==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 21-JUN-04 1TSF . COMPND 2 MOLECULE: RIBONUCLEASE P PROTEIN COMPONENT 1; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR D.J.SIDOTE,J.HEIDEKER,D.W.HOFFMAN . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5051.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 74.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 38.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 17.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 6 A Q > 0 0 119 0, 0.0 4,-2.0 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -12.8 2.1 24.3 21.1 2 7 A G H > + 0 0 30 2,-0.2 4,-1.0 1,-0.2 65,-0.0 0.912 360.0 42.8 -64.3 -42.3 3.4 22.3 18.2 3 8 A V H >> S+ 0 0 130 1,-0.2 4,-1.1 2,-0.2 3,-0.5 0.915 112.7 52.3 -69.7 -43.2 0.9 19.5 18.9 4 9 A E H 34 S+ 0 0 40 1,-0.2 4,-0.4 2,-0.2 3,-0.2 0.849 102.5 61.8 -62.1 -33.1 -2.0 21.9 19.7 5 10 A L H >< S+ 0 0 0 -4,-2.0 3,-1.0 1,-0.2 -1,-0.2 0.869 99.8 53.1 -61.4 -38.0 -1.3 23.5 16.3 6 11 A I H << S+ 0 0 37 -4,-1.0 -1,-0.2 -3,-0.5 -2,-0.2 0.845 105.0 56.8 -67.5 -31.1 -2.1 20.3 14.4 7 12 A A T 3< S+ 0 0 34 -4,-1.1 2,-0.3 -3,-0.2 -1,-0.2 0.506 99.1 72.3 -79.7 -5.9 -5.4 20.0 16.2 8 13 A R S < S- 0 0 80 -3,-1.0 2,-0.3 -4,-0.4 71,-0.0 -0.773 89.1-100.1-115.5 160.5 -6.8 23.4 15.2 9 14 A D - 0 0 65 -2,-0.3 -2,-0.1 1,-0.1 68,-0.0 -0.588 30.8-142.6 -70.2 127.7 -8.2 25.0 12.0 10 15 A W > + 0 0 1 -2,-0.3 3,-2.2 -4,-0.1 22,-0.3 0.481 58.4 128.4 -75.3 -0.8 -5.3 27.1 10.7 11 16 A I T 3 S+ 0 0 65 1,-0.3 22,-0.2 22,-0.1 3,-0.1 -0.336 72.1 24.5 -58.1 130.2 -7.6 29.8 9.5 12 17 A G T 3 S+ 0 0 42 20,-2.9 -1,-0.3 1,-0.3 2,-0.2 0.168 97.5 112.4 101.7 -17.6 -6.4 33.1 10.9 13 18 A L < - 0 0 19 -3,-2.2 19,-2.7 19,-0.1 2,-0.4 -0.556 66.8-120.7 -91.3 155.0 -2.8 32.2 11.3 14 19 A M E +AB 31 61A 77 47,-0.6 47,-2.2 17,-0.2 2,-0.3 -0.789 39.0 172.0 -92.1 133.1 0.2 33.5 9.4 15 20 A V E -AB 30 60A 0 15,-2.7 15,-2.4 -2,-0.4 2,-0.4 -0.934 19.7-158.2-138.0 160.2 2.2 30.9 7.5 16 21 A E E -AB 29 59A 45 43,-2.1 43,-2.9 -2,-0.3 2,-0.6 -0.985 23.6-124.6-142.7 129.8 5.0 30.8 4.9 17 22 A V E + B 0 58A 1 11,-3.0 10,-3.4 -2,-0.4 41,-0.2 -0.633 34.9 167.7 -74.0 