==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER EXUDATE PROTEIN 26-SEP-03 1UOY . COMPND 2 MOLECULE: BUBBLE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: PENICILLIUM BREVICOMPACTUM; . AUTHOR J.G.OLSEN,C.FLENSBURG,O.OLSEN,M.SEIBOLD,G.BRICOGNE, . 64 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3665.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 59.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 28.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 109 0, 0.0 12,-2.4 0, 0.0 15,-0.2 0.000 360.0 360.0 360.0 154.3 -2.8 14.7 2.0 2 2 A T - 0 0 90 10,-0.2 10,-0.2 1,-0.1 7,-0.1 -0.392 360.0-107.6 -79.1 175.4 -2.6 18.5 1.6 3 3 A a - 0 0 9 8,-0.4 2,-0.2 5,-0.3 9,-0.1 0.686 54.4-127.0 -84.1 -14.9 -0.8 20.2 4.4 4 4 A G > + 0 0 40 4,-0.1 3,-1.9 3,-0.1 -1,-0.3 -0.591 55.7 0.6 104.1-173.0 -3.8 21.8 6.0 5 5 A S T 3 S+ 0 0 130 1,-0.3 3,-0.1 -2,-0.2 0, 0.0 -0.320 125.8 24.7 -58.7 134.4 -4.9 25.2 7.1 6 6 A G T 3 S+ 0 0 81 1,-0.4 -1,-0.3 -2,-0.0 2,-0.2 0.363 102.2 103.7 94.1 -10.8 -2.3 27.9 6.4 7 7 A Y < - 0 0 111 -3,-1.9 -1,-0.4 1,-0.1 2,-0.1 -0.695 67.1-112.6-105.9 164.5 -0.7 26.0 3.6 8 8 A N > - 0 0 88 -2,-0.2 3,-2.0 22,-0.1 -5,-0.3 -0.457 23.4-106.9-101.2 165.3 -0.9 26.5 -0.2 9 9 A V T 3 S+ 0 0 88 1,-0.3 48,-0.1 -2,-0.1 -1,-0.1 0.562 115.6 60.9 -65.3 -14.5 -2.4 24.6 -3.1 10 10 A D T 3 S+ 0 0 4 46,-0.2 18,-2.7 49,-0.1 2,-0.3 0.267 91.7 93.6 -94.0 14.1 1.1 23.7 -4.3 11 11 A Q B < +a 28 0A 7 -3,-2.0 -8,-0.4 16,-0.2 2,-0.3 -0.835 44.8 175.9-115.9 143.8 1.9 21.8 -1.1 12 12 A R - 0 0 44 16,-2.6 2,-0.6 -2,-0.3 18,-0.4 -0.975 38.8-104.7-138.4 147.4 1.5 18.1 -0.1 13 13 A R > - 0 0 104 -12,-2.4 3,-2.3 -2,-0.3 30,-0.4 -0.637 38.5-116.9 -82.3 119.4 2.5 16.5 3.1 14 14 A T T 3 S+ 0 0 43 -2,-0.6 30,-0.2 1,-0.3 3,-0.1 -0.243 97.0 11.2 -54.9 133.9 5.7 14.4 2.7 15 15 A N T 3 S+ 0 0 119 28,-3.2 -1,-0.3 1,-0.3 2,-0.1 0.386 99.1 122.0 76.9 -0.1 5.1 10.7 3.4 16 16 A S S < S- 0 0 16 -3,-2.3 27,-2.7 -15,-0.2 -1,-0.3 -0.415 72.9 -78.7 -83.0 168.1 1.3 11.1 3.4 17 17 A G B -B 42 0A 27 25,-0.2 2,-0.3 -2,-0.1 25,-0.3 -0.278 46.8-171.1 -67.8 155.4 -0.9 9.1 1.1 18 18 A b - 0 0 23 23,-1.6 2,-0.1 -3,-0.1 23,-0.0 -0.991 23.9-112.9-152.3 138.6 -1.4 10.1 -2.6 19 19 A K > - 0 0 171 -2,-0.3 3,-1.9 1,-0.1 4,-0.2 -0.368 