==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 29-JUL-04 1U62 . COMPND 2 MOLECULE: HUMAN LACTOFERRIN-BASED PEPTIDE FQWQRNIRKVR; . SOURCE 2 SYNTHETIC: YES; . AUTHOR B.JAPELJ,P.PRISTOVSEK,A.MAJERLE,R.JERALA . 11 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1695.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 27.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 27.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 204 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 89.2 2.1 0.0 -1.2 2 2 A Q - 0 0 194 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.526 360.0-130.5 -67.8 108.3 5.5 -1.5 -0.6 3 3 A W - 0 0 99 -2,-0.7 -1,-0.1 1,-0.1 3,-0.1 -0.222 7.2-140.5 -57.9 149.2 7.8 0.6 -2.7 4 4 A Q S S+ 0 0 156 1,-0.1 2,-0.3 2,-0.1 -1,-0.1 0.981 82.9 36.3 -76.0 -64.9 10.2 -1.4 -4.9 5 5 A R S S- 0 0 123 1,-0.1 2,-0.9 0, 0.0 -1,-0.1 -0.678 109.0 -83.8 -93.3 146.1 13.4 0.6 -4.6 6 6 A N + 0 0 171 -2,-0.3 2,-0.2 -3,-0.1 -1,-0.1 -0.240 68.0 173.6 -49.0 91.5 14.5 2.3 -1.3 7 7 A I - 0 0 74 -2,-0.9 3,-0.1 1,-0.1 -4,-0.1 -0.610 35.9-133.2-103.2 165.0 12.4 5.4 -1.9 8 8 A R - 0 0 216 1,-0.3 2,-0.3 -2,-0.2 -1,-0.1 0.976 67.1 -47.5 -78.6 -73.1 11.8 8.3 0.5 9 9 A K - 0 0 113 0, 0.0 2,-0.5 0, 0.0 -1,-0.3 -0.971 38.0-124.3-159.9 164.9 8.0 8.9 0.3 10 10 A V 0 0 97 -2,-0.3 -3,-0.0 1,-0.1 0, 0.0 -0.797 360.0 360.0-121.4 86.6 5.2 9.3 -2.1 11 11 A R 0 0 248 -2,-0.5 -1,-0.1 0, 0.0 0, 0.0 0.747 360.0 360.0 -70.4 360.0 3.4 12.6 -1.4