==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 06-APR-04 1VEX . COMPND 2 MOLECULE: F-SPONDIN; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR K.PAAKKONEN,H.TOSSAVAINEN,P.PERMI,I.KILPELAINEN,P.GUNTERT . 56 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5150.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 33.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 17.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 611 A G 0 0 117 0, 0.0 2,-1.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 98.2 -24.0 1.0 11.1 2 612 A S + 0 0 138 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.630 360.0 176.5 -77.5 90.5 -22.8 3.6 8.6 3 613 A I - 0 0 127 -2,-1.4 3,-0.1 1,-0.1 0, 0.0 -0.552 33.4 -93.1 -92.7 161.9 -19.2 2.2 8.0 4 614 A P - 0 0 107 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.197 67.8 -58.7 -68.0 167.4 -16.5 3.5 5.6 5 615 A a - 0 0 20 1,-0.1 2,-0.6 32,-0.0 28,-0.0 -0.216 60.3-105.5 -54.1 130.3 -16.3 2.1 2.1 6 616 A L + 0 0 79 -3,-0.1 26,-1.9 25,-0.0 27,-0.6 -0.459 55.2 163.7 -61.7 102.8 -15.7 -1.7 2.0 7 617 A L B -A 31 0A 35 -2,-0.6 24,-0.2 24,-0.2 3,-0.1 -0.942 38.9-111.3-126.3 144.9 -12.0 -2.0 1.0 8 618 A S - 0 0 29 22,-2.4 3,-0.1 -2,-0.3 24,-0.0 -0.320 45.0 -92.1 -70.9 160.8 -9.7 -5.1 1.3 9 619 A P - 0 0 111 0, 0.0 2,-0.4 0, 0.0 21,-0.2 -0.361 50.7 -90.2 -70.6 156.2 -6.8 -4.9 3.9 10 620 A W - 0 0 70 19,-0.1 19,-0.2 -3,-0.1 3,-0.1 -0.573 46.2-129.6 -69.6 123.0 -3.4 -3.7 2.7 11 621 A S - 0 0 69 17,-0.9 3,-0.1 -2,-0.4 -1,-0.1 -0.126 40.6 -71.6 -65.8 164.1 -1.5 -6.7 1.5 12 622 A E - 0 0 183 1,-0.1 16,-0.2 15,-0.0 2,-0.2 -0.244 57.7 -99.9 -59.7 148.0 2.1 -7.3 2.7 13 623 A W - 0 0 69 -3,-0.1 14,-0.1 14,-0.1 -1,-0.1 -0.484 35.1-137.3 -69.9 139.3 4.8 -4.9 1.4 14 624 A S - 0 0 98 12,-0.8 -1,-0.1 1,-0.2 3,-0.1 -0.110 43.9 -58.1 -85.1-175.2 7.0 -6.2 -1.4 15 625 A D - 0 0 131 1,-0.1 11,-0.3 10,-0.1 -1,-0.2 -0.261 69.2 -91.7 -64.4 154.4 10.8 -5.7 -1.7 16 626 A b - 0 0 14 2,-0.2 9,-0.2 9,-0.1 -1,-0.1 -0.284 28.6-112.6 -66.8 155.5 12.1 -2.1 -1.6 17 627 A S S S+ 0 0 109 7,-3.1 2,-0.3 33,-0.1 8,-0.1 0.450 100.8 47.2 -69.7 -1.8 12.6 -0.1 -4.8 18 628 A V - 0 0 34 6,-0.2 -2,-0.2 32,-0.2 3,-0.1 -0.949 64.3-149.2-138.9 159.3 16.4 -0.1 -4.1 19 629 A T S S+ 0 0 112 1,-0.3 2,-0.3 -2,-0.3 -1,-0.1 0.711 86.2 5.2 -98.0 -28.9 19.0 -2.8 -3.2 20 630 A c S S+ 0 0 18 2,-0.2 -1,-0.3 32,-0.2 34,-0.2 -0.983 109.0 8.7-153.7 154.9 21.3 -0.4 -1.2 21 631 A G B S+B 52 0B 25 32,-2.2 31,-2.3 31,-0.7 -3,-0.1 -0.247 105.2 8.9 71.9-160.4 21.3 3.2 -0.0 22 632 A K S S+ 0 0 154 29,-0.2 2,-0.3 27,-0.0 -2,-0.2 -0.169 82.2 130.0 -50.7 141.7 18.4 5.7 -0.2 23 633 A G - 0 0 21 -5,-0.1 27,-2.1 -4,-0.1 2,-0.2 -0.992 39.0-138.2-179.3 176.9 15.0 4.2 -1.3 24 634 A M E -C 49 0C 99 25,-0.3 -7,-3.1 -2,-0.3 2,-0.3 -0.871 10.8-147.0-145.0 171.0 11.2 3.6 -0.9 25 635 A R E -C 48 0C 83 23,-2.6 23,-2.6 -2,-0.2 2,-0.3 -0.928 9.7-158.0-138.8 164.5 8.6 0.8 -1.2 26 636 A T E -C 47 0C 73 -11,-0.3 -12,-0.8 -2,-0.3 2,-0.3 -0.926 8.0-178.4-144.6 159.5 4.9 0.7 -2.3 27 