==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 21-JUN-04 1TS9 . COMPND 2 MOLECULE: RIBONUCLEASE P PROTEIN COMPONENT 1; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR D.J.SIDOTE,J.HEIDEKER,D.W.HOFFMAN . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6376.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 31.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 18.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 5 A L > 0 0 156 0, 0.0 4,-1.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 -69.9 11.9 -3.3 -1.3 2 6 A Q H > + 0 0 42 1,-0.2 4,-1.3 2,-0.2 66,-0.1 0.831 360.0 62.8 -70.7 -32.8 10.4 -2.5 2.1 3 7 A G H 4 S+ 0 0 23 1,-0.2 4,-0.4 2,-0.2 3,-0.4 0.894 102.4 51.3 -58.8 -38.3 11.2 1.1 1.7 4 8 A V H >> S+ 0 0 23 1,-0.2 3,-1.7 2,-0.2 4,-0.7 0.876 100.4 61.8 -66.3 -38.2 8.9 1.2 -1.3 5 9 A E H >X S+ 0 0 41 -4,-1.1 4,-2.0 1,-0.3 3,-0.8 0.844 96.5 61.3 -56.8 -33.8 6.1 -0.5 0.8 6 10 A L H 3< S+ 0 0 0 -4,-1.3 -1,-0.3 -3,-0.4 -2,-0.2 0.718 92.0 65.9 -66.7 -21.2 6.2 2.6 3.0 7 11 A I H <4 S+ 0 0 9 -3,-1.7 -1,-0.2 -4,-0.4 -2,-0.2 0.859 112.8 31.7 -68.7 -33.2 5.2 4.8 0.1 8 12 A A H << S+ 0 0 39 -3,-0.8 -2,-0.2 -4,-0.7 2,-0.2 0.770 104.8 83.4 -93.9 -30.8 1.8 3.1 -0.1 9 13 A R S < S- 0 0 95 -4,-2.0 2,-0.1 73,-0.1 0, 0.0 -0.512 82.8-116.6 -78.0 140.1 1.2 2.3 3.6 10 14 A D - 0 0 80 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.1 -0.427 21.6-135.0 -68.4 154.8 -0.2 4.9 5.9 11 15 A W > + 0 0 0 2,-0.1 3,-2.2 -2,-0.1 22,-0.4 0.380 59.5 129.9 -95.9 5.7 2.3 5.6 8.6 12 16 A I T 3 S+ 0 0 68 1,-0.3 22,-0.2 22,-0.1 3,-0.1 -0.397 75.6 22.5 -62.8 128.3 -0.1 5.5 11.5 13 17 A G T 3 S+ 0 0 40 20,-2.8 -1,-0.3 1,-0.3 2,-0.2 0.305 99.8 116.9 97.7 -8.2 1.3 3.3 14.2 14 18 A L < - 0 0 15 -3,-2.2 19,-2.8 19,-0.1 2,-0.5 -0.626 66.7-119.1 -96.4 154.4 4.9 3.6 13.1 15 19 A X E +AB 32 62A 74 47,-0.5 47,-2.1 -2,-0.2 2,-0.3 -0.774 41.5 173.2 -89.1 128.0 7.9 5.1 14.9 16 20 A V E -AB 31 61A 0 15,-2.8 15,-2.3 -2,-0.5 2,-0.4 -0.929 21.4-159.4-136.4 160.6 9.4 8.1 13.0 17 21 A E E -AB 30 60A 33 43,-2.0 43,-2.6 -2,-0.3 2,-0.6 -0.989 21.9-128.5-142.3 129.7 12.0 10.8 13.5 18 22 A V E + B 0 59A 0 11,-2.9 10,-2.3 -2,-0.4 41,-0.2 -0.680 35.2 162.4 -79.6 118.4 12.4 14.1 11.8 19 23 A V E + 0 0 30 39,-2.4 2,-0.3 -2,-0.6 40,-0.2 0.629 65.4 27.9-109.5 -20.5 15.9 14.4 10.4 20 24 A E E + B 0 58A 83 38,-1.5 38,-2.2 6,-0.1 -1,-0.3 -0.998 67.2 149.9-142.4 