==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 15-JUL-04 1W3E . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L30E; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS CELER; . AUTHOR H.W.MA,C.F.LEE,M.D.ALLEN,M.BYCROFT,K.B.WONG . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5632.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 70.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 33.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 X M 0 0 219 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 146.6 -5.9 -7.7 17.9 2 1 X V - 0 0 27 1,-0.1 2,-1.0 91,-0.1 3,-0.1 -0.477 360.0-144.4 -65.7 118.8 -3.0 -6.5 15.7 3 2 X D > - 0 0 89 -2,-0.4 4,-3.3 1,-0.2 5,-0.3 -0.761 12.0-161.3 -86.1 100.0 -1.3 -3.4 17.2 4 3 X F H > S+ 0 0 25 -2,-1.0 4,-2.5 1,-0.2 5,-0.3 0.922 85.8 45.3 -51.9 -56.1 -0.3 -1.5 14.0 5 4 X A H > S+ 0 0 42 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.901 117.8 43.2 -58.7 -47.2 2.3 0.8 15.5 6 5 X F H > S+ 0 0 106 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.964 117.2 44.7 -63.0 -50.9 4.0 -2.0 17.5 7 6 X E H X S+ 0 0 14 -4,-3.3 4,-2.5 2,-0.2 87,-0.4 0.843 112.0 52.3 -66.9 -32.2 3.9 -4.6 14.7 8 7 X L H X S+ 0 0 2 -4,-2.5 4,-2.4 -5,-0.3 -1,-0.2 0.944 112.0 45.4 -69.6 -45.8 5.1 -2.2 12.0 9 8 X R H X S+ 0 0 155 -4,-1.8 4,-2.3 -5,-0.3 -2,-0.2 0.921 112.4 52.1 -59.8 -44.3 8.1 -1.1 14.2 10 9 X K H X S+ 0 0 66 -4,-2.5 4,-2.1 2,-0.2 81,-0.3 0.906 109.7 49.1 -62.4 -40.8 8.8 -4.8 14.9 11 10 X A H X S+ 0 0 0 -4,-2.5 4,-2.0 2,-0.2 -1,-0.2 0.924 110.9 50.9 -59.6 -46.0 8.8 -5.6 11.1 12 11 X Q H < S+ 0 0 53 -4,-2.4 5,-0.3 1,-0.2 -2,-0.2 0.889 117.8 38.9 -56.9 -41.0 11.1 -2.7 10.5 13 12 X D H < S+ 0 0 113 -4,-2.3 -1,-0.2 -5,-0.1 -2,-0.2 0.726 129.2 26.4 -86.2 -28.9 13.5 -3.9 13.2 14 13 X T H < S+ 0 0 51 -4,-2.1 -3,-0.2 -5,-0.2 76,-0.2 0.486 127.7 26.4-113.5 -10.3 13.4 -7.7 12.7 15 14 X G S < S- 0 0 23 -4,-2.0 2,-0.3 -5,-0.3 -3,-0.1 0.016 92.1 -81.4-123.5-135.8 12.5 -7.9 9.0 16 15 X K E +A 88 0A 95 72,-2.5 71,-2.4 -2,-0.1 72,-2.3 -0.938 38.9 171.3-150.0 123.8 12.9 -5.7 6.0 17 16 X I E -A 86 0A 26 -2,-0.3 2,-0.4 -5,-0.3 69,-0.2 -0.936 19.1-149.3-126.7 150.8 10.8 -2.8 4.9 18 17 X V E -A 85 0A 2 67,-2.2 67,-2.9 -2,-0.3 2,-0.3 -0.982 18.9-145.0-119.9 140.9 11.4 -0.2 2.1 19 18 X M E +A 84 0A 37 -2,-0.4 4,-0.3 65,-0.2 65,-0.3 -0.812 49.0 37.7-112.3 142.0 10.1 3.4 2.5 20 19 X G S > S- 0 0 25 63,-3.3 4,-2.5 -2,-0.3 5,-0.2 -0.018 82.5 -86.6 103.5 156.4 8.6 5.9 0.0 21 20 X A H > S+ 0 0 25 1,-0.2 4,-3.2 2,-0.2 5,-0.2 0.877 120.6 55.5 -65.0 -40.4 6.4 5.8 -3.0 22 21 X R H > S+ 0 0 183 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.948 115.2 35.7 -57.2 -57.2 9.2 5.1 -5.5 23 22 X K H > S+ 0 0 78 -4,-0.3 4,-2.6 2,-0.2 5,-0.2 0.867 117.3 54.2 -69.0 -38.1 10.5 2.0 -3.8 24 23 X S H X S+ 0 0 0 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.948 111.4 45.2 -59.0 -50.0 7.0 0.9 -2.8 25 24 X I H X S+ 0 0 23 -4,-3.2 4,-2.8 1,-0.2 -2,-0.2 0.938 113.3 50.7 -59.5 -47.7 5.8 1.1 -6.4 26 25 X Q H X S+ 0 0 99 -4,-2.4 4,-2.3 -5,-0.2 -2,-0.2 0.906 111.8 46.2 -54.4 -47.4 9.0 -0.7 -7.6 27 26 X Y H X>S+ 0 0 56 -4,-2.6 5,-2.8 2,-0.2 6,-0.7 0.859 113.6 49.5 -69.3 -34.6 8.6 -3.6 -5.1 28 27 X A H ><5S+ 0 0 0 -4,-2.2 3,-0.9 -5,-0.2 -2,-0.2 0.933 110.9 50.4 -64.0 -45.2 4.9 -3.9 -6.0 29 28 X K H 3<5S+ 0 0 119 -4,-2.8 -2,-0.2 1,-0.3 -1,-0.2 0.902 113.5 44.8 -62.0 -41.4 5.7 -3.9 -9.7 30 29 X M H 3<5S- 0 0 112 -4,-2.3 -1,-0.3 -5,-0.2 -2,-0.2 0.538 110.6-119.3 -81.1 -5.9 8.3 -6.6 -9.2 31 30 X G T <<5S+ 0 0 43 -3,-0.9 -3,-0.2 -4,-0.6 -2,-0.1 0.803 78.5 123.6 73.7 28.6 6.1 -8.8 -6.9 32 31 X G < + 0 0 26 -5,-2.8 2,-0.3 -6,-0.2 -4,-0.2 0.327 46.0 79.0-108.6 -1.6 8.6 -8.4 -4.1 33 32 X A - 0 0 7 -6,-0.7 54,-0.2 1,-0.1 3,-0.1 -0.833 56.0-159.3-106.0 152.0 6.6 -6.9 -1.3 34 33 X K S S+ 0 0 115 52,-3.4 26,-0.6 1,-0.4 2,-0.3 0.566 82.6 8.6-100.8 -18.9 4.2 -8.9 0.9 35 34 X L E -bC 60 86A 1 51,-1.1 51,-2.8 24,-0.1 2,-0.4 -0.942 62.6-151.8-158.1 140.2 2.2 -5.9 2.0 36 35 X I E -bC 61 85A 0 24,-2.3 26,-2.9 -2,-0.3 2,-0.4 -0.976 12.6-162.5-112.6 134.3 2.0 -2.2 0.9 37 36 X I E -bC 62 84A 0 47,-2.8 47,-2.2 -2,-0.4 