==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 03-OCT-11 3U2B . COMPND 2 MOLECULE: DNA (5'-D(*GP*TP*CP*TP*CP*TP*AP*TP*TP*GP*TP*CP*CP . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.JAUCH,C.K.L.NG,P.R.KOLATKAR . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6872.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 71.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 42 55.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 C G 0 0 130 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-141.6 15.5 -22.9 -13.0 2 2 C H - 0 0 166 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.947 360.0-154.2-129.1 114.0 16.2 -20.3 -10.3 3 3 C I - 0 0 67 -2,-0.5 2,-0.1 1,-0.0 64,-0.0 -0.699 19.4-132.2 -86.3 131.0 13.5 -18.5 -8.2 4 4 C K - 0 0 164 -2,-0.4 -1,-0.0 1,-0.1 68,-0.0 -0.351 21.1-112.3 -76.7 160.5 14.4 -15.1 -6.8 5 5 C R - 0 0 145 1,-0.1 -1,-0.1 -2,-0.1 55,-0.0 -0.673 41.1 -88.8 -94.3 152.2 13.8 -14.1 -3.2 6 6 C P - 0 0 41 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.078 40.8-106.1 -58.2 153.7 11.2 -11.5 -2.2 7 7 C M - 0 0 68 4,-0.1 52,-0.1 49,-0.1 53,-0.1 -0.727 33.1-140.8 -83.1 124.1 12.0 -7.8 -2.0 8 8 C N > - 0 0 90 -2,-0.5 4,-2.3 1,-0.1 3,-0.3 -0.282 35.7 -88.8 -76.3 169.6 12.3 -6.5 1.6 9 9 C A H > S+ 0 0 19 1,-0.3 4,-1.9 2,-0.2 5,-0.1 0.822 128.9 47.6 -49.7 -38.9 10.9 -3.1 2.7 10 10 C F H > S+ 0 0 50 2,-0.2 4,-1.2 1,-0.2 -1,-0.3 0.908 109.4 51.3 -71.1 -43.9 14.2 -1.4 1.7 11 11 C M H > S+ 0 0 86 -3,-0.3 4,-1.8 2,-0.2 -2,-0.2 0.848 110.2 51.3 -62.2 -33.9 14.5 -3.0 -1.7 12 12 C V H X S+ 0 0 9 -4,-2.3 4,-1.1 1,-0.2 -1,-0.2 0.938 112.0 44.3 -68.3 -48.6 10.9 -1.9 -2.4 13 13 C W H X S+ 0 0 17 -4,-1.9 4,-1.5 -5,-0.2 -1,-0.2 0.672 109.5 63.8 -65.3 -18.4 11.6 1.7 -1.5 14 14 C S H X S+ 0 0 5 -4,-1.2 4,-3.5 2,-0.2 5,-0.3 0.948 95.8 52.5 -73.2 -52.5 14.8 1.2 -3.5 15 15 C Q H X S+ 0 0 92 -4,-1.8 4,-2.2 1,-0.2 5,-0.2 0.946 111.6 46.5 -47.7 -58.7 13.3 0.7 -6.9 16 16 C I H X S+ 0 0 72 -4,-1.1 4,-1.6 1,-0.2 -1,-0.2 0.930 117.9 41.1 -51.1 -56.6 11.2 3.8 -6.7 17 17 C E H X S+ 0 0 27 -4,-1.5 4,-1.1 1,-0.2 -1,-0.2 0.910 110.3 57.8 -61.1 -44.6 14.0 6.1 -5.5 18 18 C R H X S+ 0 0 53 -4,-3.5 4,-3.5 1,-0.2 3,-0.5 0.877 104.8 52.0 -56.5 -41.0 16.6 4.5 -7.8 19 19 C R H X S+ 0 0 138 -4,-2.2 4,-2.5 -5,-0.3 5,-0.3 0.951 105.1 54.1 -58.1 -51.9 14.5 5.4 -10.9 20 20 C K H < S+ 0 0 104 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.695 116.0 41.8 -59.2 -18.7 14.2 9.0 -9.7 21 21 C I H >X S+ 0 0 12 -4,-1.1 4,-4.5 -3,-0.5 3,-0.6 0.848 111.1 52.6 -89.7 -46.0 18.0 9.0 -9.6 22 22 C M H 3< S+ 0 0 93 -4,-3.5 -2,-0.2 1,-0.3 -3,-0.2 0.757 112.1 48.3 -61.3 -25.5 18.5 7.0 -12.8 23 23 C E T 3< S+ 0 0 151 -4,-2.5 -1,-0.3 -5,-0.2 -2,-0.2 0.689 119.7 37.4 -86.9 -22.1 16.3 9.6 -14.6 24 24 C Q T <4 S+ 0 0 155 -3,-0.6 -2,-0.2 -5,-0.3 -3,-0.1 0.810 131.8 26.6 -96.2 -39.8 18.2 12.5 -13.1 25 25 C S S >< S+ 0 0 49 -4,-4.5 3,-1.3 1,-0.1 -1,-0.2 -0.727 70.5 174.8-124.7 80.6 21.7 11.1 -13.2 26 26 C P T 3 S+ 0 0 96 