==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 31-MAR-04 1VEJ . COMPND 2 MOLECULE: RIKEN CDNA 4931431F19; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR Y.HIGUCHI,T.ABE,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6314.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 55.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 127.1 8.3 -36.6 22.2 2 2 A S + 0 0 127 1,-0.7 2,-0.3 0, 0.0 0, 0.0 0.207 360.0 33.6-165.3 -46.4 11.4 -34.5 22.9 3 3 A S - 0 0 111 2,-0.1 -1,-0.7 0, 0.0 2,-0.4 -0.761 64.8-135.9-122.1 168.3 11.4 -31.4 20.7 4 4 A G + 0 0 73 -2,-0.3 2,-0.2 -3,-0.1 0, 0.0 -0.975 45.9 112.7-132.3 118.9 8.7 -29.1 19.4 5 5 A S - 0 0 124 -2,-0.4 2,-0.3 0, 0.0 -2,-0.1 -0.837 40.2-145.4 179.9 142.0 8.6 -27.8 15.8 6 6 A S + 0 0 128 -2,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.875 21.3 160.8-118.4 150.8 6.6 -28.1 12.6 7 7 A G + 0 0 62 -2,-0.3 -1,-0.1 3,-0.0 0, 0.0 0.548 6.7 177.2-127.0 -75.5 7.6 -28.1 9.0 8 8 A A - 0 0 100 2,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.950 69.5 -24.0 57.5 93.9 5.2 -29.5 6.5 9 9 A R S S- 0 0 232 1,-0.1 2,-0.3 0, 0.0 3,-0.1 0.224 72.9-120.2 59.1 169.6 6.8 -29.0 3.1 10 10 A A - 0 0 89 1,-0.5 -1,-0.1 0, 0.0 -2,-0.1 -0.897 69.5 -7.8-152.0 116.3 9.3 -26.3 2.4 11 11 A C + 0 0 136 -2,-0.3 -1,-0.5 1,-0.1 2,-0.1 0.668 59.2 175.6 67.2 126.8 9.0 -23.5 -0.1 12 12 A S - 0 0 111 -3,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.522 12.1-160.6-166.5 89.0 6.1 -23.6 -2.5 13 13 A Q - 0 0 159 -2,-0.1 2,-0.4 2,-0.0 0, 0.0 -0.476 2.4-158.9 -75.3 144.2 5.5 -20.7 -4.9 14 14 A S + 0 0 111 -2,-0.2 2,-0.3 2,-0.0 -1,-0.0 -0.821 44.3 105.2-128.9 91.1 2.0 -20.3 -6.4 15 15 A S + 0 0 69 -2,-0.4 -2,-0.0 2,-0.0 4,-0.0 -0.940 13.2 120.1-165.8 142.9 2.0 -18.3 -9.6 16 16 A Q S S+ 0 0 191 -2,-0.3 -2,-0.0 3,-0.0 -1,-0.0 0.089 87.8 28.8-164.5 -66.0 1.7 -18.9 -13.3 17 17 A T S S+ 0 0 128 2,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.690 100.3 99.5 -84.2 -21.6 -1.2 -17.1 -15.0 18 18 A A - 0 0 66 1,-0.0 -3,-0.0 2,-0.0 0, 0.0 -0.270 61.3-153.2 -64.5 152.5 -1.1 -14.3 -12.5 19 19 A L - 0 0 129 -4,-0.0 2,-1.6 2,-0.0 -2,-0.1 -0.930 27.1-100.0-130.4 153.7 0.7 -11.1 -13.5 20 20 A P + 0 0 137 0, 0.0 2,-0.6 0, 0.0 3,-0.1 -0.568 50.0 175.7 -75.0 89.5 2.5 -8.4 -11.5 21 21 A T > - 0 0 60 -2,-1.6 3,-1.1 1,-0.1 4,-0.1 -0.877 24.7-165.5-102.3 121.4 -0.3 -5.8 -11.4 22 22 A S G >> S+ 0 0 88 -2,-0.6 3,-0.9 1,-0.3 4,-0.6 