141.1 15.5 17.2 7.9 21 25 A S - 0 0 24 -2,-0.3 36,-0.2 36,-0.2 6,-0.1 -0.923 48.6-133.2-170.7 143.5 13.0 20.1 7.7 22 26 A P S S+ 0 0 79 0, 0.0 2,-1.2 0, 0.0 3,-0.1 0.726 106.3 69.3 -70.6 -21.9 12.7 23.7 6.5 23 27 A N S > S- 0 0 70 1,-0.2 3,-2.6 -3,-0.1 4,-0.2 -0.787 82.1-162.4 -96.6 85.9 11.2 24.4 10.0 24 28 A H G > S+ 0 0 153 -2,-1.2 3,-1.7 1,-0.3 -1,-0.2 0.728 79.1 65.4 -42.3 -39.4 14.6 23.9 11.7 25 29 A S G 3 S+ 0 0 99 1,-0.3 -1,-0.3 -3,-0.1 4,-0.0 0.600 87.5 73.9 -65.7 -9.8 13.2 23.4 15.2 26 30 A E G X + 0 0 15 -3,-2.6 3,-2.0 2,-0.1 -8,-0.3 0.635 66.6 111.7 -79.0 -14.3 11.5 20.2 14.1 27 31 A V T < S+ 0 0 96 -3,-1.7 -8,-0.2 1,-0.3 3,-0.1 -0.357 79.3 26.6 -59.8 136.8 14.8 18.3 14.0 28 32 A G T 3 S+ 0 0 46 -10,-2.3 2,-0.3 1,-0.3 -1,-0.3 0.189 78.1 140.5 97.0 -20.0 14.7 15.6 16.7 29 33 A I < + 0 0 23 -3,-2.0 -11,-2.9 -11,-0.2 2,-0.4 -0.458 28.1 167.9 -60.9 120.0 10.9 15.2 16.9 30 34 A K E +A 17 0A 94 -2,-0.3 16,-0.5 -13,-0.2 2,-0.3 -0.999 12.6 90.4-140.7 139.7 10.6 11.5 17.3 31 35 A G E -AC 16 45A 6 -15,-2.3 -15,-2.8 -2,-0.4 2,-0.4 -0.990 69.2 -40.9 167.0-166.5 7.7 9.3 18.3 32 36 A E E -AC 15 44A 75 12,-1.9 12,-2.8 -2,-0.3 2,-0.4 -0.757 51.0-120.6 -95.6 132.2 4.7 7.2 17.1 33 37 A V E + C 0 43A 0 -19,-2.8 -20,-2.8 -2,-0.4 10,-0.3 -0.558 32.7 175.1 -68.6 121.2 2.5 8.5 14.3 34 38 A V E + 0 0 65 8,-2.9 2,-0.3 -2,-0.4 9,-0.2 0.520 65.4 4.4-106.2 -9.8 -1.0 8.7 15.8 35 39 A D E - C 0 42A 69 7,-1.2 7,-2.8 -24,-0.1 2,-0.3 -0.963 61.5-161.8-167.0 157.7 -2.7 10.2 12.8 36 40 A E E - C 0 41A 25 -2,-0.3 2,-0.2 5,-0.2 5,-0.2 -0.996 5.8-179.0-150.5 142.9 -2.0 11.2 9.2 37 41 A T - 0 0 61 3,-2.6 40,-0.2 -2,-0.3 -2,-0.0 -0.722 51.6 -88.9-128.1 178.0 -3.5 13.4 6.6 38 42 A Q S S+ 0 0 70 -2,-0.2 3,-0.0 1,-0.2 16,-0.0 0.879 127.4 24.9 -58.6 -35.7 -2.4 14.1 3.0 39 43 A N S S+ 0 0 55 37,-0.1 15,-2.2 15,-0.1 16,-0.4 0.534 120.0 44.2-109.6 -6.8 -0.2 16.9 4.2 40 44 A T E - D 0 53A 34 13,-0.2 -3,-2.6 14,-0.1 2,-0.4 -0.942 52.0-146.6-143.2 163.6 0.7 16.1 7.8 41 45 A L E -CD 36 52A 0 11,-2.7 11,-3.0 -2,-0.3 2,-0.6 -0.992 15.2-150.6-125.4 130.4 1.8 13.6 10.4 42 46 A K E -CD 35 51A 93 -7,-2.8 -8,-2.9 -2,-0.4 -7,-1.2 -0.916 21.8-164.8-103.4 124.9 0.6 13.8 14.0 43 47 A I E -CD 33 50A 1 7,-3.6 7,-2.9 -2,-0.6 2,-0.8 -0.919 21.3-146.0-119.9 136.5 3.3 12.4 16.4 44 48 A X E -CD 32 49A 91 -12,-2.8 -12,-1.9 -2,-0.4 5,-0.2 -0.871 30.4-168.7 -96.6 109.3 3.2 11.2 20.0 45 49 A