==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GLYCOPROTEIN 14-JUL-93 1TTF . COMPND 2 MOLECULE: FIBRONECTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.L.MAIN,T.S.HARVEY,M.BARON,I.D.CAMPBELL . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6769.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 55.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 34 36.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 16.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 194 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -83.1 6.7 18.3 -13.5 2 2 A S + 0 0 55 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.574 360.0 123.9 -74.4 126.9 6.2 14.6 -13.6 3 3 A D + 0 0 85 -2,-0.4 -1,-0.1 3,-0.0 3,-0.1 0.222 32.2 103.0-170.6 27.5 6.8 13.0 -10.2 4 4 A V S S+ 0 0 23 1,-0.2 2,-0.7 20,-0.1 19,-0.2 0.911 76.7 56.9 -86.3 -43.4 3.8 11.0 -9.0 5 5 A P S S+ 0 0 37 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 -0.784 79.0 113.9 -91.0 112.0 5.0 7.4 -9.8 6 6 A R + 0 0 109 -2,-0.7 3,-0.1 17,-0.1 17,-0.1 -0.977 47.3 40.2-171.5 157.8 8.3 6.7 -8.0 7 7 A D + 0 0 104 -2,-0.3 2,-0.9 1,-0.2 -1,-0.1 0.841 65.1 165.2 67.7 33.9 10.1 4.7 -5.3 8 8 A L + 0 0 56 14,-0.1 2,-0.3 12,-0.1 -1,-0.2 -0.719 15.8 130.7 -88.0 105.9 8.2 1.5 -6.2 9 9 A E E -A 21 0A 108 12,-1.9 12,-1.7 -2,-0.9 2,-0.5 -0.941 55.5-105.7-147.9 168.5 9.9 -1.5 -4.6 10 10 A V E -A 20 0A 61 -2,-0.3 10,-0.2 10,-0.2 3,-0.1 -0.839 18.4-169.4-100.4 133.0 9.3 -4.6 -2.5 11 11 A V E - 0 0 101 8,-1.7 2,-0.3 -2,-0.5 -1,-0.1 0.844 62.6 -51.5 -88.1 -35.6 10.3 -4.6 1.2 12 12 A A E -A 19 0A 58 7,-0.7 7,-1.7 2,-0.0 -1,-0.4 -0.961 48.0-113.7 174.6 171.0 9.8 -8.3 1.8 13 13 A A E -A 18 0A 66 -2,-0.3 5,-0.2 5,-0.2 -3,-0.0 -0.770 21.1-168.6-121.7 167.7 7.4 -11.2 1.5 14 14 A T E > -A 17 0A 72 3,-2.7 3,-2.1 -2,-0.3 2,-0.1 -0.976 49.1 -57.8-151.3 161.6 5.6 -13.5 4.0 15 15 A P T 3 S- 0 0 115 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.180 124.6 -18.9 -45.4 103.9 3.7 -16.7 4.1 16 16 A T T 3 S+ 0 0 93 -2,-0.1 45,-0.3 1,-0.1 2,-0.3 0.934 125.8 90.5 59.2 49.2 0.9 -15.9 1.6 17 17 A S E < -A 14 0A 22 -3,-2.1 -3,-2.7 43,-0.2 2,-0.3 -0.875 51.0-165.8-171.9 137.2 1.4 -12.1 1.9 18 18 A L E -AB 13 59A 13 41,-3.2 41,-2.3 -2,-0.3 2,-0.5 -0.960 11.1-146.8-130.3 148.0 3.5 -9.4 0.2 19 19 A L E -AB 12 58A 68 -7,-1.7 -8,-1.7 -2,-0.3 -7,-0.7 -0.935 18.2-179.4-119.5 114.1 4.3 -5.8 1.1 20 20 A I E -AB 10 57A 25 37,-1.7 37,-1.4 -2,-0.5 2,-0.4 -0.833 2.4-173.3-110.0 147.7 4.7 -3.1 -1.6 21 21 A S E +AB 9 56A 27 -12,-1.7 -12,-1.9 -2,-0.3 35,-0.2 -0.996 12.6 154.4-143.5 137.6 5.5 0.5 -1.1 22 22 A W - 0 0 19 33,-1.8 2,-0.3 -2,-0.4 -15,-0.1 -0.168 39.7 -75.1-130.8-135.2 5.7 3.5 -3.4 23 23 A D - 0 0 37 -19,-0.2 -17,-0.1 -2,-0.1 -1,-0.0 -0.877 17.7-160.3-135.3 168.8 5.3 7.3 -3.0 24 24 A A - 0 0 31 -2,-0.3 -20,-0.1 -19,-0.1 31,-0.0 -0.724 19.5-149.4-149.8 93.8 2.7 10.1 -2.4 25 25 A P - 0 0 35 0, 0.0 4,-0.3 0, 0.0 -21,-0.0 0.141 31.1-104.0 -53.6 178.5 3.7 13.7 -3.3 26 26 A A S S+ 0 0 105 2,-0.1 2,-0.1 0, 0.0 3,-0.0 0.678 86.0 111.6 -82.6 -17.6 2.2 16.6 -1.4 27 27 A V S S- 0 0 88 1,-0.2 2,-1.5 49,-0.0 0, 0.0 -0.360 89.3-103.3 -58.8 127.7 -0.2 17.6 -4.2 28 28 A T - 0 0 129 -2,-0.1 49,-0.7 1,-0.1 2,-0.3 -0.283 46.0-157.4 -54.4 88.7 -3.7 16.8 -3.0 29 29 A V - 0 0 25 -2,-1.5 47,-0.2 -4,-0.3 3,-0.1 -0.548 12.1-141.5 -73.7 131.1 -4.0 13.6 -5.0 30 30 A R - 0 0 150 45,-0.5 2,-0.3 -2,-0.3 46,-0.2 0.989 65.9 -45.5 -54.6 -68.8 -7.6 12.7 -5.6 31 31 A Y E -C 75 0B 108 44,-1.7 44,-1.9 20,-0.1 2,-0.3 -0.990 48.3-124.2-161.8 164.3 -7.2 9.0 -5.2 32 32 A Y E -CD 74 50B 5 18,-2.9 18,-1.8 -2,-0.3 2,-0.4 -0.781 12.7-154.9-113.7 158.8 -5.0 6.0 -6.1 33 33 A R E -CD 73 49B 117 40,-0.9 40,-2.2 -2,-0.3 2,-0.6 -0.874 6.1-168.5-139.3 105.5 -5.9 2.7 -7.8 34 34 A I E +CD 72 48B 7 14,-2.0 14,-2.0 -2,-0.4 2,-0.4 -0.826 12.4 174.7 -96.8 120.3 -3.8 -0.4 -7.2 35 35 A T E +CD 71 47B 32 36,-1.8 36,-1.9 -2,-0.6 2,-0.3 -0.978 0.7 172.6-126.6 137.2 -4.6 -3.3 -9.5 36 36 A Y E +CD 70 46B 30 10,-2.1 10,-1.6 -2,-0.4 9,-0.5 -0.974 5.5 172.0-142.2 156.0 -2.8 -6.6 -9.8 37 37 A G E -C 69 0B 17 32,-1.5 32,-1.8 -2,-0.3 2,-0.3 -0.928 33.3-114.4-163.7 137.4 -3.2 -10.0 -11.5 38 38 A E E > -C 68 0B 63 -2,-0.3 3,-0.6 5,-0.2 5,-0.2 -0.570 47.3 -97.8 -76.3 133.0 -1.2 -13.1 -12.0 39 39 A T T 3 S+ 0 0 80 28,-1.0 28,-0.1 -2,-0.3 -1,-0.1 -0.245 93.3 87.8 -50.6 123.2 -0.1 -13.7 -15.6 40 40 A G T 3 S- 0 0 61 -3,-0.1 -1,-0.2 2,-0.0 -2,-0.0 0.006 75.6-131.8 178.7 -54.7 -2.7 -16.2 -17.0 41 41 A G S < S+ 0 0 80 -3,-0.6 -2,-0.1 2,-0.2 -4,-0.0 0.426 74.9 113.4 95.0 -1.3 -5.7 -14.6 -18.5 42 42 A N S S- 0 0 163 1,-0.3 -3,-0.1 0, 0.0 -2,-0.0 0.878 93.2 -32.6 -71.0 -35.9 -8.1 -16.9 -16.7 43 43 A S - 0 0 89 -5,-0.2 -1,-0.3 0, 0.0 -5,-0.2 -0.778 66.7 -98.2 178.0 136.3 -9.5 -14.0 -14.5 44 44 A P - 0 0 117 0, 0.0 -7,-0.2 0, 0.0 3,-0.1 -0.295 29.9-142.0 -61.8 145.9 -8.2 -10.7 -13.0 45 45 A V - 0 0 59 -9,-0.5 2,-0.3 1,-0.2 -8,-0.2 0.978 51.2 -65.3 -73.8 -77.6 -7.3 -11.0 -9.3 46 46 A Q E -D 36 0B 125 -10,-1.6 -10,-2.1 2,-0.0 2,-0.3 -0.992 35.9-153.7-167.6 171.9 -8.4 -7.8 -7.7 47 47 A E E -D 35 0B 75 -2,-0.3 2,-0.3 -12,-0.2 -12,-0.2 -0.975 8.9-170.5-150.8 159.6 -8.1 -4.1 -7.4 48 48 A F E -D 34 0B 71 -14,-2.0 -14,-2.0 -2,-0.3 2,-0.2 -0.945 14.0-138.4-160.2 136.6 -8.7 -1.4 -4.7 49 49 A T E -D 33 0B 93 -2,-0.3 -16,-0.2 -16,-0.2 -2,-0.0 -0.545 18.4-173.4 -92.7 159.7 -8.8 2.4 -4.5 50 50 A V E -D 32 0B 27 -18,-1.8 -18,-2.9 -2,-0.2 2,-1.4 -0.991 38.9-113.1-152.1 143.0 -7.4 4.4 -1.6 51 51 A P - 0 0 97 0, 0.0 -22,-0.1 0, 0.0 -20,-0.1 0.128 61.9-103.1 -64.7 29.9 -7.5 8.2 -0.7 52 52 A G S S+ 0 0 19 -2,-1.4 -23,-0.1 -20,-0.1 -21,-0.1 0.692 98.1 118.0 57.4 13.6 -3.8 8.3 -1.4 53 53 A S + 0 0 106 1,-0.1 2,-0.6 -21,-0.1 -1,-0.1 0.821 56.6 69.5 -80.4 -31.1 -3.5 8.2 2.4 54 54 A K - 0 0 140 1,-0.2 -2,-0.1 2,-0.0 -1,-0.1 -0.784 56.5-175.7 -92.5 119.3 -1.7 4.9 2.5 55 55 A S S S+ 0 0 52 -2,-0.6 -33,-1.8 -34,-0.1 2,-0.2 0.732 75.2 35.9 -82.9 -21.7 1.9 5.1 1.2 56 56 A T E S-B 21 0A 84 -35,-0.2 2,-0.3 2,-0.0 -35,-0.2 -0.603 70.5-161.3-119.5-178.9 2.3 1.3 1.6 57 57 A A E -B 20 0A 10 -37,-1.4 -37,-1.7 -2,-0.2 2,-0.6 -0.941 16.0-139.2-167.6 143.7 0.0 -1.7 1.3 58 58 A T E -B 19 0A 102 -2,-0.3 2,-0.4 -39,-0.2 -39,-0.2 -0.915 24.5-174.6-110.8 112.2 -0.3 -5.3 2.3 59 59 A I E +B 18 0A 24 -41,-2.3 -41,-3.2 -2,-0.6 2,-0.3 -0.851 8.1 167.2-107.9 140.8 -1.6 -7.7 -0.4 60 60 A S + 0 0 59 -2,-0.4 -43,-0.2 -43,-0.2 3,-0.1 -0.956 42.9 71.7-145.5 163.9 -2.4 -11.3 0.1 61 61 A G S S+ 0 0 71 -45,-0.3 -1,-0.1 -2,-0.3 -44,-0.1 0.528 71.9 125.4 104.1 10.8 -4.1 -14.2 -1.7 62 62 A L - 0 0 27 -3,-0.1 -1,-0.3 -25,-0.0 6,-0.0 -0.263 64.9-107.7 -92.0-177.3 -1.4 -14.6 -4.3 63 63 A K - 0 0 113 -2,-0.1 31,-0.1 -3,-0.1 -1,-0.0 -0.934 29.3-131.0-117.6 110.3 0.6 -17.7 -5.3 64 64 A P S S+ 0 0 93 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.292 88.4 36.5 -58.7 137.5 4.3 -17.7 -4.3 65 65 A G S S+ 0 0 58 29,-0.4 2,-0.3 1,-0.3 28,-0.0 0.949 95.8 99.4 85.1 60.3 6.6 -18.6 -7.2 66 66 A V S S- 0 0 31 28,-1.9 28,-1.7 2,-0.0 -1,-0.3 -0.978 74.6 -91.0-169.5 156.9 5.0 -16.9 -10.1 67 67 A D E - E 0 93B 65 -2,-0.3 -28,-1.0 26,-0.2 2,-0.4 -0.507 40.0-168.5 -75.0 142.4 5.0 -13.8 -12.4 68 68 A Y E -CE 38 92B 21 24,-1.9 24,-1.9 -30,-0.2 2,-0.5 -0.990 12.0-151.5-137.9 130.2 2.9 -10.9 -11.3 69 69 A T E -CE 37 91B 57 -32,-1.8 -32,-1.5 -2,-0.4 2,-0.3 -0.865 16.1-170.9-102.6 126.0 1.9 -7.8 -13.2 70 70 A I E -CE 36 90B 44 20,-1.8 20,-2.0 -2,-0.5 