==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 25-NOV-03 1V5L . COMPND 2 MOLECULE: PDZ AND LIM DOMAIN 3; ACTININ ALPHA 2 ASSOCIATED . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6828.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 55.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 20.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 17 16.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 112 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-157.7 -22.9 2.8 -3.4 2 2 A S + 0 0 126 2,-0.0 3,-0.1 3,-0.0 0, 0.0 0.743 360.0 52.0-113.8 -52.1 -25.1 5.2 -1.4 3 3 A S S S- 0 0 136 1,-0.2 2,-0.3 3,-0.0 95,-0.2 0.919 125.3 -47.4 -54.1 -47.6 -23.1 6.2 1.7 4 4 A G - 0 0 35 93,-0.1 2,-1.4 94,-0.1 -1,-0.2 -0.965 67.0 -67.8-170.9-176.6 -20.1 7.3 -0.5 5 5 A S + 0 0 64 -2,-0.3 2,-1.1 80,-0.1 92,-0.2 -0.575 53.7 171.9 -91.3 73.6 -17.8 6.4 -3.3 6 6 A S - 0 0 47 -2,-1.4 2,-1.1 80,-0.0 79,-0.2 -0.712 14.7-164.2 -87.5 97.7 -15.9 3.6 -1.6 7 7 A G B -A 84 0A 2 77,-2.0 77,-2.6 -2,-1.1 2,-0.2 -0.702 8.3-155.8 -86.8 98.4 -13.7 2.0 -4.4 8 8 A N + 0 0 131 -2,-1.1 2,-0.3 75,-0.2 75,-0.2 -0.491 14.4 179.7 -74.4 140.0 -12.6 -1.3 -3.1 9 9 A V - 0 0 12 73,-0.4 73,-2.6 -2,-0.2 2,-0.7 -0.841 8.2-179.7-147.1 105.2 -9.4 -2.7 -4.6 10 10 A V E -D 81 0B 70 -2,-0.3 71,-0.2 71,-0.2 -2,-0.0 -0.874 12.1-165.0-110.0 102.2 -7.9 -6.1 -3.5 11 11 A L E -D 80 0B 0 69,-2.2 69,-1.6 -2,-0.7 2,-0.3 -0.659 26.6-109.9 -88.1 139.3 -4.7 -6.9 -5.3 12 12 A P E +D 79 0B 61 0, 0.0 67,-0.2 0, 0.0 29,-0.1 -0.500 60.7 102.1 -69.7 125.2 -3.3 -10.5 -5.3 13 13 A G S S- 0 0 22 65,-2.4 2,-0.2 -2,-0.3 65,-0.1 -0.352 71.7-152.5-116.0-162.7 -0.1 -10.8 -3.2 14 14 A P S S- 0 0 99 0, 0.0 64,-0.1 0, 0.0 63,-0.1 0.586 87.4 -52.7 -69.8-170.8 2.2 -11.1 -1.7 15 15 A A S S+ 0 0 50 59,-0.2 2,-0.2 -2,-0.2 -2,-0.0 -0.134 98.0 72.2 -67.1 167.0 4.3 -8.2 -3.1 16 16 A P + 0 0 119 0, 0.0 58,-0.0 0, 0.0 0, 0.0 0.576 55.8 177.8 -69.8 166.0 5.4 -6.9 -5.3 17 17 A W - 0 0 20 2,-0.2 25,-0.2 -2,-0.2 24,-0.1 0.833 38.1-121.6-101.1 -49.7 2.0 -5.6 -6.5 18 18 A G S S+ 0 0 22 1,-0.5 19,-1.1 23,-0.1 2,-0.3 0.311 73.2 109.1 121.5 -5.2 2.9 -3.5 -9.5 19 19 A F B -E 36 0C 20 17,-0.2 -1,-0.5 23,-0.1 -2,-0.2 -0.746 53.2-145.2-104.0 151.7 1.5 -0.1 -8.4 20 20 A R - 0 0 150 15,-1.5 2,-0.3 -2,-0.3 -1,-0.0 -0.539 7.4-136.6-107.5 175.1 3.4 3.0 -7.3 21 21 A L - 0 0 31 12,-0.3 2,-0.3 -2,-0.2 12,-0.2 -0.969 15.9-178.1-135.2 150.2 2.8 5.7 -4.8 22 22 A S E +F 32 0D 55 