637 A R E -C 46 0C 58 19,-2.2 19,-2.5 -2,-0.3 2,-0.2 -0.965 7.0-164.6-155.0 157.7 1.9 -1.6 -1.8 28 638 A Q E -C 45 0C 104 -2,-0.3 -17,-0.9 17,-0.2 17,-0.2 -0.806 5.9-168.3-140.4 174.3 -1.7 -1.6 -3.0 29 639 A R - 0 0 38 15,-2.2 2,-0.3 -2,-0.2 -19,-0.1 -0.824 19.2-122.4-149.6-177.1 -5.2 -3.2 -2.3 30 640 A M - 0 0 145 -2,-0.2 -22,-2.4 -21,-0.2 2,-0.2 -0.918 25.7-102.1-137.5 157.9 -8.5 -3.4 -4.1 31 641 A L B -A 7 0A 98 -2,-0.3 -24,-0.2 -24,-0.2 -25,-0.0 -0.539 23.4-173.4 -79.1 149.8 -12.1 -2.4 -3.3 32 642 A K + 0 0 140 -26,-1.9 2,-2.1 -2,-0.2 3,-0.3 0.029 37.9 133.2-131.4 21.6 -14.5 -5.3 -2.3 33 643 A S > + 0 0 26 -27,-0.6 3,-1.8 1,-0.2 5,-0.2 -0.398 14.4 152.2 -73.4 57.2 -17.8 -3.2 -2.2 34 644 A L T 3 + 0 0 159 -2,-2.1 -1,-0.2 1,-0.3 -3,-0.0 0.830 67.1 66.1 -61.2 -31.4 -19.8 -5.7 -4.2 35 645 A A T 3 S- 0 0 87 -3,-0.3 -1,-0.3 1,-0.1 -2,-0.1 0.403 110.8-123.2 -71.7 1.9 -23.0 -4.4 -2.4 36 646 A E < + 0 0 170 -3,-1.8 -2,-0.1 1,-0.1 -1,-0.1 0.911 42.8 174.3 52.0 52.5 -22.4 -1.1 -4.2 37 647 A L - 0 0 87 -4,-0.2 2,-0.3 1,-0.1 -1,-0.1 0.679 57.1 -84.1 -57.6 -24.5 -22.3 0.9 -0.9 38 648 A G - 0 0 55 -5,-0.2 2,-0.2 2,-0.0 -1,-0.1 -0.954 53.1 -75.9 155.5-131.0 -21.4 4.0 -3.0 39 649 A D - 0 0 150 -2,-0.3 2,-0.3 -3,-0.1 -34,-0.0 -0.778 42.8-162.0-167.6 111.1 -17.9 5.1 -4.3 40 650 A a - 0 0 50 -2,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.839 27.2-131.7-106.4 151.4 -15.3 6.7 -1.9 41 651 A N + 0 0 171 -2,-0.3 -1,-0.1 2,-0.0 0, 0.0 0.279 64.4 137.6 -77.6 8.3 -12.2 8.8 -2.8 42 652 A E - 0 0 104 1,-0.1 2,-0.2 2,-0.0 -2,-0.1 -0.139 58.7 -91.5 -57.6 158.3 -10.2 6.5 -0.4 43 653 A D + 0 0 84 1,-0.1 -1,-0.1 -15,-0.0 3,-0.1 -0.482 33.7 175.4 -79.9 140.6 -6.8 5.2 -1.2 44 654 A L S S+ 0 0 74 -2,-0.2 -15,-2.2 1,-0.2 2,-0.3 0.476 74.6 44.7-116.9 -13.8 -5.9 1.9 -3.0 45 655 A E E -C 28 0C 129 -17,-0.2 2,-0.3 -35,-0.0 -17,-0.2 -0.973 63.0-179.9-135.3 146.4 -2.1 2.5 -3.2 46 656 A Q E -C 27 0C 103 -19,-2.5 -19,-2.2 -2,-0.3 2,-0.3 -0.989 12.7-147.8-147.1 151.4 0.4 3.7 -0.6 47 657 A A E -C 26 0C 47 -2,-0.3 2,-0.3 -21,-0.2 -21,-0.2 -0.807 11.3-171.3-118.6 156.2 4.2 4.4 -0.4 48 658 A E E -C 25 0C 82 -23,-2.6 -23,-2.6 -2,-0.3 2,-0.3 -0.962 27.8-107.3-146.5 155.3 6.7 4.1 2.5 49 659 A K E +C 24 0C 164 -2,-0.3 -25,-0.3 -25,-0.2 2,-0.2 -0.698 40.0 163.9 -87.0 133.6 10.4 5.1 3.0 50 660 A b - 0 0 11 -27,-2.1 2,-0.4 -2,-0.3 -32,-0.2 -0.695 14.6-170.8-157.1 98.8 13.0 2.2 3.1 51 661 A M - 0 0 147 -2,-0.2 -29,-0.2 -29,-0.1 -30,-0.1 -0.782 16.0-146.9 -91.0 132.9 16.7 2.8 2.8 52 662 A L B -B 21 0B 55 -31,-2.3 -31,-0.7 -2,-0.4 -32,-0.2 -0.413 29.2 -88.2 -89.8 169.9 18.8 -0.4 2.4 53 663 A P - 0 0 83 0, 0.0 -32,-2.2 0, 0.0 -1,-0.2 0.067 66.7 -58.0 -68.3-176.3 22.4 -0.8 3.7 54 664 A E S S- 0 0 160 -34,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.247 72.0 -84.7 -59.7 156.8 25.5 0.2 1.7 55 665 A c 0 0 84 -35,-0.1 -1,-0.1 -3,-0.1 -35,-0.1 -0.533 360.0 360.0 -69.5 127.4 26.0 -1.5 -1.7 56 666 A P 0 0 160 0, 0.0 -1,-0.1 0, 0.0 -36,-0.0 -0.395 360.0 360.0 -70.5 360.0 27.7 -4.9 -1.4