2,-0.4 -0.969 6.7-170.4-114.9 129.8 1.0 0.4 3.5 38 37 X V E -bC 63 83A 2 24,-2.3 26,-2.5 -2,-0.4 45,-0.3 -0.961 23.4-119.9-121.7 137.6 -0.2 3.8 2.3 39 38 X A E > -b 64 0A 0 43,-2.8 3,-1.9 -2,-0.4 28,-0.2 -0.445 30.7-112.4 -68.9 153.0 -0.8 6.9 4.5 40 39 X R T 3 S+ 0 0 124 26,-2.1 27,-0.2 24,-0.9 -1,-0.1 0.815 117.2 44.6 -54.9 -35.9 -4.4 8.3 4.3 41 40 X N T 3 S+ 0 0 79 25,-0.4 -1,-0.3 2,-0.0 26,-0.1 0.134 76.6 138.7-105.2 19.5 -3.1 11.4 2.6 42 41 X A S < S- 0 0 5 -3,-1.9 5,-0.1 40,-0.2 -4,-0.0 -0.344 72.4 -85.2 -51.3 140.7 -0.8 9.8 0.1 43 42 X R >> - 0 0 153 1,-0.1 4,-2.3 3,-0.1 3,-0.7 -0.290 40.3-119.2 -53.0 136.7 -1.1 11.7 -3.3 44 43 X P H 3> S+ 0 0 83 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.856 112.3 49.4 -47.1 -49.0 -4.1 10.2 -5.3 45 44 X D H 3> S+ 0 0 74 1,-0.2 4,-2.3 2,-0.2 5,-0.1 0.823 111.0 51.9 -68.0 -29.9 -2.1 9.1 -8.3 46 45 X I H <> S+ 0 0 23 -3,-0.7 4,-2.5 2,-0.2 5,-0.2 0.914 111.3 45.9 -65.2 -51.0 0.5 7.4 -5.9 47 46 X K H X S+ 0 0 40 -4,-2.3 4,-2.8 2,-0.2 5,-0.2 0.918 114.5 49.6 -54.4 -44.6 -2.3 5.4 -4.0 48 47 X E H X S+ 0 0 126 -4,-2.5 4,-2.0 -5,-0.3 -2,-0.2 0.921 111.0 47.6 -71.5 -38.0 -3.8 4.5 -7.4 49 48 X D H X S+ 0 0 68 -4,-2.3 4,-2.8 -5,-0.2 5,-0.3 0.965 114.2 47.3 -61.5 -50.0 -0.5 3.3 -8.8 50 49 X I H X S+ 0 0 0 -4,-2.5 4,-2.6 1,-0.2 5,-0.3 0.932 112.2 49.7 -53.4 -49.0 0.2 1.2 -5.7 51 50 X E H X S+ 0 0 99 -4,-2.8 4,-2.1 -5,-0.2 -1,-0.2 0.885 113.3 47.7 -60.9 -40.5 -3.3 -0.3 -5.7 52 51 X Y H X S+ 0 0 121 -4,-2.0 4,-2.1 -5,-0.2 -2,-0.2 0.957 114.2 42.9 -64.9 -57.4 -2.9 -1.2 -9.4 53 52 X Y H X S+ 0 0 51 -4,-2.8 4,-1.1 2,-0.2 -2,-0.2 0.872 115.2 51.4 -61.0 -37.2 0.5 -2.8 -9.2 54 53 X A H X>S+ 0 0 1 -4,-2.6 5,-2.7 -5,-0.3 4,-1.4 0.913 108.3 51.7 -64.8 -42.2 -0.5 -4.6 -6.0 55 54 X R H <5S+ 0 0 221 -4,-2.1 -2,-0.2 -5,-0.3 -1,-0.2 0.858 103.5 59.2 -61.2 -37.9 -3.6 -5.9 -7.6 56 55 X L H <5S+ 0 0 112 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.837 117.5 30.5 -57.2 -36.5 -1.6 -7.3 -10.5 57 56 X S H <5S- 0 0 63 -4,-1.1 -2,-0.2 -3,-0.5 -1,-0.2 0.520 111.0-109.6-104.6 -7.8 