==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 02-JUN-03 1UFM . COMPND 2 MOLECULE: COP9 COMPLEX SUBUNIT 4; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR S.SUZUKI,H.HATANAKA,T.KIGAWA,M.SHIROUZU,Y.HAYASHIZAKI,THE . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6062.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 59.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 10.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 289 A G 0 0 124 0, 0.0 2,-1.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 94.0 -18.0 11.7 1.7 2 290 A S + 0 0 136 0, 0.0 2,-0.3 0, 0.0 3,-0.1 -0.588 360.0 174.9 -74.8 94.3 -15.6 14.4 2.7 3 291 A S - 0 0 94 -2,-1.4 0, 0.0 1,-0.1 0, 0.0 -0.737 38.8-117.3-103.4 152.1 -12.3 12.9 1.4 4 292 A G + 0 0 70 -2,-0.3 -1,-0.1 2,-0.1 0, 0.0 0.956 40.7 171.2 -46.3 -79.7 -8.9 14.6 1.4 5 293 A S - 0 0 89 1,-0.2 2,-0.7 -3,-0.1 -2,-0.0 0.985 14.1-165.4 60.4 84.4 -8.3 14.7 -2.3 6 294 A S + 0 0 49 1,-0.2 -1,-0.2 37,-0.0 3,-0.1 -0.883 19.2 161.4-106.6 104.5 -5.2 16.8 -2.6 7 295 A G - 0 0 63 -2,-0.7 2,-0.5 1,-0.3 -1,-0.2 0.916 64.1 -4.4 -82.0 -89.1 -4.6 18.0 -6.2 8 296 A G S S+ 0 0 76 1,-0.1 -1,-0.3 3,-0.0 3,-0.1 -0.953 81.7 108.0-116.7 128.0 -2.3 21.0 -6.4 9 297 A S S S+ 0 0 116 -2,-0.5 2,-0.4 1,-0.3 -1,-0.1 0.267 77.2 30.7-156.9 -53.5 -0.8 22.7 -3.3 10 298 A S - 0 0 54 1,-0.0 -1,-0.3 2,-0.0 0, 0.0 -0.985 47.4-166.8-126.6 132.8 2.8 21.9 -2.9 11 299 A I + 0 0 172 -2,-0.4 3,-0.3 -3,-0.1 -1,-0.0 -0.048 37.2 157.6-103.8 28.6 5.4 21.2 -5.6 12 300 A L - 0 0 59 1,-0.2 2,-0.5 2,-0.1 3,-0.0 0.117 63.2 -58.4 -45.5 169.1 7.9 19.9 -3.1 13 301 A D > - 0 0 99 1,-0.2 4,-1.3 2,-0.1 -1,-0.2 -0.405 52.0-171.2 -58.8 107.5 10.6 17.6 -4.4 14 302 A R H > S+ 0 0 145 -2,-0.5 4,-2.3 -3,-0.3 -1,-0.2 0.771 83.9 62.0 -72.1 -27.2 8.6 14.8 -5.9 15 303 A A H > S+ 0 0 59 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.859 100.4 53.8 -65.7 -36.5 11.8 12.8 -6.3 16 304 A V H > S+ 0 0 58 2,-0.2 4,-4.4 1,-0.2 5,-0.2 0.924 108.7 48.0 -63.1 -46.2 12.3 12.9 -2.6 17 305 A I H X