==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 09-SEP-03 1UL5 . COMPND 2 MOLECULE: SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR K.YAMASAKI,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7718.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 51.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 16.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 16.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 135 A V 0 0 127 0, 0.0 2,-2.2 0, 0.0 12,-0.1 0.000 360.0 360.0 360.0 107.4 -8.9 19.4 -14.7 2 136 A A + 0 0 22 12,-0.1 2,-0.3 22,-0.1 19,-0.1 -0.387 360.0 112.0 -63.9 81.2 -8.4 19.9 -10.9 3 137 A R S S- 0 0 128 -2,-2.2 2,-0.8 18,-0.2 9,-0.2 -0.836 72.0-121.4-160.1 117.3 -11.9 18.9 -10.0 4 138 A C - 0 0 0 -2,-0.3 7,-0.8 7,-0.2 2,-0.5 -0.435 26.7-170.9 -62.0 101.5 -13.1 15.8 -8.1 5 139 A Q E +A 10 0A 82 19,-1.2 5,-0.2 -2,-0.8 -1,-0.2 -0.193 32.5 141.1 -90.0 42.7 -15.5 14.2 -10.7 6 140 A V E > -A 9 0A 0 3,-1.4 3,-1.1 -2,-0.5 30,-0.1 -0.772 52.1-139.9 -90.1 119.0 -16.9 11.7 -8.2 7 141 A P T 3 S+ 0 0 63 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.871 107.0 36.9 -40.1 -52.4 -20.6 11.1 -8.7 8 142 A D T 3 S+ 0 0 75 1,-0.2 2,-0.4 28,-0.1 29,-0.1 0.675 127.1 42.0 -77.3 -18.0 -21.2 10.9 -4.9 9 143 A C E < -A 6 0A 23 -3,-1.1 -3,-1.4 2,-0.1 2,-1.2 -0.833 62.5-179.7-135.4 97.9 -18.6 13.6 -4.4 10 144 A E E +A 5 0A 160 -2,-0.4 2,-0.2 -3,-0.2 -5,-0.2 -0.659 22.5 169.4 -96.9 78.4 -18.5 16.6 -6.7 11 145 A A - 0 0 25 -2,-1.2 2,-0.3 -7,-0.8 -7,-0.2 -0.545 34.6-142.0 -90.2 156.5 -15.6 18.6 -5.3 12 146 A D + 0 0 111 -9,-0.2 2,-3.1 -2,-0.2 3,-0.3 -0.525 23.2 175.7-115.9 62.6 -13.9 21.6 -6.9 13 147 A I + 0 0 9 -2,-0.3 3,-0.4 1,-0.2 12,-0.1 -0.355 22.3 145.5 -67.9 69.4 -10.3 21.0 -6.0 14 148 A S S S+ 0 0 77 -2,-3.1 2,-0.3 1,-0.3 -1,-0.2 0.679 71.6 39.6 -81.1 -18.9 -9.1 24.0 -8.0 15 149 A E S S+ 0 0 171 -3,-0.3 2,-0.3 -13,-0.0 -1,-0.3 -0.660 81.8 134.1-133.8 79.2 -6.3 24.7 -5.5 16 150 A L - 0 0 46 -3,-0.4 2,-0.3 -2,-0.3 -14,-0.0 -0.892 37.4-158.3-126.0 156.3 -4.7 21.5 -4.3 17 151 A K + 0 0 216 -2,-0.3 2,-0.3 4,-0.0 -2,-0.0 -0.665 58.8 61.2-135.9 79.7 -1.1 20.3 -3.8 18 152 A G S S- 0 0 41 -2,-0.3 4,-0.4 0, 0.0 3,-0.3 -0.906 97.1 -66.3-170.1-163.2 -0.8 16.6 -3.8 19 153 A Y S S+ 0 0 104 -2,-0.3 -3,-0.0 1,-0.2 0, 0.0 