==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 25-MAY-04 1WEQ . COMPND 2 MOLECULE: PHD FINGER PROTEIN 7; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7566.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 26 30.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 138 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 151.5 -31.9 -27.8 6.2 2 2 A S - 0 0 130 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.979 360.0-159.9-157.5 164.1 -32.3 -24.0 6.2 3 3 A S + 0 0 125 -2,-0.3 2,-0.0 2,-0.0 0, 0.0 -0.995 33.3 107.0-150.7 150.7 -31.7 -20.9 4.0 4 4 A G - 0 0 76 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 0.036 30.0-168.9 139.6 110.1 -31.3 -17.2 4.4 5 5 A S - 0 0 121 2,-0.0 2,-0.4 -2,-0.0 -2,-0.0 -0.857 9.4-153.2-120.2 155.4 -28.3 -14.9 4.1 6 6 A S + 0 0 114 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.901 41.9 117.4-132.6 104.5 -27.7 -11.2 5.1 7 7 A G + 0 0 59 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.690 24.5 165.6-170.4 112.0 -25.1 -9.2 3.2 8 8 A E - 0 0 161 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.807 13.5-157.5-125.8 167.2 -25.5 -6.1 1.0 9 9 A L - 0 0 146 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.929 25.8-110.4-141.2 164.5 -23.1 -3.5 -0.5 10 10 A E > - 0 0 170 -2,-0.3 3,-0.6 3,-0.1 2,-0.1 -0.809 35.8-155.1-102.6 97.0 -23.2 0.0 -1.8 11 11 A P T 3 S+ 0 0 106 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.364 73.5 14.3 -69.7 147.0 -22.6 -0.1 -5.6 12 12 A G T 3 S+ 0 0 85 1,-0.2 2,-0.6 -2,-0.1 0, 0.0 0.925 82.6 148.6 54.2 49.2 -21.2 3.0 -7.4 13 13 A A < + 0 0 61 -3,-0.6 2,-0.6 2,-0.1 -1,-0.2 -0.720 3.5 148.0-116.8 80.3 -20.1 4.6 -4.1 14 14 A F - 0 0 151 -2,-0.6 2,-0.2 -3,-0.1 3,-0.1 -0.762 38.3-147.1-116.0 84.7 -17.0 6.6 -4.9 15 15 A S - 0 0 101 -2,-0.6 -2,-0.1 1,-0.1 0, 0.0 -0.303 26.8-118.9 -53.2 112.7 -16.9 9.6 -2.6 16 16 A E - 0 0 160 -2,-0.2 2,-0.4 1,-0.1 -1,-0.1 -0.120 26.9-157.9 -53.1 150.6 -15.3 12.4 -4.6 17 17 A L - 0 0 107 1,-0.1 4,-0.1 -3,-0.1 -1,-0.1 -0.913 15.6-168.7-140.6 110.8 -12.0 13.8 -3.2 18 18 A Y S S+ 0 0 220 -2,-0.4 2,-0.2 2,-0.1 -1,-0.1 0.960 78.0 59.8 -60.0 -54.2 -10.7 17.2 -4.2 19 19 A Q S S- 0 0 146 1,-0.1 2,-0.3 3,-0.0 0, 0.0 -0.509 96.7-107.6 -78.7 145.1 -7.3 16.6 -2.6 20 20 A R - 0 0 192 -2,-0.2 2,-0.8 1,-0.1 -1,-0.1 -0.554 30.2-120.8 -75.1 131.4 -5.1 13.8 -3.8 21 21 A Y + 0 0 76 -2,-0.3 -1,-0.1 33,-0.1 -4,-0.0 -0.620 44.9 158.2 -76.4 108.3 -4.8 10.9 -1.4 22 22 A R + 0 0 109 -2,-0.8 2,-0.7 2,-0.1 -1,-0.1 -0.369 19.6 134.9-127.6 53.0 -1.1 10.4 -0.6 23 23 A H - 0 0 106 34,-0.0 33,-0.6 13,-0.0 13,-0.1 -0.895 60.6-118.4-108.4 109.4 -1.2 8.6 2.8 24 24 A C + 0 0 42 -2,-0.7 33,-0.2 1,-0.2 12,-0.1 -0.188 44.6 161.2 -45.9 116.1 1.2 5.7 3.0 25 25 A D + 0 0 95 31,-0.2 -1,-0.2 33,-0.1 32,-0.1 0.124 26.6 130.5-126.5 17.0 -0.9 2.6 3.5 26 26 A A - 0 0 23 30,-0.1 36,-0.2 1,-0.1 3,-0.1 -0.121 68.3-112.7 -67.4 168.5 1.6 -0.1 2.4 27 27 A P S S+ 0 0 95 0, 0.0 2,-0.4 0, 0.0 35,-0.1 0.911 97.6 13.7 -69.8 -44.6 2.3 -3.2 4.5 28 28 A I - 0 0 118 33,-1.1 2,-0.4 32,-0.1 35,-0.3 -0.998 67.7-155.2-138.3 139.7 5.9 -2.2 5.4 29 29 A C + 0 0 48 -2,-0.4 32,-0.0 -3,-0.1 33,-0.0 -0.895 15.7 175.1-115.8 144.2 7.8 1.1 5.1 30 30 A L + 0 0 105 -2,-0.4 2,-0.2 0, 0.0 -1,-0.1 0.650 49.7 107.4-114.5 -30.0 11.6 1.6 4.8 31 31 A Y S > S- 0 0 53 1,-0.2 3,-0.8 2,-0.1 -2,-0.0 -0.348 72.1-134.3 -56.6 115.8 11.8 5.4 4.3 32 32 A E T 3 S+ 0 0 174 1,-0.3 -1,-0.2 -2,-0.2 -3,-0.0 0.843 109.3 48.6 -38.3 -44.0 13.1 6.8 7.6 33 33 A Q T 3 S- 0 0 96 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.893 80.4-174.6 -66.8 -40.9 10.4 9.4 7.3 34 34 A G < + 0 0 37 -3,-0.8 2,-0.2 1,-0.2 -2,-0.1 0.796 44.4 119.4 48.0 30.7 7.7 6.8 6.6 35 35 A R S S- 0 0 129 2,-0.1 2,-1.9 -12,-0.0 -1,-0.2 -0.471 87.6 -74.3-113.4-174.1 5.4 9.7 6.0 36 36 A D S S+ 0 0 49 -2,-0.2 2,-0.4 -3,-0.1 10,-0.1 -0.173 89.9 124.1 -77.0 46.1 3.2 11.0 3.1 37 37 A S + 0 0 47 -2,-1.9 2,-0.3 8,-0.0 -2,-0.1 -0.919 29.5 156.5-113.4 133.9 6.4 12.3 1.4 38 38 A F - 0 0 38 -2,-0.4 7,-0.3 8,-0.1 2,-0.2 -0.968 29.0-127.5-149.6 162.5 7.5 11.3 -2.1 39 39 A E B -a 45 0A 97 5,-2.0 7,-0.5 -2,-0.3 3,-0.2 -0.511 27.6-112.0-106.4 176.4 9.6 12.6 -4.9 40 40 A D S S+ 0 0 140 1,-0.3 2,-0.3 -2,-0.2 5,-0.1 0.822 104.8 17.6 -77.2 -32.8 9.0 13.1 -8.7 41 41 A E S S+ 0 0 169 3,-0.1 -1,-0.3 4,-0.0 2,-0.2 -0.947 99.7 58.4-145.7 120.8 11.3 10.3 -9.7 42 42 A G S > S- 0 0 37 -2,-0.3 3,-1.1 -3,-0.2 -3,-0.1 -0.801 92.1 -64.8 