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.671 79.6 40.8 -62.8 -21.7 21.6 8.6 -16.1 27 27 C D T 3 S+ 0 0 163 2,-0.1 2,-0.4 3,-0.0 -5,-0.1 0.332 79.9 117.9-114.7 6.1 25.4 7.8 -15.9 28 28 C M S < S- 0 0 37 -3,-1.3 -3,-0.1 -7,-0.2 5,-0.1 -0.616 74.2-110.7 -69.6 126.9 25.9 7.7 -12.1 29 29 C H >> - 0 0 132 -2,-0.4 4,-1.5 1,-0.1 3,-0.5 -0.264 15.6-125.9 -64.7 147.0 27.0 4.1 -11.3 30 30 C N H 3> S+ 0 0 74 1,-0.2 4,-2.5 2,-0.2 5,-0.1 0.779 107.3 63.1 -65.8 -27.6 24.6 1.9 -9.5 31 31 C A H 3> S+ 0 0 46 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.898 106.9 43.8 -62.3 -42.0 27.1 1.1 -6.8 32 32 C E H <> S+ 0 0 88 -3,-0.5 4,-2.1 2,-0.2 -1,-0.2 0.805 109.8 57.1 -72.2 -31.0 27.2 4.8 -5.8 33 33 C I H X S+ 0 0 2 -4,-1.5 4,-2.8 2,-0.2 -2,-0.2 0.914 104.7 51.8 -64.7 -42.8 23.4 4.9 -6.0 34 34 C S H X S+ 0 0 56 -4,-2.5 4,-2.7 2,-0.2 -2,-0.2 0.908 106.9 53.9 -57.3 -44.8 23.3 2.1 -3.5 35 35 C K H X S+ 0 0 117 -4,-1.5 4,-1.1 1,-0.2 -2,-0.2 0.937 113.0 41.9 -54.7 -50.1 25.6 4.1 -1.2 36 36 C R H X S+ 0 0 143 -4,-2.1 4,-2.7 2,-0.2 5,-0.2 0.857 111.7 55.5 -69.5 -36.4 23.3 7.1 -1.4 37 37 C L H X S+ 0 0 1 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.962 104.9 52.6 -57.9 -53.6 20.1 5.0 -1.0 38 38 C G H X S+ 0 0 27 -4,-2.7 4,-0.9 1,-0.2 -1,-0.2 0.802 112.7 46.5 -52.1 -32.7 21.4 3.4 2.2 39 39 C K H X S+ 0 0 145 -4,-1.1 4,-0.6 -5,-0.2 3,-0.3 0.908 110.8 48.6 -79.2 -44.8 21.9 6.9 3.5 40 40 C R H >X S+ 0 0 117 -4,-2.7 4,-2.1 1,-0.2 3,-0.8 0.832 105.6 61.9 -62.1 -32.7 18.6 8.4 2.5 41 41 C W H 3< S+ 0 0 43 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.898 100.9 51.3 -59.7 -41.0 17.0 5.3 4.1 42 42 C K H 3< S+ 0 0 178 -4,-0.9 -1,-0.3 -3,-0.3 -2,-0.2 0.627 108.7 54.2 -72.8 -12.7 18.4 6.3 7.4 43 43 C L H << S+ 0 0 133 -3,-0.8 -2,-0.2 -4,-0.6 2,-0.2 0.874 84.3 91.2 -84.9 -44.3 16.9 9.8 6.9 44 44 C L S < S- 0 0 44 -4,-2.1 5,-0.1 1,-0.1 0, 0.0 -0.357 88.1-116.3 -56.2 116.9 13.3 8.6 6.2 45 45 C K > - 0 0 154 -2,-0.2 4,-0.9 1,-0.1 3,-0.5 -0.153 22.1-110.9 -55.8 152.5 11.7 8.6 9.6 46 46 C D H >> S+ 0 0 129 1,-0.2 3,-1.0 2,-0.2 4,-0.7 0.882 115.7 57.5 -52.6 -46.0 10.5 5.3 11.0 47 47 C S H >4 S+ 0 0 74 1,-0.3 3,-1.3 2,-0.2 -1,-0.2 0.898 103.0 53.5 -54.1 -44.3 6.8 6.1 10.6 48 48 C D H 34 S+ 0 0 79 -3,-0.5 4,-0.3 1,-0.3 -1,-0.3 0.763 100.7 63.4 -63.1 -24.8 7.2 6.8 6.9 49 49 C K H XX S+ 0 0 33 -3,-1.0 4,-1.5 -4,-0.9 3,-0.8 0.684 81.0 82.1 -75.7 -20.1 8.8 3.3 6.5 50 50 C I H XX S+ 0 0 84 -3,-1.3 4,-2.5 -4,-0.7 3,-0.8 0.930 82.3 59.2 -51.6 -54.8 5.6 1.5 7.6 51 51 C P H 3> S+ 0 0 66 0, 0.0 4,-2.4 0, 0.0 -1,-0.2 0.824 109.8 45.2 -45.7 -37.6 3.9 1.7 4.1 52 52 C F H <> S+ 0 0 44 -3,-0.8 4,-3.4 -4,-0.3 -2,-0.2 0.786 108.3 55.1 -80.3 -29.8 6.9 -0.2 2.6 53 53 C I H X S+ 0 0 88 -4,-0.8 4,-2.1 -3,-0.3 3,-1.1 0.971 104.0 43.9 -70.0 -55.6 4.8 -8.1 3.5 58 58 C R H 3X S+ 0 0 125 -4,-1.9 4,-2.8 1,-0.3 5,-0.3 0.864 107.6 63.5 -55.2 -36.0 2.1 -8.8 0.9 59 59 C L H 3X S+ 0 0 50 -4,-1.7 4,-0.9 -5,-0.2 -1,-0.3 0.841 106.7 42.9 -57.4 -34.8 5.1 -9.3 -1.5 60 60 C R H