25.5-124.3 -69.8 145.2 -3.6 8.9 -5.4 20 20 A A G > S+ 0 0 96 1,-0.3 3,-2.2 2,-0.2 -1,-0.1 0.809 104.4 72.4 -62.6 -29.6 -2.1 7.2 -8.3 21 21 A G G 3 S+ 0 0 67 1,-0.3 -1,-0.3 3,-0.0 3,-0.1 0.602 75.2 82.9 -61.1 -13.8 -3.5 9.7 -10.8 22 22 A N G X S+ 0 0 28 -3,-1.9 3,-2.0 1,-0.2 -1,-0.3 0.793 73.8 178.9 -60.5 -24.0 -1.0 12.2 -9.5 23 23 A G T < - 0 0 42 -3,-2.2 15,-0.5 1,-0.2 -1,-0.2 -0.311 62.0 -26.7 56.3-139.5 1.4 10.6 -11.9 24 24 A D T 3 S+ 0 0 124 -3,-0.1 -1,-0.2 13,-0.1 -2,-0.1 0.135 91.0 145.5 -98.3 24.2 4.8 12.3 -11.8 25 25 A R < - 0 0 102 -3,-2.0 13,-0.6 35,-0.1 2,-0.5 -0.285 41.7-138.8 -58.3 143.3 3.5 15.7 -10.7 26 26 A H E + C 0 37A 62 11,-0.1 36,-2.3 33,-0.1 31,-0.3 -0.907 26.4 171.7-110.3 128.6 5.9 17.5 -8.4 27 27 A F E - C 0 36A 2 9,-2.5 9,-2.9 -2,-0.5 2,-0.3 -0.703 32.7-103.1-121.8 173.1 4.6 19.4 -5.4 28 28 A c E -aC 11 35A 0 -18,-2.7 -16,-2.6 7,-0.2 7,-0.2 -0.810 31.3-120.4 -99.0 144.9 6.3 21.1 -2.4 29 29 A G > - 0 0 0 5,-2.5 3,-1.2 -2,-0.3 -16,-0.2 -0.220 39.3 -94.8 -70.4 172.0 6.4 19.7 1.0 30 30 A a T 3 S+ 0 0 17 -18,-0.4 -22,-0.1 1,-0.3 -17,-0.1 0.875 126.0 41.4 -60.8 -39.7 4.8 21.6 3.9 31 31 A D T 3 S- 0 0 101 1,-0.0 -1,-0.3 20,-0.0 23,-0.1 0.438 106.3-126.3 -90.2 8.9 8.0 23.3 5.0 32 32 A R S < S+ 0 0 56 -3,-1.2 22,-2.7 2,-0.2 21,-0.2 0.535 78.6 117.7 58.7 16.2 9.1 23.9 1.4 33 33 A T S S+ 0 0 33 19,-0.3 16,-2.1 20,-0.2 17,-1.2 0.501 74.5 33.0 -89.8 1.8 12.4 22.2 2.0 34 34 A G E - D 0 48A 1 14,-0.3 -5,-2.5 15,-0.2 2,-0.4 -0.995 68.9-127.6-155.3 155.2 11.7 19.5 -0.5 35 35 A V E -CD 28 47A 2 12,-2.2 11,-3.0 -2,-0.3 12,-1.3 -0.874 34.3-159.8 -95.9 132.2 10.0 18.7 -3.8 36 36 A V E -CD 27 45A 0 -9,-2.9 -9,-2.5 -2,-0.4 2,-0.3 -0.883 12.4-171.7-119.7 155.3 7.7 15.6 -3.5 37 37 A E E -CD 26 44A 31 7,-2.3 7,-2.9 -2,-0.3 2,-0.8 -0.973 36.3-103.4-138.6 148.5 6.3 13.1 -6.0 38 38 A b E + D 0 43A 18 -13,-0.6 2,-0.4 -15,-0.5 5,-0.2 -0.645 52.7 160.7 -79.2 110.1 3.7 10.4 -5.6 39 39 A K E > - D 0 42A 95 3,-2.5 3,-1.7 -2,-0.8 -2,-0.1 -0.997 65.3 -7.3-133.3 128.4 5.6 7.1 -5.5 40 40 A G T 3 S- 0 0 85 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.853 129.0 -56.7 57.0 32.9 4.3 3.9 -4.1 41 41 A G T 3 S+ 0 0 35 1,-0.2 -23,-1.6 -24,-0.1 2,-0.4 0.527 119.6 92.0 78.7 7.0 1.3 5.6 -2.8 42 42 A K E < S-BD 17 39A 