0.828 94.9 53.6 -70.4 -33.2 0.4 -2.6 -9.4 23 23 A L G 34 S+ 0 0 138 1,-0.2 -1,-0.3 2,-0.2 -2,-0.0 -0.019 92.9 78.4 -90.5 29.1 -3.3 -1.8 -9.5 24 24 A F G <4 S+ 0 0 140 -3,-1.1 -1,-0.2 2,-0.1 -2,-0.2 0.441 97.1 38.6-112.3 -7.5 -4.0 -5.2 -8.1 25 25 A T T <> S+ 0 0 37 -3,-0.9 4,-1.5 2,-0.1 3,-0.2 0.568 104.7 65.1-114.5 -21.1 -3.1 -4.4 -4.5 26 26 A E T < S+ 0 0 55 -4,-0.6 -3,-0.1 1,-0.2 -2,-0.1 0.450 109.2 42.7 -81.5 -1.3 -4.6 -0.9 -4.4 27 27 A G T 4 S+ 0 0 55 2,-0.1 -1,-0.2 3,-0.1 -2,-0.1 0.434 112.7 52.0-119.2 -8.7 -8.0 -2.4 -4.9 28 28 A R T 4 S+ 0 0 174 -3,-0.2 3,-0.3 1,-0.1 -2,-0.2 0.909 125.7 17.7 -91.9 -59.5 -7.6 -5.4 -2.5 29 29 A Y S X S+ 0 0 27 -4,-1.5 4,-2.2 1,-0.2 5,-0.2 -0.243 83.3 130.3-108.4 42.0 -6.5 -3.8 0.7 30 30 A Q H > S+ 0 0 123 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.929 77.6 45.3 -58.8 -48.5 -7.5 -0.3 -0.2 31 31 A Q H > S+ 0 0 114 -3,-0.3 4,-2.2 1,-0.2 -1,-0.2 0.869 107.5 60.9 -63.0 -38.4 -9.4 0.1 3.1 32 32 A E H >> S+ 0 0 51 1,-0.2 4,-2.3 2,-0.2 3,-0.7 0.957 100.3 51.5 -52.3 -59.3 -6.4 -1.4 4.9 33 33 A L H 3X S+ 0 0 11 -4,-2.2 4,-1.3 1,-0.3 -1,-0.2 0.861 111.6 49.8 -45.9 -41.1 -4.0 1.4 3.8 34 34 A E H 3< S+ 0 0 119 -4,-1.3 -1,-0.3 2,-0.2 -2,-0.2 0.853 108.5 53.7 -67.2 -36.1 -6.6 3.8 5.1 35 35 A E H XX S+ 0 0 68 -4,-2.2 3,-4.0 -3,-0.7 4,-2.8 0.978 106.3 48.5 -61.8 -59.5 -6.7 1.9 8.4 36 36 A L H 3X>S+ 0 0 0 -4,-2.3 4,-2.9 1,-0.3 5,-2.9 0.826 100.3 68.8 -49.9 -34.0 -3.0 2.0 9.0 37 37 A K H 3<5S+ 0 0 138 -4,-1.3 -1,-0.3 -5,-0.4 -2,-0.2 0.657 115.0 27.8 -60.2 -14.4 -3.4 5.7 8.3 38 38 A A H <45S+ 0 0 87 -3,-4.0 -2,-0.3 -4,-0.2 -1,-0.2 0.677 113.6 62.6-114.0 -37.0 -5.3 5.7 11.5 39 39 A L H <5S- 0 0 94 -4,-2.8 -3,-0.2 1,-0.1 -2,-0.2 0.893 136.5 -68.0 -56.9 -42.2 -3.7 2.8 13.3 40 40 A G T <5S+ 0 0 58 -4,-2.9 -3,-0.2 -5,-0.2 2,-0.2 0.368 106.5 75.3 152.8 40.5 -0.4 4.7 13.2 41 41 A F < + 0 0 37 -5,-2.9 3,-0.1 -6,-0.2 21,-0.0 -0.677 34.2 178.0-145.5-161.7 0.8 5.0 9.7 42 42 A A + 0 0 60 -2,-0.2 2,-2.0 1,-0.1 -5,-0.2 0.099 51.1 110.9 179.7 -38.3 0.2 6.7 6.4 43 43 A N > - 0 0 99 1,-0.2 4,-4.2 -7,-0.1 5,-0.2 -0.370 43.5-178.5 -60.1 84.3 2.8 5.5 3.9 44 44 A R H > S+ 0 0 107 -2,-2.0 4,-3.9 2,-0.2 5,-0.2 0.954 79.0 52.1 -50.1 -60.5 0.3 3.6 1.8 45 45 A D H > S+ 0 0 102 1,-0.3 4,-3.5 2,-0.2 -1,-0.2 0.902 116.8 40.4 -41.9 -53.7 3.0 2.2 -0.5 46 46 A A H > S+ 0 0 18 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.914 113.3 54.3 -63.0 -44.6 4.9 