==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER FOUR HELIX BUNDLE 15-SEP-03 1UO4 . COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.K.YADAV,J.E.REDMAN,J.M.ALVAREZ-GUTIERREZ,Y.ZHANG, . 62 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5186.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 87.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 52 83.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A M > 0 0 148 0, 0.0 4,-1.5 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 143.1 76.2 27.7 -10.9 2 3 A K H > + 0 0 155 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.808 360.0 64.0 -76.2 -27.7 76.8 26.1 -7.4 3 4 A Q H > S+ 0 0 85 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.947 107.2 43.6 -57.6 -43.9 76.1 29.5 -5.7 4 5 A I H > S+ 0 0 66 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.892 113.0 51.2 -67.3 -43.9 72.5 29.2 -7.1 5 6 A E H X S+ 0 0 133 -4,-1.5 4,-2.0 1,-0.2 -2,-0.2 0.951 110.0 50.2 -58.4 -46.4 72.3 25.5 -6.1 6 7 A D H X S+ 0 0 86 -4,-2.9 4,-1.9 1,-0.2 -1,-0.2 0.824 108.1 52.7 -63.4 -37.9 73.4 26.4 -2.6 7 8 A K H X S+ 0 0 70 -4,-1.7 4,-2.7 -5,-0.2 -1,-0.2 0.931 105.8 54.4 -64.8 -38.1 70.7 29.1 -2.4 8 9 A G H X S+ 0 0 37 -4,-2.3 4,-2.6 1,-0.2 -2,-0.2 0.899 107.2 51.3 -54.2 -47.1 68.1 26.6 -3.4 9 10 A E H X S+ 0 0 123 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.900 109.7 48.6 -58.0 -47.1 69.2 24.4 -0.6 10 11 A E H X S+ 0 0 63 -4,-1.9 4,-2.0 2,-0.2 -2,-0.2 0.931 110.7 51.4 -62.7 -42.6 68.9 27.3 1.9 11 12 A I H X S+ 0 0 37 -4,-2.7 4,-2.0 1,-0.2 -2,-0.2 0.937 108.7 50.6 -57.4 -48.6 65.5 28.1 0.7 12 13 A L H X S+ 0 0 92 -4,-2.6 4,-2.1 1,-0.2 -1,-0.2 0.892 105.7 57.0 -55.1 -44.0 64.3 24.6 1.0 13 14 A S H X S+ 0 0 74 -4,-1.9 4,-1.9 2,-0.2 -1,-0.2 0.916 105.2 50.2 -58.0 -38.6 65.6 24.5 4.5 14 15 A K H X S+ 0 0 37 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.916 107.0 55.3 -63.9 -35.8 63.5 27.5 5.4 15 16 A L H X S+ 0 0 75 -4,-2.0 4,-2.3 1,-0.2 -2,-0.2 0.910 106.4 50.8 -65.4 -38.0 60.4 25.8 4.0 16 17 A Y H X S+ 0 0 135 -4,-2.1 4,-2.0 2,-0.2 -1,-0.2 0.915 108.8 51.4 -64.6 -40.6 61.0 22.8 6.2 17 18 A H H X S+ 0 0 78 -4,-1.9 4,-2.1 2,-0.2 -2,-0.2 0.936 109.2 50.6 -56.7 -46.1 61.2 25.1 9.2 18 19 A I H X S+ 0 0 17 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.900 