116.3 5.9 28.0 2.5 18 23 A V E + 0 0 28 39,-2.2 2,-0.3 -2,-0.6 40,-0.2 0.553 64.8 26.4-106.6 -10.6 9.5 27.2 3.2 19 24 A E E + B 0 57A 89 38,-1.3 38,-2.3 6,-0.1 -1,-0.3 -0.956 66.2 146.9-154.9 131.6 9.8 23.9 1.3 20 25 A S - 0 0 15 -2,-0.3 36,-0.1 36,-0.2 6,-0.1 -0.975 51.5-123.9-162.9 150.0 8.0 22.6 -1.7 21 26 A P S S+ 0 0 97 0, 0.0 2,-0.8 0, 0.0 3,-0.1 0.740 107.4 66.1 -67.6 -20.8 8.5 20.4 -4.8 22 27 A N S >> S- 0 0 72 1,-0.2 3,-2.2 -3,-0.0 4,-0.5 -0.878 73.6-162.3-103.6 101.5 7.3 23.4 -6.8 23 28 A H G >4 S+ 0 0 163 -2,-0.8 3,-1.1 1,-0.3 -1,-0.2 0.799 85.3 72.5 -54.0 -30.4 9.9 26.1 -6.3 24 29 A S G 34 S+ 0 0 101 1,-0.3 -1,-0.3 -3,-0.1 -2,-0.0 0.805 97.1 50.0 -54.9 -31.0 7.3 28.7 -7.5 25 30 A E G X4 S+ 0 0 25 -3,-2.2 3,-2.1 2,-0.1 -8,-0.3 0.656 81.2 108.0 -84.9 -18.8 5.5 28.2 -4.1 26 31 A V T << S+ 0 0 69 -3,-1.1 -8,-0.2 -4,-0.5 3,-0.1 -0.426 84.3 25.0 -63.9 129.5 8.5 28.7 -1.8 27 32 A G T 3 S+ 0 0 39 -10,-3.4 -1,-0.3 1,-0.4 2,-0.2 0.209 78.8 145.5 101.8 -16.3 8.2 32.0 -0.1 28 33 A I < + 0 0 31 -3,-2.1 -11,-3.0 -11,-0.1 -1,-0.4 -0.418 28.3 175.0 -57.2 122.4 4.4 32.2 -0.4 29 34 A K E +A 16 0A 102 -13,-0.2 16,-0.5 -2,-0.2 2,-0.3 -0.996 14.3 84.9-139.5 140.4 3.6 34.0 2.9 30 35 A G E -A 15 0A 5 -15,-2.4 -15,-2.7 -2,-0.4 2,-0.4 -0.992 69.8 -35.9 164.2-166.3 0.4 35.3 4.4 31 36 A E E -AC 14 43A 82 12,-2.0 12,-3.5 -2,-0.3 2,-0.6 -0.725 50.7-124.3 -92.1 131.2 -2.8 34.7 6.4 32 37 A V E + C 0 42A 0 -19,-2.7 -20,-2.9 -2,-0.4 10,-0.2 -0.631 32.6 172.8 -73.8 117.8 -4.7 31.5 6.0 33 38 A V E + 0 0 51 8,-2.9 2,-0.3 -2,-0.6 -1,-0.2 0.571 66.3 12.3-102.3 -12.9 -8.2 32.4 5.0 34 39 A D E - C 0 41A 63 7,-1.3 7,-3.0 -24,-0.1 2,-0.4 -0.976 58.3-158.0-161.5 149.4 -9.4 28.9 4.3 35 40 A E E - C 0 40A 15 -2,-0.3 5,-0.2 5,-0.2 2,-0.2 -0.998 12.9-178.7-133.5 127.7 -8.3 25.3 4.9 36 41 A T - 0 0 58 3,-2.5 40,-0.2 -2,-0.4 -2,-0.0 -0.617 49.1 -88.8-113.9 178.4 -9.5 22.3 2.9 37 42 A Q S S+ 0 0 71 -2,-0.2 -1,-0.0 1,-0.2 3,-0.0 0.912 125.5 15.9 -55.5 -42.9 -8.7 18.7 3.2 38 43 A N S S+ 0 0 78 15,-0.1 15,-2.4 37,-0.1 16,-0.4 0.506 122.4 49.2-112.6 -4.7 -5.7 19.1 0.9 39 44 A T E - D 0 52A 35 13,-0.2 -3,-2.5 14,-0.1 2,-0.4 -0.852 55.3-141.8-135.4 