==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GROWTH FACTOR 17-DEC-97 2VGH . COMPND 2 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR-165; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.J.FAIRBROTHER,M.A.CHAMPE,H.W.CHRISTINGER,B.A.KEYT, . 55 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5127.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 25 45.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 14.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 76 0, 0.0 22,-0.1 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 -58.8 5.3 -22.0 8.6 2 2 A R + 0 0 203 3,-0.0 0, 0.0 0, 0.0 0, 0.0 0.460 360.0 46.1 76.0 142.0 4.4 -24.2 5.6 3 3 A Q S S- 0 0 145 2,-0.1 0, 0.0 0, 0.0 0, 0.0 0.927 126.1 -66.5 56.4 50.9 0.9 -25.5 4.9 4 4 A E - 0 0 163 1,-0.1 0, 0.0 18,-0.0 0, 0.0 0.117 49.1-114.7 64.6 178.5 -0.5 -22.0 5.6 5 5 A N - 0 0 47 -4,-0.1 -1,-0.1 2,-0.0 20,-0.1 -0.617 23.1-148.2-150.5 84.6 -0.6 -20.1 8.9 6 6 A P + 0 0 123 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.343 29.2 170.9 -55.8 129.1 -4.1 -19.5 10.3 7 7 A a - 0 0 47 -2,-0.1 18,-0.1 13,-0.0 19,-0.0 -0.861 37.4-125.1-137.3 168.9 -4.2 -16.2 12.3 8 8 A G - 0 0 60 -2,-0.3 0, 0.0 17,-0.2 0, 0.0 -0.916 33.8-131.9-119.6 97.3 -6.6 -13.8 14.1 9 9 A P - 0 0 66 0, 0.0 11,-0.1 0, 0.0 17,-0.0 -0.140 6.5-139.7 -49.6 140.1 -6.1 -10.2 12.7 10 10 A b S S+ 0 0 88 5,-0.1 10,-0.0 18,-0.0 2,-0.0 0.948 81.4 66.0 -70.5 -53.5 -5.8 -7.5 15.4 11 11 A S S S- 0 0 27 2,-0.1 4,-0.1 4,-0.1 7,-0.0 -0.287 89.0-114.5 -72.6 158.5 -7.9 -4.8 13.7 12 12 A E - 0 0 146 2,-0.1 -1,-0.1 -2,-0.0 3,-0.1 0.977 66.6 -53.3 -61.2 -78.0 -11.7 -5.3 13.1 13 13 A R S S+ 0 0 160 0, 0.0 2,-2.0 0, 0.0 -2,-0.1 0.575 121.1 63.0-137.1 -59.9 -12.5 -5.5 9.4 14 14 A R + 0 0 193 1,-0.2 2,-1.2 2,-0.0 3,-0.4 -0.325 59.1 153.9 -82.6 55.3 -11.2 -2.5 7.2 15 15 A K > + 0 0 66 -2,-2.0 3,-1.1 1,-0.2 -1,-0.2 -0.165 15.9 134.1 -84.1 41.8 -7.6 -3.4 8.0 16 16 A H T 3 S+ 0 0 147 -2,-1.2 2,-0.3 1,-0.3 -1,-0.2 0.871 71.0 51.9 -57.9 -41.4 -6.3 -1.8 4.8 17 17 A L T 3 S+ 0 0 64 -3,-0.4 13,-1.4 30,-0.1 14,-0.6 -0.215 101.3 82.9 -94.9 41.0 -3.4 -0.1 6.6 18 18 A F E < -A 29 0A 52 -3,-1.1 2,-0.3 11,-0.3 11,-0.2 -0.950 50.9-167.5-138.8 159.5 -2.2 -3.3 8.4 19 19 A V E -A 28 0A 80 9,-2.7 9,-2.6 -2,-0.3 2,-0.4 -0.939 10.2-155.8-137.8 156.0 0.1 -6.3 7.8 20 20 A Q E -A 27 0A 54 -2,-0.3 7,-0.2 7,-0.2 -2,-0.0 -0.998 25.0-113.8-140.1 133.2 0.4 -9.5 9.8 21 21 A D > - 0 0 60 5,-2.5 4,-2.2 -2,-0.4 2,-1.3 -0.527 22.4-142.0 -68.8 119.1 3.3 -12.0 10.0 22 22 A P T 4 S+ 0 0 89 0, 0.0 -1,-0.1 0, 0.0 -18,-0.0 -0.171 94.4 40.3 -83.3 44.8 2.2 -15.3 8.5 23 23 A Q T 4 S+ 0 0 118 -2,-1.3 -2,-0.0 -22,-0.1 0, 0.0 0.314 127.8 22.3-143.2 -54.7 4.1 -17.4 11.1 24 24 A T T 4 S- 0 0 88 2,-0.1 3,-0.1 -19,-0.0 -3,-0.0 0.509 92.1-129.3 -99.7 -12.2 3.7 -15.7 14.5 25 25 A a < + 0 0 38 -4,-2.2 2,-0.3 1,-0.2 -17,-0.2 0.689 50.1 159.7 64.8 22.9 0.5 -13.8 13.7 26 26 A K - 0 0 150 -5,-0.2 -5,-2.5 -17,-0.0 2,-0.3 -0.626 31.2-139.9 -76.3 132.5 2.1 -10.6 15.1 27 27 A b E +A 20 0A 38 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.715 23.9 174.1 -98.9 142.8 0.3 -7.5 13.7 28 28 A S E -A 19 0A 74 -9,-2.6 -9,-2.7 -2,-0.3 2,-0.2 -0.989 34.4-110.5-140.9 147.0 1.9 -4.2 12.5 29 29 A c E -A 18 0A 25 -2,-0.3 -11,-0.3 -11,-0.2 19,-0.1 -0.563 19.1-137.1 -71.6 138.4 0.4 -1.1 10.9 30 30 A K S S+ 0 0 128 -13,-1.4 2,-0.6 -2,-0.2 -12,-0.2 0.824 97.8 58.4 -61.9 -35.6 1.4 -0.6 7.3 31 31 A N S S- 0 0 8 -14,-0.6 2,-0.2 17,-0.2 -1,-0.1 -0.907 80.6-166.3-101.2 113.0 1.9 3.1 8.1 32 32 A T >> - 0 0 62 -2,-0.6 4,-1.5 1,-0.1 3,-0.8 -0.600 35.0-112.6 -99.9 160.8 4.5 3.5 10.8 33 33 A D H 3> S+ 0 0 72 1,-0.2 4,-2.9 2,-0.2 8,-0.2 0.758 114.9 68.5 -61.3 -27.4 5.4 6.6 13.0 34 34 A S H 3> S+ 0 0 81 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.907 101.5 45.3 -55.1 -46.0 8.8 6.6 11.2 35 35 A R H <> S+ 0 0 114 -3,-0.8 4,-1.0 2,-0.2 -2,-0.2 0.916 113.2 49.3 -66.7 -44.6 7.0 7.6 7.9 36 36 A d H ><>S+ 0 0 0 -4,-1.5 5,-1.9 1,-0.2 3,-0.9 0.928 110.4 51.1 -58.1 -47.1 4.8 10.2 9.7 37 37 A K H ><5S+ 0 0 139 -4,-2.9 3,-1.7 1,-0.3 -1,-0.2 0.873 104.9 56.2 -59.1 -41.5 8.0 11.7 11.3 38 38 A A H 3<5S+ 0 0 73 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.748 112.1 43.5 -61.4 -25.1 9.7 11.9 7.9 39 39 A R T <<5S- 0 0 122 -4,-1.0 -1,-0.3 -3,-0.9 -2,-0.2 0.222 123.8-107.9 -99.8 9.2 6.6 14.0 6.9 40 40 A Q T < 5S+ 0 0 140 -3,-1.7 -3,-0.3 1,-0.3 2,-0.2 0.925 86.5 105.2 59.8 50.8 6.8 16.0 10.2 41 41 A L < - 0 0 53 -5,-1.9 2,-0.3 -8,-0.2 -1,-0.3 -0.806 63.8-124.9-140.1 176.0 3.7 14.3 11.6 42 42 A E E -B 51 0B 89 9,-2.5 9,-2.9 -2,-0.2 2,-0.3 -0.942 28.8-105.0-130.0 154.1 2.9 11.6 14.2 43 43 A L E -B 50 0B 29 -2,-0.3 2,-1.0 7,-0.2 7,-0.2 -0.618 13.8-142.7 -83.0 133.2 0.9 8.4 13.9 44 44 A N E >>> -B 49 0B 66 5,-2.6 4,-2.6 -2,-0.3 5,-0.7 -0.855 19.1-155.3 -89.2 100.6 -2.7 8.0 15.3 45 45 A E T 345S+ 0 0 167 -2,-1.0 -1,-0.1 1,-0.2 5,-0.0 0.556 83.2 62.1 -60.8 -12.4 -2.2 4.4 16.4 46 46 A R T 345S+ 0 0 222 3,-0.1 -1,-0.2 1,-0.1 -3,-0.0 0.955 124.6 12.6 -79.2 -54.6 -6.0 3.7 16.2 47 47 A T T <45S- 0 0 47 -3,-0.5 -2,-0.2 2,-0.1 -30,-0.1 0.543 99.1-129.7 -96.0 -14.1 -6.6 4.3 12.5 48 48 A c T <5 + 0 0 3 -4,-2.6 2,-0.3 1,-0.2 -17,-0.2 0.931 62.3 129.6 53.5 56.9 -2.8 4.3 11.6 49 49 A R E < -B 44 0B 156 -5,-0.7 -5,-2.6 -7,-0.1 2,-0.4 -0.914 63.9-100.5-128.1 156.6 -2.9 7.6 9.7 50 50 A d E +B 43 0B 38 -2,-0.3 -7,-0.2 -7,-0.2 2,-0.2 -0.686 44.0 173.7 -89.3 126.7 -0.6 10.6 10.2 51 51 A D E -B 42 0B 73 -9,-2.9 -9,-2.5 -2,-0.4 0, 0.0 -0.668 45.5 -55.4-121.4 174.6 -1.9 13.6 12.2 52 52 A K - 0 0 123 -2,-0.2 -1,-0.2 -11,-0.2 -11,-0.2 -0.209 48.4-135.6 -55.6 140.1 -0.4 16.9 13.5 53 53 A P S S- 0 0 46 0, 0.0 -12,-0.1 0, 0.0 -1,-0.1 0.996 73.6 -41.3 -67.8 -73.5 2.7 16.3 15.7 54 54 A R 0 0 186 -12,-0.0 -2,-0.0 -13,-0.0 -13,-0.0 -0.403 360.0 360.0-154.0 67.4 2.1 18.6 18.7 55 55 A R 0 0 203 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 0.372 360.0 360.0-135.4 360.0 0.7 21.8 17.2