10,-2.2 10,-2.6 -2,-0.3 2,-0.2 -0.994 49.4 6.6-149.7 140.5 3.1 9.5 -4.7 23 23 A G E - 0 0 13 -2,-0.3 8,-0.2 8,-0.2 2,-0.2 -0.628 61.9-151.3 93.0-151.4 2.6 12.2 -2.2 24 24 A G E > -F 29 0D 0 5,-2.2 5,-2.9 -2,-0.2 3,-0.2 -0.630 34.0 -95.1 148.9 152.5 1.8 11.7 1.5 25 25 A I T 5S+ 0 0 61 39,-0.7 3,-0.3 1,-0.2 40,-0.1 0.740 125.1 52.3 -62.2 -22.5 0.1 13.1 4.6 26 26 A D T 5S+ 0 0 75 1,-0.2 -1,-0.2 3,-0.1 -2,-0.1 0.836 106.6 50.0 -81.7 -35.9 3.5 14.6 5.5 27 27 A F T 5S- 0 0 119 2,-0.3 -1,-0.2 -3,-0.2 -2,-0.2 0.293 117.5-112.5 -85.2 10.4 4.1 16.2 2.1 28 28 A N T 5S+ 0 0 153 -3,-0.3 -3,-0.2 1,-0.2 -2,-0.1 0.832 85.0 108.0 62.0 32.8 0.6 17.8 2.4 29 29 A Q E - 0 0 50 -19,-1.1 6,-1.5 -2,-0.4 2,-0.6 -0.439 35.5-126.4 -63.9 117.4 2.0 -2.2 -14.4 38 38 A P T 3 S+ 0 0 99 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.533 87.6 2.7 -69.7 112.8 0.6 -2.7 -17.9 39 39 A G T 3 S+ 0 0 75 -2,-0.6 2,-0.3 1,-0.2 -2,-0.0 0.987 110.7 90.5 75.4 65.0 -1.0 -6.2 -18.1 40 40 A S S <> S- 0 0 36 -3,-0.5 4,-3.1 -22,-0.0 5,-0.3 -0.937 96.0 -63.6-166.5-175.2 -0.6 -7.5 -14.6 41 41 A K T 4 S+ 0 0 108 -2,-0.3 4,-0.1 2,-0.2 -23,-0.1 0.748 129.3 53.9 -56.3 -23.2 -2.1 -7.9 -11.1 42 42 A A T >4>S+ 0 0 0 -25,-0.2 3,-1.4 2,-0.2 5,-1.0 0.988 118.7 26.0 -74.8 -71.4 -1.9 -4.1 -11.0 43 43 A A G >45S+ 0 0 36 -6,-1.5 3,-2.3 1,-0.3 4,-0.3 0.889 117.5 62.3 -60.5 -40.9 -3.7 -2.9 -14.2 44 44 A A G 3<5S+ 0 0 78 -4,-3.1 -1,-0.3 1,-0.3 -3,-0.2 0.664 97.2 61.5 -59.8 -14.8 -5.8 -6.1 -14.2 45 45 A A G < 5S- 0 0 16 -3,-1.4 -1,-0.3 -5,-0.3 -2,-0.2 0.166 125.4-102.3 -97.2 16.7 -7.1 -4.8 -10.9 46 46 A N T < 5 + 0 0 148 -3,-2.3 2,-0.3 1,-0.2 -3,-0.2 0.846 69.0 161.4 66.2 34.5 -8.5 -1.7 -12.5 47 47 A L < + 0 0 15 -5,-1.0 -1,-0.2 -4,-0.3 -11,-0.1 -0.645 13.4 176.1 -89.6 144.9 -5.6 0.3 -11.1 48 48 A C > - 0 0 64 -2,-0.3 3,-1.5 -13,-0.1 2,-1.0 -0.997 38.4-103.8-150.4 143.5 -4.7 3.7 -12.6 49 49 A P T 3 S+ 0 0 71 0, 0.0 -15,-0.1 0, 0.0 -13,-0.1 -0.529 106.0 44.6 -69.8 100.0 -2.1 6.5 -11.8 50 50 A G T 3 S+ 0 0 22 -2,-1.0 40,-0.1 1,-0.3 -16,-0.1 0.168 74.8 125.8 152.7 -19.9 -4.2 9.2 -10.1 51 51 A D < - 0 0 26 -3,-1.5 -18,-0.7 1,-0.1 2,-0.6 -0.208 59.7-118.6 -63.3 156.1 -6.4 7.4 -7.6 52 52 A V B -G 32 0D 16 -20,-0.2 2,-1.4 1,-0.0 33,-0.8 -0.884 14.2-137.2-104.2 120.9 -6.4 8.5 -4.0 53 53 A I E +B 84 0A 9 -22,-2.9 -22,-0.4 -2,-0.6 31,-0.2 -0.593 28.6 171.7 -77.5 91.9 -5.3 6.0 -1.4 54 54 A L E + 0 0 36 29,-2.3 7,-1.9 -2,-1.4 2,-0.3 0.916 69.9 2.5 -66.7 -44.3 -7.8 