==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA/PEPTIDE 05-DEC-11 3UXW . COMPND 2 MOLECULE: DODECAMER DNA; . SOURCE 2 SYNTHETIC: YES; . AUTHOR E.FONFRIA-SUBIROS,F.J.ACOSTA-REYES,N.SAPERAS,J.POUS,J.A.SUBI . 34 4 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6040.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 33 K R 0 0 298 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 127.8 29.3 39.0 17.3 2 34 K K - 0 0 171 1,-0.1 3,-0.1 5,-0.0 0, 0.0 -0.818 360.0-114.1-100.5 152.9 28.9 35.5 15.9 3 35 K P - 0 0 119 0, 0.0 2,-0.1 0, 0.0 -1,-0.1 -0.075 46.4 -73.1 -71.8-174.8 31.2 34.3 13.1 4 36 K R S S+ 0 0 237 2,-0.0 2,-0.0 3,-0.0 0, 0.0 -0.464 89.9 29.6 -78.9 149.9 30.0 33.4 9.6 5 37 K G S S- 0 0 65 -2,-0.1 -3,-0.0 -3,-0.1 0, 0.0 -0.081 98.9 -30.9 96.5 170.0 28.0 30.3 8.9 6 38 K R - 0 0 218 1,-0.1 3,-0.1 -2,-0.0 -2,-0.0 -0.402 66.1-116.4 -65.9 132.2 25.6 28.0 10.6 7 39 K P - 0 0 88 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.351 34.5 -99.9 -64.6 147.4 26.1 27.6 14.4 8 40 K K 0 0 208 1,-0.1 0, 0.0 -2,-0.0 0, 0.0 -0.243 360.0 360.0 -58.5 160.2 27.1 24.2 15.8 9 41 K K 0 0 236 -3,-0.1 -1,-0.1 0, 0.0 -3,-0.0 -0.789 360.0 360.0-135.8 360.0 24.3 22.2 17.3 10 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 34 L K 0 0 235 0, 0.0 2,-0.1 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 155.2 52.8 32.4 15.6 12 35 L P - 0 0 120 0, 0.0 2,-0.1 0, 0.0 0, 0.0 -0.346 360.0 -68.7 -89.2-178.7 55.2 31.0 13.0 13 36 L R S S+ 0 0 234 -2,-0.1 2,-0.0 2,-0.0 0, 0.0 -0.327 89.5 16.8 -69.9 147.5 54.3 29.8 9.4 14 37 L G S S- 0 0 64 -3,-0.1 0, 0.0 -2,-0.1 0, 0.0 -0.085 100.3 -23.6 92.5 176.2 52.2 26.7 8.7 15 38 L R - 0 0 220 1,-0.1 3,-0.1 3,-0.0 -2,-0.0 -0.445 68.9-113.7 -66.8 131.7 49.8 24.4 10.6 16 39 L P - 0 0 86 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.345 34.3-102.0 -58.0 142.7 50.2 24.3 14.4 17 40 L K 0 0 206 1,-0.0 0, 0.0 -2,-0.0 0, 0.0 -0.308 360.0 360.0 -58.6 158.2 51.4 21.1 15.9 18 41 L K 0 0 235 -3,-0.1 -1,-0.0 -2,-0.0 -3,-0.0 -0.980 360.0 360.0-134.9 360.0 48.6 19.2 17.5 19 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 20 33 M R 0 0 297 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 160.5 26.7 16.4 35.4 21 34 M K - 0 0 170 1,-0.1 3,-0.1 5,-0.0 0, 0.0 -0.886 360.0 -99.9-114.3 156.4 27.6 19.8 34.1 22 35 M P - 0 0 116 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.254 50.2 -86.4 -64.1 163.6 27.2 21.1 30.6 23 36 M R S S+ 0 0 239 2,-0.0 2,-0.0 3,-0.0 0, 0.0 -0.391 94.9 32.2 -62.4 155.5 30.2 21.2 28.2 24 37 M G S S- 0 0 64 -3,-0.1 3,-0.1 -2,-0.1 -3,-0.0 -0.130 108.1 -33.6 84.2 174.3 32.3 24.3 28.5 25 38 M R S S- 0 0 217 1,-0.1 -2,-0.0 -2,-0.0 0, 0.0 -0.372 72.7-102.4 -67.7 142.5 33.1 26.6 31.4 26 39 M P - 0 0 82 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.325 29.9-118.5 -70.9 145.5 30.3 27.1 33.9 27 40 M K 0 0 202 -3,-0.1 -3,-0.0 1,-0.0 0, 0.0 -0.716 360.0 360.0 -71.1 132.2 28.2 30.2 33.8 28 41 M K 0 0 233 -2,-0.4 -1,-0.0 0, 0.0 0, 0.0 -0.763 360.0 360.0 -96.0 360.0 28.6 32.1 37.0 29 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 30 34 N K 0 0 216 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 174.9 3.7 23.2 34.5 31 35 N P - 0 0 112 0, 0.0 2,-0.0 0, 0.0 0, 0.0 -0.110 360.0 -70.8 -71.9-179.3 3.1 24.2 30.9 32 36 N R S S+ 0 0 231 2,-0.0 0, 0.0 3,-0.0 0, 0.0 -0.332 94.0 17.0 -72.8 157.1 5.9 24.7 28.4 33 37 N G S S- 0 0 65 -3,-0.1 0, 0.0 2,-0.1 0, 0.0 0.023 106.5 -22.9 77.3 177.9 8.3 27.6 28.7 34 38 N R S S- 0 0 219 1,-0.1 -2,-0.0 0, 0.0 2,-0.0 -0.362 74.2-108.3 -63.3 135.2 9.2 30.1 31.5 35 39 N P - 0 0 84 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.365 29.9-116.1 -67.3 142.3 6.4 30.5 34.1 36 40 N K 0 0 210 1,-0.0 0, 0.0 -2,-0.0 0, 0.0 -0.593 360.0 360.0 -70.1 141.6 4.5 33.7 34.1 37 41 N K 0 0 243 -2,-0.3 -1,-0.0 0, 0.0 0, 0.0 -0.756 360.0 360.0 -94.9 360.0 5.0 35.7 37.3