2,-0.4 -0.876 6.2-175.5-115.9 148.5 1.2 -4.6 -11.2 71 71 A T E -CE 35 89B 31 -36,-1.9 -36,-1.8 -2,-0.3 2,-0.6 -0.944 7.9-161.4-145.5 121.5 -0.3 -1.3 -12.4 72 72 A V E -CE 34 88B 10 16,-1.7 16,-1.6 -2,-0.4 2,-0.8 -0.898 2.6-164.7-108.4 122.1 -0.8 1.9 -10.3 73 73 A Y E -C 33 0B 109 -40,-2.2 -40,-0.9 -2,-0.6 2,-0.7 -0.871 7.0-168.6-105.5 101.9 -3.2 4.5 -11.6 74 74 A A E -C 32 0B 7 -2,-0.8 2,-0.5 -42,-0.2 12,-0.3 -0.811 4.3-171.1 -95.1 113.3 -2.6 7.8 -9.9 75 75 A V E +C 31 0B 47 -44,-1.9 -44,-1.7 -2,-0.7 -45,-0.5 -0.887 6.7 176.7-107.5 128.4 -5.4 10.3 -10.5 76 76 A T + 0 0 38 -2,-0.5 2,-0.3 7,-0.4 -47,-0.2 -0.806 1.9 169.3-122.7 165.2 -5.0 13.9 -9.4 77 77 A G - 0 0 24 -49,-0.7 -2,-0.0 -2,-0.3 7,-0.0 -0.954 36.0-140.4-171.8 152.5 -7.2 17.0 -9.8 78 78 A R S S- 0 0 240 -2,-0.3 -1,-0.1 3,-0.0 -50,-0.0 0.706 90.6 -43.7 -92.3 -22.2 -7.7 20.6 -8.7 79 79 A G S S- 0 0 59 2,-0.1 -2,-0.0 4,-0.0 0, 0.0 0.171 112.0 -36.9-172.6 -47.1 -11.5 20.4 -8.5 80 80 A D S S+ 0 0 155 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 0.314 86.5 132.7-173.9 -4.7 -13.0 18.7 -11.5 81 81 A S S S- 0 0 60 1,-0.2 2,-1.0 3,-0.0 -2,-0.1 -0.083 77.4 -93.1 -57.0 163.3 -11.0 19.6 -14.6 82 82 A P + 0 0 123 0, 0.0 2,-0.9 0, 0.0 -1,-0.2 0.096 61.4 168.8 -68.1 30.1 -10.0 16.8 -17.0 83 83 A A - 0 0 38 -2,-1.0 -7,-0.4 1,-0.1 2,-0.4 -0.197 14.7-169.7 -49.1 91.3 -6.7 16.6 -15.0 84 84 A S - 0 0 112 -2,-0.9 -9,-0.1 -9,-0.1 -1,-0.1 -0.713 1.6-158.8 -89.9 137.4 -5.4 13.4 -16.5 85 85 A S - 0 0 35 -2,-0.4 -10,-0.1 -9,-0.0 -1,-0.1 -0.047 25.2 -96.6 -96.6-158.1 -2.4 11.8 -14.9 86 86 A K - 0 0 126 -12,-0.3 -12,-0.1 -2,-0.0 -82,-0.1 -0.823 35.5-160.4-128.4 92.6 0.2 9.3 -16.1 87 87 A P - 0 0 60 0, 0.0 2,-0.3 0, 0.0 -14,-0.2 -0.265 10.8-165.1 -67.9 158.2 -0.5 5.7 -15.2 88 88 A I E -E 72 0B 73 -16,-1.6 -16,-1.7 2,-0.0 2,-0.3 -0.998 10.1-168.3-147.4 150.5 2.3 3.1 -15.2 89 89 A S E +E 71 0B 71 -2,-0.3 2,-0.3 -18,-0.2 -18,-0.2 -0.985 4.9 178.7-139.5 150.4 2.7 -0.6 -15.2 90 90 A I E -E 70 0B 87 -20,-2.0 -20,-1.8 -2,-0.3 2,-0.3 -0.991 22.4-130.9-152.3 141.9 5.6 -3.1 -14.7 91 91 A N E +E 69 0B 119 -2,-0.3 2,-0.3 -22,-0.2 -22,-0.2 -0.697 30.3 170.5 -93.2 145.5 6.0 -6.8 -14.6 92 92 A Y E -E 68 0B 129 -24,-1.9 -24,-1.9 -2,-0.3 2,-0.6 -0.978 34.6-120.0-156.3 140.7 8.0 -8.5 -11.8 93 93 A R E E 67 0B 177 -2,-0.3 -26,-0.2 -26,-0.2 -24,-0.0 -0.706 360.0 360.0 -84.0 119.0 8.6 -12.0 -10.5 94 94 A T 0 0 36 -28,-1.7 -28,-1.9 -2,-0.6 -29,-0.4 -0.630 360.0 360.0-121.7 360.0 7.4 -12.4 -6.9