110 -3,-1.7 -3,-2.5 -25,-0.3 2,-0.6 -0.983 84.2-106.5-134.0 145.0 3.1 8.2 -0.7 43 43 A W E - D 0 38A 3 -27,-2.7 -28,-3.2 -30,-0.4 2,-0.4 -0.582 48.4-168.1 -66.0 118.6 4.4 11.7 -1.3 44 44 A T E - D 0 37A 46 -7,-2.9 -7,-2.3 -2,-0.6 2,-0.3 -0.923 24.1-115.2-120.8 132.5 8.1 11.0 -1.5 45 45 A E E + D 0 36A 81 -2,-0.4 -9,-0.3 -9,-0.2 3,-0.1 -0.516 33.6 172.5 -70.9 122.4 10.8 13.6 -1.5 46 46 A V E + 0 0 60 -11,-3.0 2,-0.3 -2,-0.3 -10,-0.2 0.505 69.9 24.3-105.8 -11.7 12.6 13.7 -4.8 47 47 A Q E - D 0 35A 104 -12,-1.3 -12,-2.2 16,-0.0 2,-0.8 -0.956 68.3-142.0-153.6 132.4 14.8 16.7 -4.2 48 48 A D E - D 0 34A 108 -2,-0.3 -14,-0.3 -14,-0.2 3,-0.1 -0.876 10.9-171.6 -94.7 110.9 16.0 18.2 -1.0 49 49 A d - 0 0 21 -16,-2.1 2,-1.9 -2,-0.8 -15,-0.2 0.691 20.7-152.2 -72.3 -18.7 16.0 22.0 -1.3 50 50 A G S S+ 0 0 52 -17,-1.2 -1,-0.2 -3,-0.1 2,-0.1 -0.592 75.3 50.3 81.9 -79.7 17.8 22.3 2.0 51 51 A S S S- 0 0 79 -2,-1.9 2,-2.0 -3,-0.1 3,-0.3 -0.343 109.5 -90.8 -81.8 170.3 16.3 25.7 2.7 52 52 A S S S+ 0 0 83 1,-0.2 -19,-0.3 -2,-0.1 -1,-0.1 -0.294 84.7 121.3 -80.1 52.5 12.5 26.4 2.5 53 53 A S + 0 0 44 -2,-2.0 -1,-0.2 -21,-0.2 -20,-0.2 0.469 27.1 126.1 -99.7 -4.1 12.6 27.5 -1.1 54 54 A c + 0 0 2 -22,-2.7 2,-0.3 -3,-0.3 10,-0.2 -0.237 29.6 173.2 -60.2 141.8 10.3 25.2 -3.0 55 55 A K E +E 63 0B 114 8,-2.4 8,-2.4 6,-0.1 2,-0.2 -0.991 9.6 136.4-145.5 146.8 7.6 26.7 -5.2 56 56 A G E - 0 0 23 -2,-0.3 2,-0.3 6,-0.3 5,-0.2 -0.782 40.8 -91.5-158.7-155.5 5.1 25.2 -7.6 57 57 A T E > -E 60 0B 73 3,-1.7 3,-1.9 -31,-0.3 5,-0.2 -0.812 38.7 -96.9-130.7 173.2 1.5 25.3 -8.7 58 58 A S T 3 S+ 0 0 62 1,-0.3 3,-0.1 -2,-0.3 -31,-0.0 0.670 126.0 48.3 -65.3 -12.8 -1.8 23.6 -7.9 59 59 A N T 3 S- 0 0 117 1,-0.4 2,-0.3 -33,-0.0 -1,-0.3 0.303 121.2-102.1-109.1 8.4 -1.2 21.4 -10.9 60 60 A G E < +E 57 0B 3 -3,-1.9 -3,-1.7 -35,-0.1 -1,-0.4 -0.797 69.7 134.9 106.4-154.0 2.4 20.5 -10.0 61 61 A G E + 0 0 60 -2,-0.3 -34,-0.2 1,-0.2 -6,-0.1 0.645 37.4 168.5 80.2 13.2 5.6 21.9 -11.5 62 62 A A E + 0 0 5 -36,-2.3 2,-0.3 -5,-0.2 -6,-0.3 -0.330 5.8 170.6 -64.4 143.7 7.4 22.4 -8.2 63 63 A T E E 55 0B 75 -8,-2.4 -8,-2.4 -10,-0.1 -29,-0.1 -0.938 360.0 360.0-141.2 161.3 11.1 23.2 -8.2 64 64 A d 0 0 39 -2,-0.3 -8,-0.1 -10,-0.2 -13,-0.1 0.549 360.0 360.0 -72.2 360.0 13.5 24.3 -5.5