T E -C 31 0A 31 3,-1.5 -14,-0.2 -2,-0.8 3,-0.1 -0.372 38.0 -95.7 -92.6 175.3 6.6 12.1 21.4 46 50 A E S S+ 0 0 189 -16,-0.5 -15,-0.1 1,-0.2 -1,-0.1 0.847 123.9 22.6 -58.6 -35.9 8.1 11.1 24.8 47 51 A K S S- 0 0 202 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 0.421 130.7 -30.5-115.5 2.2 7.0 14.3 26.4 48 52 A G S S- 0 0 34 -3,-0.1 -3,-1.5 2,-0.0 2,-0.3 -0.801 71.7 -60.8-175.2-144.0 4.1 15.5 24.3 49 53 A L E -D 44 0A 135 -5,-0.2 2,-0.3 -2,-0.2 -5,-0.2 -0.998 37.3-172.6-137.9 139.7 2.4 15.7 20.9 50 54 A K E -D 43 0A 112 -7,-2.9 -7,-3.6 -2,-0.3 2,-0.5 -0.979 16.1-150.6-136.7 146.6 3.6 17.3 17.7 51 55 A V E -D 42 0A 96 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.975 21.6-173.8-114.1 127.1 2.1 18.0 14.3 52 56 A V E -D 41 0A 0 -11,-3.0 -11,-2.7 -2,-0.5 -2,-0.0 -0.983 19.9-132.5-128.6 126.6 4.6 18.0 11.4 53 57 A A E -D 40 0A 33 -2,-0.4 -13,-0.2 -13,-0.2 19,-0.1 -0.335 12.7-141.8 -68.3 156.3 4.0 18.9 7.8 54 58 A K > + 0 0 0 -15,-2.2 3,-1.8 18,-0.1 18,-0.4 0.847 68.1 99.4 -89.1 -38.9 5.3 16.4 5.2 55 59 A R T 3 S+ 0 0 146 -16,-0.4 3,-0.1 1,-0.3 -2,-0.1 -0.266 99.1 0.7 -57.6 125.9 6.6 18.8 2.5 56 60 A G T 3 S+ 0 0 38 1,-0.3 -1,-0.3 -35,-0.1 2,-0.2 0.343 105.4 119.9 80.4 -8.3 10.3 19.4 2.6 57 61 A R < - 0 0 31 -3,-1.8 15,-3.3 -36,-0.2 16,-0.5 -0.568 50.4-153.0 -90.8 153.8 10.8 17.0 5.5 58 62 A T E -BE 20 71A 6 -38,-2.2 -39,-2.4 13,-0.3 -38,-1.5 -0.996 15.5-163.9-124.3 130.7 12.9 13.9 5.7 59 63 A F E -BE 18 70A 0 11,-2.9 11,-3.2 -2,-0.4 2,-0.5 -0.921 17.1-144.2-119.8 142.0 11.9 11.1 8.1 60 64 A R E -BE 17 69A 83 -43,-2.6 -43,-2.0 -2,-0.4 2,-0.4 -0.879 28.9-164.9 -97.5 133.9 13.7 8.1 9.4 61 65 A V E -BE 16 68A 0 7,-3.3 7,-2.6 -2,-0.5 2,-0.6 -0.985 18.9-140.2-129.0 133.2 11.2 5.3 9.8 62 66 A W E +BE 15 67A 78 -47,-2.1 -47,-0.5 -2,-0.4 2,-0.3 -0.800 37.4 159.2 -89.9 120.4 11.5 2.1 11.7 63 67 A Y E > - E 0 66A 35 3,-2.6 3,-2.1 -2,-0.6 -61,-0.1 -0.947 58.5 -24.1-150.5 125.5 9.9 -0.7 9.7 64 68 A K T 3 S- 0 0 144 -2,-0.3 3,-0.1 1,-0.3 -62,-0.1 0.860 125.2 -43.7 41.2 56.4 10.2 -4.5 9.7 65 69 A G T 3 S+ 0 0 90 1,-0.2 -1,-0.3 0, 0.0 2,-0.3 0.465 123.2 95.0 75.9 0.9 13.7 -4.7 11.3 66 70 A K E < -E 63 0A 80 -3,-2.1 -3,-2.6 -64,-0.0 2,-0.5 -0.781 63.6-140.5-122.2 165.8 15.0 -1.8 9.1 67 71 A I E -E 62 0A 105 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.967 26.5-176.9-128.3 113.6 15.5 1.9 9.4 68 72 A X E -E 61 0A 30 -7,-2.6 -7,-3.3 -2,-0.5 2,-0.6 -0.810 24.2-138.3-115.5 155.1 14.7 4.0 6.3 69 73 A R E +E 60 0A 133 -2,-0.3 2,-0.4 -9,-0.3 -9,-0.2 -0.945 29.4 177.8-108.3 120.0 15.0 7.7 5.4 70 74 A I E -E 59 0A 12 -11,-3.2 -11,-2.9 -2,-0.6 2,-0.3 -0.988 26.6-127.4-130.1 133.3 12.0 8.8 3.4 71 75 A K E > -E 58 0A 112 -2,-0.4 3,-2.0 -13,-0.2 4,-0.4 -0.590 13.0-138.0 -77.8 133.9 11.2 12.3 2.1 72 76 A G G >> S+ 0 0 0 -15,-3.3 3,-1.3 -18,-0.4 4,-0.9 0.781 100.4 73.9 -60.1 -26.8 7.7 13.7 3.0 73 77 A D G 34 S+ 0 0 86 -16,-0.5 -1,-0.3 1,-0.3 -18,-0.1 0.689 93.6 54.5 -59.6 -19.5 7.5 15.0 -0.6 74 78 A L G <4 S+ 0 0 59 -3,-2.0 -1,-0.3 1,-0.1 -2,-0.2 0.683 116.0 34.5 -88.3 -19.7 7.0 11.4 -1.6 75 79 A I T <4 S+ 0 0 0 -3,-1.3 2,-1.8 -4,-0.4 -2,-0.2 0.273 76.8 108.8-121.0 11.7 4.0 10.7 0.7 76 80 A N < + 0 0 17 -4,-0.9 2,-0.3 -37,-0.1 -38,-0.1 -0.431 64.6 94.6 -89.2 65.7 2.0 13.9 0.9 77 81 A F S S- 0 0 43 -2,-1.8 5,-0.0 -40,-0.2 -3,-0.0 -0.935 85.2 -81.2-144.6 163.7 -0.8 12.5 -1.1 78 82 A R > - 0 0 138 -2,-0.3 4,-2.5 1,-0.1 5,-0.2 -0.290 47.1-108.6 -65.5 155.2 -4.1 10.8 -0.5 79 83 A P H > S+ 0 0 88 0, 0.0 4,-1.3 0, 0.0 -1,-0.1 0.873 118.8 51.8 -52.8 -45.8 -4.0 7.0 0.2 80 84 A E H > S+ 0 0 149 1,-0.2 4,-1.0 2,-0.2 3,-0.3 0.908 112.6 48.2 -57.9 -42.6 -5.5 5.9 -3.1 81 85 A D H >> S+ 0 0 58 1,-0.2 4,-1.9 -3,-0.2 3,-0.5 0.917 106.0 55.8 -63.7 -47.7 -2.9 8.1 -4.8 82 86 A R H 3X S+ 0 0 6 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.739 99.0 63.4 -61.1 -23.7 0.0 6.7 -2.8 83 87 A I H 3X S+ 0 0 108 -4,-1.3 4,-1.8 -3,-0.3 -1,-0.2 0.935 106.1 42.2 -68.2 -43.7 -0.9 3.2 -3.9 84 88 A K H X>S+ 0 0 59 -4,-2.3 5,-1.8 1,-0.2 4,-1.3 0.919 114.3 49.2 -60.7 -43.3 9.1 -0.6 -10.9 92 96 A R H 3<5S+ 0 0 178 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.868 112.4 47.2 -63.9 -37.5 11.8 2.0 -10.7 93 97 A A T 3<5S+ 0 0 67 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.433 116.1 46.7 -84.0 0.4 13.6 0.1 -7.8 94 98 A K T <45S- 0 0 132 -3,-1.0 -2,-0.2 -4,-0.4 -1,-0.2 0.507 102.9-125.7-115.6 -12.5 13.2 -3.1 -9.8 95 99 A G T <5 + 0 0 76 -4,-1.3 2,-0.4 1,-0.3 -3,-0.2 0.757 65.7 139.2 70.3 22.3 14.4 -1.9 -13.2 96 100 A V < - 0 0 59 -5,-1.8 -1,-0.3 -6,-0.2 -2,-0.2 -0.824 53.8-144.7-101.8 139.1 11.2 -3.3 -14.6 97 101 A W 0 0 224 -2,-0.4 -1,-0.1 -3,-0.1 -6,-0.1 0.669 360.0 360.0 -77.0 -15.8 9.2 -1.3 -17.2 98 102 A I 0 0 132 -7,-0.1 -7,-0.1 0, 0.0 -1,-0.1 0.453 360.0 360.0-160.7 360.0 5.8 -2.3 -15.9