6.6 1.3 55 55 A A E -BC 83 60A 11 28,-1.0 28,-2.1 5,-0.3 2,-0.4 -0.999 67.6-136.8-147.2 143.6 -6.7 3.6 3.3 56 56 A I E > S- C 0 59A 2 3,-3.1 3,-1.2 -2,-0.3 26,-0.2 -0.860 84.0 -15.1-104.6 133.2 -4.0 0.9 3.0 57 57 A D T 3 S- 0 0 28 -2,-0.4 -1,-0.2 1,-0.3 25,-0.2 0.865 134.2 -47.7 44.8 42.8 -4.7 -2.8 3.7 58 58 A G T 3 S+ 0 0 57 23,-1.8 2,-0.4 -3,-0.3 -1,-0.3 0.790 121.2 112.4 71.4 27.7 -7.9 -1.7 5.4 59 59 A F E < -C 56 0A 113 -3,-1.2 -3,-3.1 22,-0.3 -1,-0.1 -0.895 67.1-127.2-137.5 105.8 -6.1 1.0 7.4 60 60 A G E -C 55 0A 44 -2,-0.4 3,-0.4 -5,-0.3 -5,-0.3 -0.018 14.5-130.4 -46.6 151.9 -6.7 4.6 6.7 61 61 A T + 0 0 17 -7,-1.9 3,-0.2 1,-0.2 -36,-0.1 -0.251 66.3 125.6-101.7 44.2 -3.7 6.8 6.1 62 62 A E S S+ 0 0 162 1,-0.2 -1,-0.2 -2,-0.1 -2,-0.0 0.864 93.0 14.6 -68.7 -36.9 -4.6 9.5 8.6 63 63 A S S S+ 0 0 78 -3,-0.4 2,-0.7 2,-0.1 -1,-0.2 0.004 103.8 107.4-126.6 26.0 -1.2 9.2 10.3 64 64 A M - 0 0 12 -3,-0.2 -39,-0.7 4,-0.0 -38,-0.1 -0.897 52.0-162.1-112.0 105.7 0.6 7.2 7.7 65 65 A T > - 0 0 38 -2,-0.7 4,-2.7 -41,-0.2 3,-0.3 -0.256 38.5 -94.2 -78.7 169.6 3.2 9.3 5.8 66 66 A H H > S+ 0 0 38 1,-0.3 4,-1.2 2,-0.2 -42,-0.1 0.915 128.7 49.9 -48.6 -50.1 4.8 8.3 2.4 67 67 A A H > S+ 0 0 72 1,-0.2 4,-0.7 2,-0.2 -1,-0.3 0.868 111.0 50.1 -58.3 -38.2 7.7 6.7 4.2 68 68 A D H >> S+ 0 0 76 -3,-0.3 4,-1.7 1,-0.2 3,-1.2 0.895 100.1 63.4 -67.9 -41.2 5.3 4.8 6.4 69 69 A A H 3X S+ 0 0 1 -4,-2.7 4,-2.5 1,-0.3 5,-0.3 0.849 98.5 56.8 -51.6 -37.0 3.3 3.6 3.4 70 70 A Q H 3X S+ 0 0 98 -4,-1.2 4,-1.2 -3,-0.2 -1,-0.3 0.835 112.6 40.1 -64.9 -33.1 6.4 1.7 2.3 71 71 A D H << S+ 0 0 99 -3,-1.2 4,-0.4 -4,-0.7 -1,-0.2 0.599 118.6 48.3 -90.0 -14.1 6.5 -0.2 5.6 72 72 A R H < S+ 0 0 85 -4,-1.7 -2,-0.2 2,-0.1 -3,-0.2 0.692 114.3 44.3 -96.3 -24.7 2.7 -0.6 5.7 73 73 A I H >< S+ 0 0 16 -4,-2.5 3,-1.2 -5,-0.3 -3,-0.2 0.861 114.0 47.4 -86.4 -41.2 2.4 -1.8 2.1 74 74 A K T 3< S+ 0 0 147 -4,-1.2 -59,-0.2 -5,-0.3 -3,-0.1 0.849 111.3 52.1 -68.6 -34.9 5.3 -4.3 2.2 75 75 A A T 3 S+ 0 0 50 -4,-0.4 -1,-0.3 -5,-0.1 -2,-0.1 0.184 90.2 122.0 -86.7 17.4 4.1 -5.7 5.6 76 76 A A < - 0 0 22 -3,-1.2 2,-0.1 1,-0.1 4,-0.1 0.065 64.9 -97.1 -68.0-175.1 0.6 -6.2 4.0 77 77 A S - 0 0 58 2,-0.5 -1,-0.1 -63,-0.1 -62,-0.0 -0.416 52.2 -72.9-100.4 178.2 -1.2 -9.5 3.8 78 78 A Y S S+ 0 0 166 -65,-0.1 -65,-2.4 -2,-0.1 2,-0.4 0.746 128.2 34.6 -41.3 -25.3 -1.5 -12.1 1.0 79 79 A Q E S-D 12 0B 76 -67,-0.2 2,-0.6 -66,-0.1 -2,-0.5 -0.995 80.8-137.3-138.9 131.1 -3.7 -9.5 -0.5 80 80 