107.8 53.5 -57.3 -43.4 57.9 26.7 8.1 19 20 A E H X S+ 0 0 118 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.872 107.5 51.1 -62.5 -38.2 56.4 23.2 7.9 20 21 A N H X S+ 0 0 85 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.895 109.3 50.5 -66.2 -36.9 57.5 22.5 11.4 21 22 A E H X S+ 0 0 6 -4,-2.1 4,-2.3 1,-0.2 -2,-0.2 0.908 110.9 48.5 -60.1 -45.9 55.9 25.7 12.6 22 23 A L H X S+ 0 0 71 -4,-2.2 4,-3.0 2,-0.2 -1,-0.2 0.894 105.2 58.1 -63.3 -40.7 52.7 24.8 10.9 23 24 A A H X S+ 0 0 33 -4,-2.0 4,-1.7 2,-0.2 -1,-0.2 0.933 110.6 45.3 -56.5 -46.9 52.7 21.2 12.4 24 25 A R H X S+ 0 0 102 -4,-1.9 4,-2.4 1,-0.2 -2,-0.2 0.927 112.6 49.1 -61.4 -41.5 52.8 23.0 15.8 25 26 A I H X S+ 0 0 13 -4,-2.3 4,-1.7 2,-0.2 6,-0.2 0.901 106.4 56.1 -70.8 -37.2 50.1 25.5 15.0 26 27 A K H <>S+ 0 0 109 -4,-3.0 5,-2.6 1,-0.2 -1,-0.2 0.893 110.5 46.2 -62.1 -39.0 47.8 22.7 13.6 27 28 A K H ><5S+ 0 0 165 -4,-1.7 3,-2.0 3,-0.2 -2,-0.2 0.914 108.2 54.5 -70.7 -42.9 48.0 20.9 17.0 28 29 A L H 3<5S+ 0 0 80 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.857 111.2 47.9 -54.8 -31.1 47.4 24.1 19.0 29 30 A L T 3<5S- 0 0 92 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.146 116.8-117.7 -96.8 14.4 44.2 24.5 16.9 30 31 A G T < 5 0 0 65 -3,-2.0 -3,-0.2 1,-0.2 -2,-0.1 0.640 360.0 360.0 55.9 13.0 43.3 20.9 17.5 31 32 A E < 0 0 167 -5,-2.6 -4,-0.2 -6,-0.2 -1,-0.2 0.532 360.0 360.0 -60.3 360.0 43.5 19.9 13.9 32 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 33 2 B M > 0 0 88 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -33.4 73.5 36.4 -11.9 34 3 B K H > + 0 0 146 1,-0.2 4,-1.6 2,-0.2 5,-0.1 0.911 360.0 46.5 -59.9 -37.6 73.2 39.8 -10.1 35 4 B Q H > S+ 0 0 123 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.876 109.4 51.2 -69.0 -44.4 69.4 39.7 -10.9 36 5 B I H > S+ 0 0 88 2,-0.2 4,-3.5 1,-0.2 -2,-0.2 0.897 109.7 54.4 -56.5 -39.6 69.1 36.1 -9.7 37 6 B E H X S+ 0 0 55 -4,-2.3 4,-2.2 1,-0.3 -2,-0.2 0.861 105.9 49.5 -64.9 -38.9 70.9 37.4 -6.5 38 7 B D H X S+ 0 0 48 -4,-1.6 4,-1.9 2,-0.2 -1,-0.3 0.864 112.1 48.1 -67.7 -42.7 68.4 40.1 -6.0 39 8 B K H X S+ 0 0 110 -4,-2.1 4,-2.7 2,-0.2 5,-0.2 0.950 110.3 53.2 -63.4 -41.2 65.5 37.5 -6.4 40 9 B G H X S+ 0 0 11 -4,-3.5 4,-2.3 1,-0.2 -2,-0.2 0.906 111.3 46.5 -55.3 -45.2 67.4 35.2 -3.9 41 10 