1.0 2.5 47 47 A N H X S+ 0 0 1 -4,-4.2 4,-2.6 2,-0.2 -2,-0.2 0.863 115.1 42.0 -56.9 -37.5 1.6 -0.1 4.1 48 48 A L H X>S+ 0 0 7 -4,-3.9 4,-3.1 2,-0.2 5,-0.6 0.984 108.8 54.4 -72.5 -62.7 0.9 -2.1 1.0 49 49 A Q H X5S+ 0 0 147 -4,-3.5 4,-0.5 1,-0.3 -2,-0.2 0.805 118.4 40.4 -39.9 -36.2 4.4 -3.5 0.4 50 50 A A H X5S+ 0 0 5 -4,-2.2 4,-1.4 -5,-0.2 -1,-0.3 0.921 115.3 49.6 -79.9 -49.0 4.0 -4.8 4.0 51 51 A L H ><>S+ 0 0 0 -4,-2.6 5,-4.2 1,-0.3 3,-1.9 0.965 111.8 47.5 -53.0 -60.0 0.4 -5.8 3.6 52 52 A V H ><5S+ 0 0 58 -4,-3.1 3,-1.4 1,-0.3 -1,-0.3 0.812 107.6 59.6 -51.4 -31.7 1.0 -7.7 0.4 53 53 A A H 3< - 0 0 70 -6,-0.9 4,-2.9 -3,-0.3 3,-0.4 -0.716 28.0-169.8 -90.0 90.2 -2.9 -9.0 6.6 58 58 A I H > S+ 0 0 19 -2,-1.3 4,-4.0 1,-0.3 -1,-0.2 0.874 86.4 60.9 -44.2 -44.7 -2.9 -5.5 8.0 59 59 A H H > S+ 0 0 139 1,-0.3 4,-1.5 2,-0.2 -1,-0.3 0.944 112.0 35.0 -47.7 -59.7 -2.4 -7.1 11.4 60 60 A A H > S+ 0 0 18 -3,-0.4 4,-1.8 1,-0.2 -1,-0.3 0.768 115.8 60.0 -66.7 -25.9 0.8 -8.7 10.3 61 61 A A H X S+ 0 0 0 -4,-2.9 4,-2.6 2,-0.2 -2,-0.2 0.915 100.0 54.9 -67.3 -44.5 1.4 -5.5 8.3 62 62 A I H >X S+ 0 0 40 -4,-4.0 4,-2.1 2,-0.2 3,-0.9 0.972 108.0 46.5 -51.1 -66.2 1.2 -3.4 11.4 63 63 A E H 3X>S+ 0 0 107 -4,-1.5 5,-1.4 1,-0.3 4,-0.6 0.873 115.7 47.8 -43.4 -46.6 4.0 -5.2 13.2 64 64 A M H 3<5S+ 0 0 66 -4,-1.8 3,-0.4 1,-0.2 -1,-0.3 0.823 115.2 44.5 -65.5 -32.8 6.0 -5.1 10.0 65 65 A L H <<5S+ 0 0 41 -4,-2.6 -2,-0.3 -3,-0.9 -1,-0.2 0.590 102.9 67.4 -85.6 -13.2 5.2 -1.4 9.7 66 66 A L H <5S- 0 0 126 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.646 130.3 -90.5 -79.1 -16.4 5.9 -1.0 13.4 67 67 A G T <5S+ 0 0 68 -4,-0.6 2,-0.5 -3,-0.4 -3,-0.2 0.688 86.2 133.2 110.2 32.9 9.5 -1.8 12.6 68 68 A A < + 0 0 52 -5,-1.4 -3,-0.1 -6,-0.2 -2,-0.1 -0.554 14.9 145.4-111.7 63.8 9.6 -5.6 13.0 69 69 A S - 0 0 87 -2,-0.5 -1,-0.2 1,-0.2 3,-0.1 0.993 33.7-163.1 -61.5 -65.9 11.4 -6.5 9.8 70 70 A G + 0 0 73 -3,-0.2 -1,-0.2 1,-0.1 2,-0.1 -0.782 57.2 63.8 120.0 -85.7 13.3 -9.5 11.2 71 71 A P - 0 0 112 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.386 64.0-165.2 -75.0 153.3 16.2 -10.4 8.9 72 72 A S + 0 0 121 -2,-0.1 0, 0.0 -3,-0.1 0, 0.0 -0.965 36.2 119.3-139.5 154.4 19.0 -7.9 8.3 73 73 A S 0 0 131 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.033 360.0 360.0-173.5 -58.2 21.8 -7.6 5.8 74 74 A G 0 0 118 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.310 360.0 360.0 153.4 360.0 21.7 -4.3 3.9