A L E -D 11 0B 0 -69,-1.6 -69,-2.2 -2,-0.4 2,-1.0 -0.768 12.4-157.4 -90.4 121.1 -3.5 -5.7 -0.4 81 81 A C E -D 10 0B 42 -2,-0.6 -23,-1.8 -71,-0.2 2,-0.6 -0.781 15.6-179.7-101.0 92.4 -6.8 -3.9 0.2 82 82 A L - 0 0 3 -73,-2.6 2,-0.8 -2,-1.0 -73,-0.4 -0.828 16.4-150.8 -96.8 120.8 -6.5 -0.4 -1.1 83 83 A K E - B 0 55A 49 -28,-2.1 -29,-2.3 -2,-0.6 -28,-1.0 -0.800 17.2-166.5 -94.1 107.6 -9.5 1.8 -0.7 84 84 A I E -AB 7 53A 12 -77,-2.6 -77,-2.0 -2,-0.8 -31,-0.2 -0.490 26.0-135.4 -90.0 161.8 -9.6 4.5 -3.5 85 85 A D - 0 0 7 -33,-0.8 12,-0.3 -79,-0.2 -80,-0.1 0.534 26.9-145.7 -91.4 -8.9 -11.8 7.6 -3.6 86 86 A R + 0 0 138 -34,-0.2 2,-0.5 1,-0.2 3,-0.1 0.881 48.7 143.7 43.0 47.5 -12.6 7.0 -7.2 87 87 A A > + 0 0 25 1,-0.2 3,-1.4 3,-0.1 -1,-0.2 -0.685 24.4 175.1-117.9 77.0 -12.7 10.7 -7.7 88 88 A E T 3 S+ 0 0 185 -2,-0.5 2,-0.8 1,-0.3 -1,-0.2 0.889 83.7 55.4 -45.5 -47.0 -11.3 11.4 -11.2 89 89 A T T > + 0 0 98 1,-0.2 2,-1.9 -3,-0.1 3,-0.7 -0.114 69.1 140.8 -81.6 39.6 -12.1 15.1 -10.8 90 90 A R T < + 0 0 102 -3,-1.4 -1,-0.2 -2,-0.8 -2,-0.1 -0.196 41.9 95.4 -77.6 47.6 -10.1 15.1 -7.5 91 91 A L T 3 S- 0 0 148 -2,-1.9 -1,-0.2 0, 0.0 -2,-0.1 0.847 103.6 -0.3-101.2 -55.4 -8.8 18.6 -8.5 92 92 A W S < S+ 0 0 234 -3,-0.7 -2,-0.1 3,-0.0 -3,-0.0 -0.092 86.6 149.6-128.1 33.2 -11.1 21.0 -6.6 93 93 A S - 0 0 60 -4,-0.2 -3,-0.0 1,-0.2 -6,-0.0 -0.566 35.2-158.2 -74.2 121.8 -13.4 18.6 -4.9 94 94 A P S S+ 0 0 133 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 0.758 77.7 30.5 -69.7 -25.6 -14.7 20.0 -1.6 95 95 A Q - 0 0 159 -3,-0.0 2,-0.3 3,-0.0 -2,-0.0 -0.654 66.1-167.2-124.5-178.8 -15.6 16.5 -0.4 96 96 A V - 0 0 68 -2,-0.2 -10,-0.1 -6,-0.0 -11,-0.0 -0.908 46.9 -66.7-171.8 142.5 -14.3 13.0 -0.8 97 97 A S - 0 0 11 -12,-0.3 -93,-0.1 -2,-0.3 -10,-0.0 -0.029 48.2-168.0 -35.2 107.3 -15.3 9.4 -0.0 98 98 A S - 0 0 108 -95,-0.2 -1,-0.1 -13,-0.0 -94,-0.1 0.997 6.2-177.8 -67.2 -67.1 -15.2 9.4 3.8 99 99 A G - 0 0 30 -96,-0.1 -16,-0.0 -93,-0.0 -2,-0.0 0.997 15.7-160.6 62.7 67.2 -15.5 5.7 4.5 100 100 A P - 0 0 122 0, 0.0 2,-0.2 0, 0.0 -1,-0.0 -0.044 10.4-167.2 -69.8 176.8 -15.6 5.7 8.3 101 101 A S - 0 0 111 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.700 16.9-129.9-172.9 115.0 -14.8 2.8 10.6 102 102 A S 0 0 133 -2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.180 360.0 360.0 -64.0 159.7 -15.4 2.3 14.3 103 103 A G 0 0 124 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.558 360.0 360.0-130.8 360.0 -12.5 1.1 16.5