0.281 119.9 65.7 -89.9 10.4 -1.3 13.3 -5.7 20 154 A H S > >S+ 0 0 20 2,-0.1 5,-2.1 1,-0.1 3,-1.0 0.710 92.1 57.6-100.5 -28.3 -5.1 13.8 -5.6 21 155 A K G > 5S+ 0 0 76 -3,-0.3 3,-0.7 1,-0.3 -18,-0.2 0.745 99.7 60.6 -73.8 -24.1 -5.1 17.0 -7.8 22 156 A R G 3 5S+ 0 0 205 -4,-0.4 -1,-0.3 1,-0.2 -2,-0.1 0.104 109.6 42.4 -90.3 22.3 -3.4 15.1 -10.6 23 157 A H G < 5S- 0 0 67 -3,-1.0 -1,-0.2 2,-0.2 -2,-0.2 0.106 115.5-102.2-152.8 23.6 -6.3 12.6 -10.8 24 158 A R T < 5S+ 0 0 137 -3,-0.7 -19,-1.2 1,-0.2 2,-0.3 0.924 84.9 119.6 50.1 51.7 -9.4 14.7 -10.5 25 159 A V < - 0 0 0 -5,-2.1 -2,-0.2 -21,-0.2 -1,-0.2 -0.998 57.7-129.2-147.5 141.8 -9.9 13.7 -6.9 26 160 A C >> - 0 0 11 -2,-0.3 4,-2.1 -17,-0.1 3,-0.5 -0.370 30.1-108.8 -85.7 167.5 -10.0 15.6 -3.6 27 161 A L H 3> S+ 0 0 97 1,-0.2 4,-2.3 2,-0.2 5,-0.3 0.886 117.1 62.2 -62.2 -40.4 -8.0 14.9 -0.5 28 162 A R H 3> S+ 0 0 192 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.845 109.5 42.0 -54.7 -35.1 -11.2 13.7 1.3 29 163 A C H <> S+ 0 0 5 -3,-0.5 4,-1.0 2,-0.2 15,-0.2 0.887 110.2 55.1 -79.4 -41.4 -11.4 10.9 -1.3 30 164 A A H < S+ 0 0 12 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.810 120.2 34.2 -60.9 -29.8 -7.7 10.2 -1.3 31 165 A T H < S+ 0 0 96 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.756 106.3 68.1 -94.6 -31.3 -7.9 9.6 2.4 32 166 A A H < S- 0 0 44 -4,-1.7 2,-2.7 -5,-0.3 -2,-0.2 0.695 85.9-155.7 -61.7 -18.5 -11.5 8.2 2.4 33 167 A S S < S+ 0 0 49 -4,-1.0 11,-1.4 -5,-0.0 2,-0.3 -0.353 70.0 41.4 75.1 -62.6 -9.9 5.2 0.7 34 168 A F E -B 43 0B 111 -2,-2.7 2,-0.4 9,-0.2 9,-0.2 -0.894 68.8-161.8-119.3 149.0 -13.3 4.2 -0.9 35 169 A V E -B 42 0B 10 7,-1.6 2,-3.0 -2,-0.3 7,-1.8 -0.987 30.0-118.5-132.1 139.6 -16.0 6.4 -2.5 36 170 A V E +B 41 0B 86 -2,-0.4 3,-0.3 5,-0.2 5,-0.2 -0.348 51.9 173.5 -73.0 64.7 -19.7 5.6 -3.2 37 171 A L E > -B 40 0B 29 -2,-3.0 3,-1.2 3,-0.8 2,-0.9 0.188 54.8 -33.0 -59.6-172.0 -19.2 6.1 -6.9 38 172 A D T 3 S- 0 0 130 1,-0.3 -1,-0.2 3,-0.0 3,-0.0 -0.255 121.7 -45.7 -50.8 92.7 -21.9 5.4 -9.5 39 173 A G T 3 S+ 0 0 74 -2,-0.9 -1,-0.3 -3,-0.3 2,-0.3 0.779 131.0 87.0 47.5 29.9 -23.6 2.5 -7.7 40 174 A E E < S-B 37 0B 85 -3,-1.2 -3,-0.8 -5,-0.1 2,-0.6 -0.931 77.3-126.1-160.1 132.6 -20.0 1.1 -7.1 41 175 A N E -B 36 0B 66 -2,-0.3 13,-2.0 -5,-0.2 2,-0.3 -0.704 30.6-161.9 -83.6 116.7 -17.4 1.6 -4.5 42 176 A K E -BC 35 53B 33 -7,-1.8 -7,-1.6 -2,-0.6 2,-0.5 -0.736 5.7-148.4-100.5 148.6 -14.1 2.7 -6.1 43 177 A R E -BC 34 52B 54 9,-2.4 9,-1.1 -2,-0.3 2,-0.7 -0.967 23.3-117.1-120.5 125.8 -10.6 2.5 -4.4 44 178 A Y E - C 0 51B 7 -11,-1.4 2,-0.8 -2,-0.5 7,-0.2 -0.435 29.8-146.0 -61.9 105.2 -7.8 4.9 -5.2 45 179 A C >> - 0 0 0 5,-1.7 4,-3.7 -2,-0.7 3,-0.7 -0.656 10.7-164.3 -78.9 109.9 -5.1 2.7 -6.7 46 180 A Q T 34 S+ 0 0 139 -2,-0.8 -1,-0.2 16,-0.6 17,-0.1 0.618 86.8 64.6 -68.3 -12.0 -1.8 4.1 -5.7 47 181 A Q T 34 S+ 0 0 96 15,-0.2 -1,-0.2 3,-0.1 16,-0.1 0.840 124.2 10.7 -79.7 -35.5 -0.2 2.0 -8.4 48 182 A C T <4 S- 0 0 48 -3,-0.7 -2,-0.2 2,-0.2 2,-0.2 0.605 91.4-134.3-115.2 -23.2 -1.9 3.8 -11.3 49 183 A G S < S+ 0 0 5 -4,-3.7 -3,-0.1 1,-0.3 -2,-0.0 -0.165 73.4 99.3 94.9 -41.0 -3.4 6.8 -9.5 50 184 A K S S- 0 0 108 -2,-0.2 -5,-1.7 1,-0.1 -1,-0.3 0.022 84.4 -82.1 -68.5-177.9 -6.8 6.5 -11.1 51 185 A F E -C 44 0B 37 -7,-0.2 2,-0.3 -3,-0.1 -7,-0.2 -0.614 46.4-175.3 -90.9 150.3 -9.8 4.9 -9.5 52 186 A H E -C 43 0B 32 -9,-1.1 -9,-2.4 -2,-0.2 2,-0.4 -0.856 32.5 -85.2-137.2 171.8 -10.5 1.1 -9.5 53 187 A L E > -C 42 0B 54 -2,-0.3 3,-0.6 -11,-0.2 -11,-0.2 -0.648 24.8-147.3 -83.7 133.7 -13.1 -1.4 -8.4 54 188 A L G > S+ 0 0 66 -13,-2.0 3,-0.7 -2,-0.4 -1,-0.1 0.885 98.1 56.8 -66.4 -40.6 -13.1 -2.5 -4.8 55 189 A P G 3 S+ 0 0 97 0, 0.0 -1,-0.2 0, 0.0 -13,-0.1 0.669 98.1 66.0 -66.2 -14.4 -14.4 -6.0 -5.6 56 190 A D G < S+ 0 0 78 -3,-0.6 9,-0.5 2,-0.0 2,-0.3 -0.225 85.4 102.3-100.6 42.8 -11.4 -6.4 -7.9 57 191 A F B < -D 64 0C 34 -3,-0.7 2,-0.2 7,-0.1 7,-0.1 -0.842 48.1-166.3-123.8 161.1 -8.8 -6.3 -5.1 58 192 A D - 0 0 96 5,-0.5 5,-0.1 3,-0.3 -2,-0.0 -0.713 40.9 -93.1-133.7-175.7 -6.7 -8.9 -3.3 59 193 A E S S+ 0 0 171 -2,-0.2 2,-1.3 1,-0.1 -1,-0.0 0.819 97.8 94.3 -71.9 -31.5 -4.5 -9.2 -0.2 60 194 A G S > S- 0 0 47 2,-0.0 3,-0.6 3,-0.0 -2,-0.3 -0.479 107.1 -52.1 -67.0 95.5 -1.4 -8.4 -2.2 61 195 A K T 3 S- 0 0 142 -2,-1.3 2,-0.5 1,-0.2 -3,-0.3 0.127 75.9 -75.1 60.3 176.5 -1.1 -4.6 -1.6 62 196 A R T 3 S+ 0 0 122 -5,-0.1 -16,-0.6 -18,-0.0 2,-0.3 -0.488 97.0 90.7-107.5 60.7 -4.0 -2.2 -2.2 63 197 A S S < S- 0 0 13 -3,-0.6 -5,-0.5 -2,-0.5 -19,-0.0 -0.890 82.9 -64.4-144.1 173.3 -3.9 -2.1 -6.0 64 198 A C B -D 57 0C 17 -2,-0.3 -7,-0.1 1,-0.1 -1,-0.1 -0.108 36.1-133.8 -57.6 158.9 -5.4 -3.8 -9.1 65 199 A R S S+ 0 0 150 -9,-0.5 2,-0.4 2,-0.0 3,-0.2 -0.088 72.0 104.2-107.1 32.6 -4.6 -7.4 -9.7 66 200 A R S S- 0 0 185 1,-0.2 -2,-0.1 2,-0.1 0, 0.0 -0.957 90.1 -3.9-119.4 132.2 -3.8 -6.9 -13.4 67 201 A K S S+ 0 0 133 -2,-0.4 -1,-0.2 2,-0.1 3,-0.1 0.837 86.4 135.2 59.6 33.6 -0.3 -6.9 -14.9 68 202 A L + 0 0 85 -3,-0.2 2,-0.3 1,-0.2 -1,-0.1 0.801 68.2 29.6 -80.7 -31.2 1.2 -7.2 -11.4 69 203 A E + 0 0 136 1,-0.1 -1,-0.2 -4,-0.1 -2,-0.1 -0.972 61.2 120.1-132.4 146.3 3.7 -9.8 -12.4 70 204 A R + 0 0 189 -2,-0.3 2,-1.3 -3,-0.1 3,-0.3 0.209 66.2 66.1-165.6 -48.2 5.5 -10.6 -15.7 71 205 A H S S+ 0 0 157 1,-0.2 0, 0.0 2,-0.1 0, 0.0 -0.656 81.3 80.5 -94.2 80.4 9.3 -10.3 -15.2 72 206 A N S S+ 0 0 110 -2,-1.3 -1,-0.2 -3,-0.1 -3,-0.0 0.433 92.9 32.8-142.7 -58.1 9.9 -13.3 -12.9 73 207 A N S S+ 0 0 159 -3,-0.3 2,-1.3 2,-0.0 -2,-0.1 -0.056 78.2 141.3 -99.3 31.1 10.1 -16.6 -14.6 74 208 A R + 0 0 188 2,-0.1 2,-0.3 0, 0.0 -3,-0.0 -0.621 27.4 130.9 -78.3 96.2 11.6 -15.1 -17.8 75 209 A R - 0 0 210 -2,-1.3 2,-0.5 2,-0.0 -2,-0.0 -0.960 51.9-134.8-144.6 160.6 14.1 -17.7 -18.9 76 210 A K + 0 0 160 -2,-0.3 2,-0.2 2,-0.0 -2,-0.1 -0.877 29.6 176.0-123.2 99.0 15.1 -19.7 -22.0 77 211 A R - 0 0 194 -2,-0.5 -2,-0.0 2,-0.0 0, 0.0 -0.648 14.4-166.8-100.5 158.5 15.6 -23.4 -21.5 78 212 A K + 0 0 128 -2,-0.2 -2,-0.0 2,-0.1 0, 0.0 -0.720 12.9 173.6-147.9 91.6 16.4 -26.1 -24.1 79 213 A P S S+ 0 0 128 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.714 88.2 33.8 -70.6 -20.2 16.1 -29.8 -23.0 80 214 A V + 0 0 89 2,-0.0 -2,-0.1 0, 0.0 0, 0.0 0.869 66.4 169.1 -96.8 -75.4 16.8 -30.8 -26.6 81 215 A D S S+ 0 0 126 1,-0.1 -3,-0.1 0, 0.0 0, 0.0 0.972 71.7 54.5 57.0 59.4 19.2 -28.4 -28.3 82 216 A K S S- 0 0 176 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.121 87.0-145.2 178.6 -38.5 19.8 -30.6 -31.4 83 217 A G - 0 0 44 2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.017 38.4 -47.5 76.6 173.8 16.5 -31.4 -33.0 84 218 A G - 0 0 82 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.070 41.2-178.6 -68.4-174.3 15.5 -34.6 -34.8 85 219 A V 0 0 149 1,-0.5 -1,-0.1 0, 0.0 -2,-0.0 0.356 360.0 360.0-153.4 -45.7 17.5 -36.5 -37.4 86 220 A A 0 0 162 0, 0.0 -1,-0.5 0, 0.0 0, 0.0 -0.891 360.0 360.0-112.2 360.0 15.7 -39.5 -38.6