0.5 -9.5 -8.2 58 57 X G T <5 + 0 0 69 -4,-1.4 2,-0.4 1,-0.3 -3,-0.2 0.776 63.2 155.4 79.9 29.9 -2.1 -10.2 -5.5 59 58 X I < - 0 0 21 -5,-2.7 -1,-0.3 -6,-0.2 -24,-0.1 -0.791 43.8-119.0 -94.4 129.4 -0.3 -8.1 -2.9 60 59 X A E -b 35 0A 32 -26,-0.6 -24,-2.3 -2,-0.4 2,-0.4 -0.393 22.2-155.3 -63.7 138.9 -2.4 -6.7 0.0 61 60 X V E -b 36 0A 52 -26,-0.2 2,-0.4 37,-0.1 -24,-0.2 -0.987 7.4-166.3-116.8 128.2 -2.6 -2.9 0.4 62 61 X Y E -b 37 0A 48 -26,-2.9 -24,-2.3 -2,-0.4 2,-0.8 -0.949 13.2-143.3-116.9 130.0 -3.4 -1.4 3.8 63 62 X E E -b 38 0A 100 -2,-0.4 2,-0.3 -26,-0.2 -24,-0.2 -0.845 17.8-139.5 -95.7 110.6 -4.5 2.2 4.3 64 63 X F E -b 39 0A 15 -26,-2.5 2,-2.0 -2,-0.8 -24,-0.9 -0.543 12.9-131.1 -65.5 129.4 -3.0 3.6 7.5 65 64 X E S S+ 0 0 155 -2,-0.3 2,-0.3 -26,-0.1 -1,-0.1 -0.459 80.8 62.2 -85.7 61.9 -5.5 5.8 9.3 66 65 X G S S- 0 0 0 -2,-2.0 -26,-2.1 3,-0.0 -25,-0.4 -0.949 88.3 -82.4-167.9 173.1 -3.1 8.7 9.8 67 66 X T > - 0 0 39 -2,-0.3 4,-2.6 -28,-0.2 5,-0.2 -0.334 41.1-103.5 -82.3 168.7 -1.1 11.1 7.8 68 67 X S H > S+ 0 0 9 2,-0.2 4,-2.2 1,-0.2 13,-1.8 0.774 123.4 57.9 -59.5 -28.8 2.3 10.7 6.2 69 68 X V H > S+ 0 0 85 11,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.970 109.1 42.5 -63.8 -53.9 3.6 12.8 9.2 70 69 X E H > S+ 0 0 91 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.896 114.6 51.0 -59.8 -41.7 2.3 10.3 11.7 71 70 X L H X S+ 0 0 0 -4,-2.6 4,-1.5 2,-0.2 -1,-0.2 0.928 110.0 49.9 -64.5 -45.9 3.4 7.3 9.6 72 71 X G H <>S+ 0 0 0 -4,-2.2 5,-2.5 9,-0.2 3,-0.3 0.914 110.6 50.2 -54.1 -46.7 6.9 8.8 9.3 73 72 X T H ><5S+ 0 0 94 -4,-2.4 3,-1.7 1,-0.2 -2,-0.2 0.901 106.9 54.2 -62.3 -41.8 7.0 9.3 13.1 74 73 X L H 3<5S+ 0 0 58 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.844 108.1 51.1 -58.4 -35.7 6.0 5.7 13.7 75 74 X L T 3<5S- 0 0 2 -4,-1.5 -1,-0.3 -3,-0.3 -2,-0.2 0.242 121.4-107.4 -88.2 7.9 8.9 4.6 11.5 76 75 X G T < 5S+ 0 0 67 -3,-1.7 -3,-0.2 1,-0.2 -2,-0.1 0.478 77.2 132.7 81.9 7.7 11.4 6.8 13.5 77 76 X R < - 0 0 127 -5,-2.5 -1,-0.2 -6,-0.2 -2,-0.1 -0.692 56.4-147.6-101.0 136.5 11.8 9.3 10.7 78 