170.8 -5.0 22.8 0.6 40 45 A L E -CD 35 51A 0 11,-1.9 11,-2.3 -2,-0.3 2,-0.7 -0.999 16.8-147.3-129.3 126.0 -4.5 26.1 2.3 41 46 A K E -CD 34 50A 78 -7,-3.0 -8,-2.9 -2,-0.4 -7,-1.3 -0.896 24.7-166.1 -97.2 113.9 -5.9 29.3 0.8 42 47 A I E -CD 32 49A 0 7,-3.7 7,-2.9 -2,-0.7 2,-0.8 -0.903 18.7-145.2-110.9 127.9 -3.4 32.0 1.8 43 48 A M E +CD 31 48A 107 -12,-3.5 -12,-2.0 -2,-0.5 5,-0.2 -0.787 31.7 178.6 -88.5 109.7 -3.9 35.8 1.6 44 49 A T E > - D 0 47A 21 3,-1.9 3,-0.7 -2,-0.8 -14,-0.2 -0.543 46.7-102.3-107.0 175.4 -0.5 37.3 0.6 45 50 A E T 3 S+ 0 0 204 -16,-0.5 3,-0.1 1,-0.2 -15,-0.1 0.786 127.2 46.9 -66.5 -24.1 0.6 40.8 -0.1 46 51 A K T 3 S- 0 0 188 1,-0.3 -1,-0.2 3,-0.0 2,-0.2 0.540 126.5 -87.3 -92.7 -9.9 0.4 39.9 -3.7 47 52 A G E < -D 44 0A 29 -3,-0.7 -3,-1.9 2,-0.0 -1,-0.3 -0.748 66.0 -24.1 131.7-179.8 -3.0 38.2 -3.5 48 53 A L E -D 43 0A 105 -2,-0.2 2,-0.4 -5,-0.2 -5,-0.2 -0.460 55.1-175.3 -69.6 133.0 -4.7 34.9 -2.8 49 54 A K E -D 42 0A 74 -7,-2.9 -7,-3.7 -2,-0.2 2,-0.5 -0.990 16.6-151.1-132.4 136.8 -2.7 31.8 -3.2 50 55 A V E -D 41 0A 86 -2,-0.4 2,-0.4 -9,-0.2 -9,-0.2 -0.935 20.1-178.0-106.8 125.8 -3.8 28.1 -2.9 51 56 A V E -D 40 0A 0 -11,-2.3 -11,-1.9 -2,-0.5 5,-0.0 -0.989 25.6-121.4-127.9 133.5 -1.0 25.8 -1.9 52 57 A A E -D 39 0A 34 -2,-0.4 -13,-0.2 -13,-0.2 19,-0.1 -0.342 13.5-147.3 -67.6 153.0 -1.2 22.0 -1.5 53 58 A K S > S+ 0 0 0 -15,-2.4 3,-2.1 18,-0.1 18,-0.3 0.916 70.6 88.3 -86.5 -52.4 -0.4 20.6 2.0 54 59 A R T 3 S+ 0 0 174 -16,-0.4 3,-0.1 1,-0.3 -2,-0.1 -0.252 102.8 7.8 -53.7 124.0 1.1 17.2 1.1 55 60 A G T 3 S+ 0 0 47 1,-0.3 2,-0.3 -35,-0.1 -1,-0.3 0.459 107.1 107.5 85.0 0.2 4.9 17.5 0.4 56 61 A R < - 0 0 40 -3,-2.1 15,-3.6 -36,-0.1 2,-0.4 -0.745 56.9-146.8-108.4 157.7 5.2 21.1 1.6 57 62 A T E -BE 19 70A 5 -38,-2.3 -39,-2.2 -2,-0.3 -38,-1.3 -0.987 15.8-157.8-124.3 136.3 6.7 22.4 4.8 58 63 A F E -BE 17 69A 0 11,-3.0 11,-3.6 -2,-0.4 2,-0.5 -0.929 15.8-144.4-121.1 141.1 5.3 25.5 6.5 59 64 A R E -BE 16 68A 82 -43,-2.9 -43,-2.1 -2,-0.4 2,-0.4 -0.867 31.6-166.2 -94.5 129.0 6.7 28.1 8.8 60 65 A V E -BE 15 67A 0 7,-3.1 7,-2.6 -2,-0.5 2,-0.8 -0.979 21.8-144.8-127.4 135.6 3.9 29.0 11.2 61 66 A W E +BE 14 66A 77 -47,-2.2 -47,-0.6 -2,-0.4 2,-0.4 -0.866 40.3 156.1 -96.1 109.2 3.5 31.9 13.6 62 67 A Y E > - E 0 65A 21 3,-2.9 3,-2.1 -2,-0.8 -57,-0.1 -0.981 57.1 -16.4-144.9 129.8 1.6 30.5 16.6 63 68 A K T 3 S- 0 0 129 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.882 125.1 -50.9 47.9 49.5 1.2 31.3 20.2 64 69 A G T 3 S+ 0 0 82 1,-0.2 2,-0.3 -3,-0.0 -1,-0.3 0.528 122.0 103.2 70.8 5.2 4.4 33.5 20.3 65 70 A K E < -E 62 0A 137 -3,-2.1 -3,-2.9 -64,-0.0 2,-0.5 -0.837 63.0-142.6-118.9 155.9 6.3 30.7 18.7 66 71 A I E +E 61 0A 98 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.976 30.0 179.9-120.8 116.1 7.6 30.1 15.1 67 72 A M E -E 60 0A 30 -7,-2.6 -7,-3.1 -2,-0.5 2,-0.6 -0.841 30.4-133.6-122.3 155.9 7.4 26.5 14.0 68 73 A R E -E 59 0A 133 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.929 31.1-174.1-104.8 120.9 8.2 24.4 10.9 69 74 A I E -E 58 0A 12 -11,-3.6 -11,-3.0 -2,-0.6 2,-0.3 -0.967 22.4-130.9-123.6 129.1 5.3 22.0 10.2 70 75 A K E > -E 57 0A 94 -2,-0.4 3,-2.0 -13,-0.2 4,-0.5 -0.600 17.6-134.0 -76.3 130.9 5.2 19.3 7.5 71 76 A G G > S+ 0 0 0 -15,-3.6 3,-1.3 -2,-0.3 4,-0.5 0.772 101.5 71.1 -53.7 -30.1 2.1 19.5 5.4 72 77 A D G > S+ 0 0 98 -16,-0.4 3,-0.7 1,-0.3 -1,-0.3 0.826 90.7 60.9 -56.7 -32.6 1.6 15.8 5.8 73 78 A L G < S+ 0 0 96 -3,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.752 114.5 32.2 -68.5 -24.1 0.7 16.4 9.4 74 79 A I G < S+ 0 0 6 -3,-1.3 2,-2.2 -4,-0.5 -1,-0.2 0.226 78.8 120.3-118.1 15.2 -2.3 18.5 8.4 75 80 A N < + 0 0 38 -3,-0.7 2,-0.3 -4,-0.5 -1,-0.1 -0.193 61.2 83.1 -76.1 48.9 -3.3 16.8 5.2 76 81 A F S S- 0 0 109 -2,-2.2 5,-0.1 -40,-0.2 -3,-0.0 -0.941 98.0 -78.6-144.1 159.5 -6.7 16.1 6.6 77 82 A R > - 0 0 115 -2,-0.3 3,-2.1 1,-0.2 4,-0.2 -0.413 45.2-125.8 -59.7 135.0 -10.0 18.0 7.0 78 83 A P G > S+ 0 0 16 0, 0.0 3,-2.4 0, 0.0 -1,-0.2 0.880 109.6 59.8 -53.0 -38.7 -9.4 20.3 10.0 79 84 A E G 3 S+ 0 0 135 1,-0.3 -2,-0.1 2,-0.2 -70,-0.0 0.688 105.1 50.3 -63.8 -16.5 -12.6 19.0 11.7 80 85 A D G < 0 0 103 -3,-2.1 -1,-0.3 0, 0.0 -3,-0.1 0.342 360.0 360.0 -99.4 4.3 -11.0 15.6 11.6 81 86 A R < 0 0 174 -3,-2.4 -2,-0.2 -4,-0.2 -4,-0.1 0.968 360.0 360.0 78.0 360.0 -7.9 17.1 13.1