==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC 31-AUG-04 1VM4 . COMPND 2 MOLECULE: PEPTIDE A4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.WANG,X.LI . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1480.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 69.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 83 0, 0.0 4,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 169.2 1.4 1.7 -0.5 2 2 A L >> + 0 0 132 2,-0.2 3,-1.8 1,-0.2 4,-1.0 0.930 360.0 52.8 -82.2 -51.2 3.8 2.9 2.2 3 3 A F H 3> S+ 0 0 135 1,-0.3 4,-3.4 2,-0.2 5,-0.3 0.777 96.5 72.9 -56.4 -23.6 5.9 -0.2 2.7 4 4 A D H 3> S+ 0 0 95 1,-0.3 4,-2.2 2,-0.2 -1,-0.3 0.906 97.9 46.3 -56.8 -40.6 6.3 -0.0 -1.1 5 5 A I H <> S+ 0 0 110 -3,-1.8 4,-0.6 -4,-0.4 -1,-0.3 0.792 112.9 50.9 -70.8 -28.1 8.6 2.9 -0.4 6 6 A V H X S+ 0 0 60 -4,-1.0 4,-2.5 2,-0.2 -2,-0.2 0.872 111.4 46.3 -76.1 -38.8 10.3 0.9 2.3 7 7 A K H X S+ 0 0 131 -4,-3.4 4,-2.1 1,-0.2 5,-0.2 0.868 109.3 54.2 -71.2 -37.0 10.8 -2.1 0.1 8 8 A K H < S+ 0 0 143 -4,-2.2 4,-0.4 -5,-0.3 -1,-0.2 0.734 112.6 47.0 -68.6 -20.9 12.1 0.1 -2.7 9 9 A L H >X S+ 0 0 88 -4,-0.6 4,-3.4 2,-0.2 3,-0.7 0.946 112.1 44.6 -83.6 -58.8 14.6 1.4 -0.2 10 10 A V H 3< S+ 0 0 103 -4,-2.5 -2,-0.2 3,-0.3 -3,-0.2 0.947 111.9 53.4 -48.7 -57.5 15.9 -1.8 1.4 11 11 A S T 3< S+ 0 0 98 -4,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.823 116.6 41.0 -49.3 -34.4 16.2 -3.5 -1.9 12 12 A D T <4 0 0 114 -3,-0.7 -2,-0.2 -4,-0.4 -1,-0.2 0.965 360.0 360.0 -79.2 -59.0 18.3 -0.5 -3.0 13 13 A F < 0 0 188 -4,-3.4 -3,-0.3 -5,-0.1 -2,-0.2 0.284 360.0 360.0-160.7 360.0 20.4 0.1 0.1