B E H X S+ 0 0 125 -4,-2.2 4,-2.2 2,-0.2 -1,-0.2 0.886 112.0 49.0 -63.7 -40.1 67.5 38.1 -1.4 42 11 B E H X S+ 0 0 100 -4,-1.9 4,-1.9 2,-0.2 -2,-0.2 0.882 112.2 49.8 -69.4 -42.8 63.8 39.0 -1.9 43 12 B I H X S+ 0 0 74 -4,-2.7 4,-2.4 2,-0.2 -2,-0.2 0.927 111.3 46.6 -61.5 -48.4 62.8 35.4 -1.4 44 13 B L H X S+ 0 0 16 -4,-2.3 4,-2.5 -5,-0.2 5,-0.2 0.930 110.3 56.1 -62.7 -36.4 64.8 34.9 1.8 45 14 B S H X S+ 0 0 77 -4,-2.2 4,-1.9 1,-0.2 -1,-0.2 0.901 110.1 44.4 -56.2 -47.9 63.4 38.2 3.0 46 15 B K H X S+ 0 0 130 -4,-1.9 4,-2.5 1,-0.2 -1,-0.2 0.893 110.6 53.9 -69.2 -37.3 60.0 36.9 2.5 47 16 B L H X S+ 0 0 14 -4,-2.4 4,-2.7 2,-0.2 -2,-0.2 0.896 108.2 49.0 -62.7 -46.2 60.7 33.5 4.1 48 17 B Y H X S+ 0 0 106 -4,-2.5 4,-2.4 2,-0.2 5,-0.2 0.924 111.2 52.3 -57.3 -41.6 62.1 35.1 7.3 49 18 B H H X S+ 0 0 98 -4,-1.9 4,-2.5 -5,-0.2 -2,-0.2 0.938 110.9 45.4 -57.1 -51.5 58.9 37.3 7.4 50 19 B I H X S+ 0 0 67 -4,-2.5 4,-2.4 2,-0.2 5,-0.2 0.910 111.6 52.4 -58.2 -46.8 56.7 34.2 7.0 51 20 B E H X S+ 0 0 23 -4,-2.7 4,-1.9 -5,-0.2 -1,-0.2 0.903 112.6 46.0 -55.3 -45.6 58.7 32.3 9.7 52 21 B N H X S+ 0 0 104 -4,-2.4 4,-2.3 2,-0.2 -2,-0.2 0.907 110.5 52.0 -68.9 -38.6 58.3 35.2 12.1 53 22 B E H X S+ 0 0 93 -4,-2.5 4,-2.0 -5,-0.2 -2,-0.2 0.921 112.3 46.2 -61.7 -38.8 54.6 35.7 11.4 54 23 B L H X S+ 0 0 23 -4,-2.4 4,-2.8 2,-0.2 -2,-0.2 0.863 110.3 54.2 -71.6 -32.4 54.0 31.9 12.1 55 24 B A H X S+ 0 0 41 -4,-1.9 4,-2.1 -5,-0.2 -1,-0.2 0.886 108.4 48.7 -69.9 -38.5 56.2 32.2 15.2 56 25 B R H X S+ 0 0 157 -4,-2.3 4,-2.7 2,-0.2 -2,-0.2 0.901 112.4 49.5 -66.0 -45.2 54.0 35.1 16.5 57 26 B I H X S+ 0 0 76 -4,-2.0 4,-3.0 1,-0.2 -2,-0.2 0.948 111.0 47.5 -59.8 -46.6 50.9 33.0 15.7 58 27 B K H X S+ 0 0 86 -4,-2.8 4,-2.5 2,-0.2 -2,-0.2 0.898 113.4 50.1 -58.5 -42.1 52.2 29.9 17.5 59 28 B K H X S+ 0 0 128 -4,-2.1 4,-1.4 2,-0.2 -2,-0.2 0.926 113.3 45.4 -62.7 -48.3 53.2 32.2 20.6 60 29 B L H < S+ 0 0 79 -4,-2.7 -2,-0.2 2,-0.2 -1,-0.2 0.909 113.1 49.1 -63.7 -44.2 49.7 33.8 20.6 61 30 B L H < S+ 0 0 67 -4,-3.0 -2,-0.2 2,-0.3 -1,-0.2 0.907 107.3 55.7 -63.2 -42.8 47.9 30.4 20.3 62 31 B G H < 0 0 58 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.744 360.0 360.0 -63.7 -27.7 50.0 28.9 23.2 63 32 B E < 0 0 158 -4,-1.4 -1,-0.3 -5,-0.2 -2,-0.3 0.684 360.0 360.0 -79.1 360.0 48.8 31.7 25.2