S+ 0 0 7 -4,-1.3 4,-2.9 2,-0.2 -2,-0.2 0.912 111.3 51.4 -60.2 -44.6 8.8 11.4 -2.0 18 306 A E H X S+ 0 0 45 -4,-2.3 4,-1.3 2,-0.2 -2,-0.2 0.926 118.0 37.3 -57.8 -48.4 9.5 8.8 -4.6 19 307 A H H X S+ 0 0 110 -4,-2.7 4,-3.7 2,-0.2 3,-0.2 0.917 114.6 54.9 -69.7 -45.4 12.8 7.8 -2.9 20 308 A N H X S+ 0 0 38 -4,-4.4 4,-3.5 1,-0.3 5,-0.3 0.870 106.0 53.8 -54.9 -39.0 11.3 8.4 0.6 21 309 A L H X S+ 0 0 0 -4,-2.9 4,-1.6 -5,-0.2 -1,-0.3 0.885 113.3 41.8 -62.8 -40.0 8.6 5.9 -0.4 22 310 A L H X S+ 0 0 26 -4,-1.3 4,-0.9 -3,-0.2 -2,-0.2 0.861 115.2 50.9 -74.2 -37.7 11.3 3.4 -1.3 23 311 A S H >X S+ 0 0 46 -4,-3.7 4,-0.9 2,-0.2 3,-0.6 0.916 112.6 45.2 -65.1 -45.1 13.3 4.3 1.8 24 312 A A H 3< S+ 0 0 1 -4,-3.5 4,-0.4 1,-0.3 -1,-0.2 0.852 106.7 60.3 -66.3 -35.5 10.3 3.8 4.0 25 313 A S H 3< S+ 0 0 5 -4,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.760 113.4 37.5 -62.7 -25.3 9.5 0.6 2.2 26 314 A K H << S+ 0 0 118 -4,-0.9 -1,-0.3 -3,-0.6 -2,-0.2 0.541 129.7 34.6-100.2 -13.1 12.9 -0.6 3.3 27 315 A L S < S+ 0 0 119 -4,-0.9 2,-0.5 1,-0.3 -3,-0.2 0.796 112.6 46.6-101.6 -82.2 12.6 1.1 6.7 28 316 A Y - 0 0 122 -4,-0.4 -1,-0.3 1,-0.2 3,-0.2 -0.541 66.5-153.5 -70.3 118.2 9.0 1.1 8.0 29 317 A N S S+ 0 0 90 -2,-0.5 44,-1.0 1,-0.3 2,-0.3 0.890 83.0 0.6 -57.1 -41.4 7.5 -2.3 7.7 30 318 A N E S+A 72 0A 92 42,-0.1 2,-0.3 -3,-0.0 -1,-0.3 -0.975 70.5 171.8-152.9 135.8 4.1 -0.7 7.5 31 319 A I E -A 71 0A 10 40,-1.0 40,-2.0 -2,-0.3 2,-0.1 -0.994 27.0-121.5-146.2 147.1 3.0 2.9 7.7 32 320 A T E > -A 70 0A 50 -2,-0.3 4,-4.2 38,-0.2 5,-0.3 -0.412 30.7-109.6 -85.1 163.3 -0.3 4.7 7.2 33 321 A F H > S+ 0 0 21 36,-0.9 4,-2.8 1,-0.2 5,-0.2 0.848 119.8 55.1 -58.9 -36.4 -1.0 7.4 4.6 34 322 A E H > S+ 0 0 159 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.937 117.1 34.1 -62.4 -49.2 -1.2 9.9 7.5 35 323 A E H > S+ 0 0 116 2,-0.2 4,-1.8 1,-0.2 -2,-0.2 0.910 118.3 52.6 -72.2 -44.7 2.2 9.0 8.8 36 324 A L H X S+ 0 0 0 -4,-4.2 4,-1.7 1,-0.2 6,-0.3 0.893 112.5 46.3 -57.3 -42.0 3.6 8.3 5.4 37 325 A G H <>S+ 0 0 1 -4,-2.8 5,-1.6 -5,-0.3 4,-0.3 0.817 108.7 55.3 -69.8 -32.3 2.4 11.7 4.3 38 326 A A H <5S+ 0 0 64 -4,-1.4 -1,-0.2 3,-0.2 -2,-0.2 0.787 107.6 50.7 -70.1 -28.2 3.8 13.2 7.5 39 327 A L H <5S+ 0 0 60 -4,-1.8 -2,-0.2 1,-0.2 -1,-0.2 0.875 118.3 36.2 -75.6 -39.9 7.2 11.7 6.6 40 328 A L T <5S- 0 0 2 -4,-1.7 -2,-0.2 2,-0.2 -1,-0.2 0.366 110.5-123.2 -92.1 2.5 7.1 13.2 3.1 41 329 A E T 5S+ 0 0 168 -4,-0.3 -3,-0.2 1,-0.3 -4,-0.1 0.599 77.3 119.1 65.0 10.1 5.4 16.3 4.5 42 330 A I S - 0 0 47 0, 0.0 4,-3.5 0, 0.0 5,-0.3 -0.340 31.6-114.0 -75.0 157.9 -1.0 14.6 2.6 44 332 A A H > S+ 0 0 29 1,-0.3 4,-2.7 2,-0.2 5,-0.2 0.830 119.7 58.3 -58.7 -32.8 -2.3 11.0 2.9 45 333 A A H > S+ 0 0 16 2,-0.2 4,-2.3 1,-0.2 -1,-0.3 0.904 112.0 39.0 -63.2 -43.0 -4.2 11.7 -0.3 46 334 A K H > S+ 0 0 31 -3,-0.3 4,-3.9 2,-0.2 5,-0.3 0.927 119.0 46.2 -72.0 -47.4 -0.9 12.5 -2.1 47 335 A A H X S+ 0 0 0 -4,-3.5 4,-2.4 1,-0.2 -2,-0.2 0.815 114.2 51.4 -63.8 -31.0 1.0 9.8 -0.3 48 336 A E H X S+ 0 0 67 -4,-2.7 4,-2.2 -5,-0.3 -2,-0.2 0.926 116.1 37.9 -71.1 -47.4 -1.8 7.5 -1.1 49 337 A K H X S+ 0 0 117 -4,-2.3 4,-3.9 2,-0.2 -2,-0.2 0.918 120.0 47.7 -69.3 -45.3 -1.9 8.3 -4.8 50 338 A I H X S+ 0 0 8 -4,-3.9 4,-3.2 2,-0.2 -2,-0.2 0.929 112.8 48.7 -60.5 -47.7 1.9 8.5 -5.0 51 339 A A H X S+ 0 0 0 -4,-2.4 4,-1.7 -5,-0.3 -1,-0.2 0.913 116.8 42.6 -58.1 -45.2 2.2 5.2 -3.1 52 340 A S H X S+ 0 0 49 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.898 114.4 50.6 -67.7 -42.3 -0.3 3.7 -5.5 53 341 A Q H X S+ 0 0 98 -4,-3.9 4,-2.2 1,-0.2 6,-0.3 0.864 108.0 54.1 -63.1 -37.6 1.2 5.4 -8.5 54 342 A M H <>S+ 0 0 1 -4,-3.2 6,-1.5 2,-0.2 5,-1.3 0.891 108.4 48.2 -63.5 -41.6 4.6 4.0 -7.4 55 343 A I H ><5S+ 0 0 41 -4,-1.7 3,-0.8 4,-0.2 -2,-0.2 0.902 113.7 46.9 -65.2 -42.6 3.3 0.5 -7.3 56 344 A T H 3<5S+ 0 0 123 -4,-2.2 -2,-0.2 1,-0.3 -1,-0.2 0.823 110.7 52.5 -67.8 -32.6 1.8 0.9 -10.7 57 345 A E T 3<5S- 0 0 130 -4,-2.2 -1,-0.3 -5,-0.2 -2,-0.2 0.515 114.5-120.9 -79.9 -6.0 5.0 2.4 -11.9 58 346 A G T < 5S+ 0 0 51 -3,-0.8 -3,-0.2 -4,-0.3 -4,-0.1 0.325 85.5 117.2 81.9 -7.6 6.8 -0.6 -10.6 59 347 A R S > +B 70 0A 22 5,-2.6 5,-0.9 -2,-0.5 4,-0.8 -0.782 23.6 173.8 -89.9 110.0 -4.6 -2.0 2.0 66 354 A Q T 45S+ 0 0 154 -2,-0.8 -1,-0.2 3,-0.2 5,-0.1 0.597 75.2 68.0 -88.2 -14.4 -7.8 -0.0 1.7 67 355 A I T 45S+ 0 0 157 1,-0.2 -1,-0.2 3,-0.1 -2,-0.1 0.899 123.0 13.9 -70.3 -42.4 -9.4 -2.2 4.4 68 356 A D T 45S- 0 0 114 2,-0.2 -2,-0.2 0, 0.0 -1,-0.2 0.513 103.0-125.0-107.4 -13.1 -7.1 -0.8 7.0 69 357 A G T <5 + 0 0 21 -4,-0.8 -36,-0.9 1,-0.3 2,-0.4 0.798 65.8 135.2 71.3 30.2 -5.9 2.1 4.9 70 358 A I E < -AB 32 65A 40 -5,-0.9 -5,-2.6 -38,-0.2 2,-0.6 -0.864 57.9-122.0-112.9 146.6 -2.3 1.0 5.5 71 359 A V E -AB 31 64A 0 -40,-2.0 -40,-1.0 -2,-0.4 2,-0.8 -0.783 21.3-144.2 -90.5 119.7 0.4 0.8 2.9 72 360 A H E -AB 30 63A 63 -9,-1.7 -9,-0.7 -2,-0.6 2,-0.3 -0.757 21.7-169.3 -87.4 110.8 1.9 -2.7 2.7 73 361 A F E - B 0 62A 13 -44,-1.0 2,-0.2 -2,-0.8 -11,-0.1 -0.712 23.1-110.0-101.4 152.2 5.6 -2.4 2.0 74 362 A E - 0 0 95 -13,-0.7 2,-0.4 -2,-0.3 -13,-0.1 -0.566 28.9-144.5 -81.1 142.4 8.0 -5.2 1.0 75 363 A T - 0 0 65 -2,-0.2 -49,-0.1 1,-0.1 -48,-0.0 -0.859 27.9 -94.5-110.3 143.5 10.6 -6.3 3.5 76 364 A R S S+ 0 0 195 -2,-0.4 -1,-0.1 1,-0.2 -50,-0.0 -0.241 106.7 16.1 -54.1 136.0 14.1 -7.4 2.7 77 365 A E S S+ 0 0 205 1,-0.2 2,-0.3 2,-0.0 -1,-0.2 0.996 93.2 136.2 60.1 77.2 14.3 -11.2 2.3 78 366 A A + 0 0 71 1,-0.1 -1,-0.2 -4,-0.0 -4,-0.0 -0.988 20.9 152.7-151.8 151.8 10.7 -12.2 2.0 79 367 A S - 0 0 135 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.421 45.2-123.0-142.1 -59.6 8.6 -14.5 -0.2 80 368 A G + 0 0 61 3,-0.0 -1,-0.2 0, 0.0 3,-0.1 -0.998 58.2 3.4 144.2-144.1 5.4 -15.6 1.6 81 369 A P S S- 0 0 126 0, 0.0 2,-0.6 0, 0.0 0, 0.0 -0.277 88.5 -78.3 -75.0 163.7 3.9 -19.0 2.5 82 370 A S - 0 0 132 1,-0.1 2,-0.1 2,-0.1 0, 0.0 -0.509 51.7-138.3 -66.5 111.2 5.6 -22.3 1.9 83 371 A S 0 0 126 -2,-0.6 -1,-0.1 1,-0.1 -3,-0.0 -0.458 360.0 360.0 -72.9 142.7 5.1 -23.0 -1.8 84 372 A G 0 0 125 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.343 360.0 360.0 157.4 360.0 4.2 -26.5 -2.8