 0, 0.0 -0.955 360.0 360.0-157.2 139.5 33.8 25.2 48.1 97 229 A I 0 0 201 -2,-0.3 -3,-0.0 -3,-0.2 0, 0.0 -0.905 360.0 360.0-136.7 360.0 33.7 22.8 45.2