77 X P S S+ 0 0 112 0, 0.0 2,-0.3 0, 0.0 -5,-0.1 0.175 82.5 67.2 -82.4 22.0 11.7 13.1 11.0 79 78 X H S S- 0 0 138 -7,-0.1 -2,-0.1 -11,-0.1 2,-0.1 -0.837 95.0 -83.7-133.7 164.1 10.1 13.4 7.5 80 79 X T - 0 0 88 -2,-0.3 2,-0.4 -8,-0.1 -11,-0.2 -0.377 32.3-163.4 -65.3 149.0 6.8 12.3 5.9 81 80 X V + 0 0 10 -13,-1.8 -9,-0.2 1,-0.1 -10,-0.2 -0.940 9.8 179.2-133.6 114.0 6.4 8.8 4.6 82 81 X S + 0 0 37 -2,-0.4 -43,-2.8 1,-0.2 2,-0.3 0.683 69.4 1.7 -83.8 -25.2 3.5 8.4 2.2 83 82 X A E - C 0 38A 0 -45,-0.3 -63,-3.3 -15,-0.1 2,-0.3 -0.986 57.9-175.9-161.7 151.2 4.0 4.6 1.5 84 83 X L E -AC 19 37A 0 -47,-2.2 -47,-2.8 -2,-0.3 2,-0.4 -0.973 16.9-138.0-147.3 160.1 6.1 1.7 2.6 85 84 X A E -AC 18 36A 0 -67,-2.9 -67,-2.2 -2,-0.3 2,-0.7 -0.987 11.0-139.9-122.9 131.9 6.4 -2.0 1.5 86 85 X V E +AC 17 35A 0 -51,-2.8 -52,-3.4 -2,-0.4 -51,-1.1 -0.823 27.3 168.4 -87.2 114.8 6.9 -4.9 3.9 87 86 X V E S+ 0 0 25 -71,-2.4 -70,-0.2 -2,-0.7 -1,-0.2 0.830 76.3 13.6 -91.2 -45.3 9.4 -7.2 2.2 88 87 X D E -A 16 0A 70 -72,-2.3 -72,-2.5 -77,-0.1 -1,-0.4 -0.987 65.7-153.5-132.0 121.5 10.1 -9.4 5.2 89 88 X P > - 0 0 26 0, 0.0 3,-1.9 0, 0.0 5,-0.3 0.591 27.7-160.0 -69.1 -10.2 7.7 -9.2 8.2 90 89 X G T 3 - 0 0 27 1,-0.3 -75,-0.2 -76,-0.2 -79,-0.1 -0.472 64.5 -30.2 66.6-134.4 10.5 -10.4 10.5 91 90 X E T 3 S+ 0 0 144 -81,-0.3 -1,-0.3 -2,-0.2 -80,-0.1 0.246 115.0 111.9 -94.9 6.9 9.1 -11.8 13.7 92 91 X S < - 0 0 15 -3,-1.9 3,-0.2 -82,-0.1 -85,-0.1 -0.352 68.7-137.5 -82.1 166.0 6.1 -9.4 13.4 93 92 X R > + 0 0 128 1,-0.1 3,-1.7 -90,-0.1 4,-0.3 0.076 65.7 122.3 -99.3 15.2 2.4 -10.0 12.8 94 93 X I G > + 0 0 0 -87,-0.4 3,-1.5 -5,-0.3 -1,-0.1 0.785 62.1 64.4 -56.0 -32.8 2.2 -7.1 10.4 95 94 X L G > S+ 0 0 58 1,-0.3 3,-2.2 -3,-0.2 -1,-0.3 0.719 81.7 78.2 -69.2 -18.1 0.9 -9.2 7.4 96 95 X A G < S+ 0 0 74 -3,-1.7 -1,-0.3 1,-0.3 -2,-0.2 0.795 78.6 73.9 -58.1 -27.2 -2.3 -10.0 9.2 97 96 X L G < 0 0 37 -3,-1.5 -1,-0.3 -4,-0.3 -2,-0.2 0.631 360.0 360.0 -58.8 -16.3 -3.4 -6.5 8.2 98 97 X G < 0 0 77 -3,-2.2 -1,-0.3 -4,-0.1 -2,-0.2 0.628 360.0 360.0 -73.9 360.0 -3.9 -7.9 4.7