147.6 171.1 12.6 7.4 -7.5 43 43 A R T 3 S+ 0 0 136 1,-0.3 16,-2.1 -2,-0.2 17,-0.7 0.827 126.8 62.0 -55.9 -32.7 11.7 4.5 -5.4 44 44 A W T 3 S+ 0 0 36 14,-0.2 -5,-2.0 15,-0.1 2,-0.5 -0.137 78.5 133.3 -87.2 39.3 10.1 7.0 -2.9 45 45 A R B < -a 39 0A 128 -3,-1.1 2,-0.3 -2,-0.4 12,-0.1 -0.805 66.7-109.9 -96.1 128.2 7.6 8.1 -5.6 46 46 A L - 0 0 58 -7,-0.5 2,-0.5 -2,-0.5 12,-0.2 -0.364 38.7-164.2 -57.4 114.1 4.0 8.4 -4.7 47 47 A I E -B 57 0B 29 10,-2.9 10,-2.1 -2,-0.3 2,-0.4 -0.908 3.5-155.9-108.9 127.2 2.2 5.5 -6.4 48 48 A L E -B 56 0B 63 -2,-0.5 23,-0.4 8,-0.2 8,-0.2 -0.809 31.6 -93.7-102.8 141.0 -1.6 5.5 -6.8 49 49 A C - 0 0 5 6,-1.5 23,-0.3 -2,-0.4 -1,-0.1 0.035 25.4-148.7 -44.4 156.2 -3.6 2.3 -7.3 50 50 A A S S+ 0 0 35 21,-0.6 22,-0.2 3,-0.1 -1,-0.1 0.800 88.4 51.2 -99.1 -40.1 -4.4 1.3 -10.9 51 51 A T S S- 0 0 89 20,-0.1 21,-0.1 1,-0.1 -2,-0.0 0.998 139.0 -4.6 -60.7 -73.5 -7.8 -0.4 -10.4 52 52 A C S S- 0 0 34 21,-0.0 -1,-0.1 0, 0.0 -2,-0.1 0.792 86.8-141.3 -92.3 -34.4 -9.7 2.2 -8.5 53 53 A G + 0 0 34 0, 0.0 -3,-0.1 0, 0.0 -5,-0.1 0.954 65.2 112.6 71.7 51.6 -6.8 4.7 -8.0 54 54 A S + 0 0 43 -34,-0.1 -33,-0.1 -32,-0.0 2,-0.0 0.697 53.7 74.0-118.1 -45.9 -7.6 5.8 -4.5 55 55 A H - 0 0 38 -33,-0.1 -6,-1.5 -30,-0.0 2,-0.3 -0.306 60.3-165.6 -71.0 156.6 -4.7 4.4 -2.3 56 56 A G E +B 48 0B 0 -33,-0.6 2,-0.3 -8,-0.2 -8,-0.2 -0.907 20.2 138.6-151.7 119.8 -1.3 6.0 -2.4 57 57 A T E -B 47 0B 2 -10,-2.1 -10,-2.9 -2,-0.3 -33,-0.1 -0.943 50.0 -76.9-151.0 170.1 2.0 4.8 -1.1 58 58 A H - 0 0 0 -2,-0.3 4,-0.4 -12,-0.2 -14,-0.2 0.130 40.9-116.9 -59.0-177.4 5.7 4.6 -2.0 59 59 A R S > >S+ 0 0 56 -16,-2.1 5,-0.9 2,-0.1 3,-0.6 0.929 110.1 33.1 -89.5 -63.1 7.1 2.1 -4.5 60 60 A D G > 5S+ 0 0 67 -17,-0.7 3,-1.3 1,-0.2 -16,-0.1 0.748 113.5 65.5 -66.1 -23.3 9.5 -0.1 -2.4 61 61 A C G 3 5S+ 0 0 1 -18,-0.3 -33,-1.1 1,-0.3 -1,-0.2 0.867 95.2 55.5 -66.7 -37.3 7.1 0.4 0.5 62 62 A S G < 5S- 0 0 15 -3,-0.6 -1,-0.3 -4,-0.4 -2,-0.2 0.240 118.3-114.5 -80.3 15.0 4.3 -1.5 -1.3 63 63 A S T < 5 + 0 0 100 -3,-1.3 -3,-0.2 -35,-0.3 -2,-0.1 0.936 66.3 150.4 50.5 53.7 6.8 -4.4 -1.6 64 64 A L < - 0 0 46 -5,-0.9 -1,-0.1 1,-0.1 7,-0.0 -0.393 46.1 -93.8-104.8-175.9 6.8 -4.1 -5.4 65 65 A R > - 0 0 199 -2,-0.1 3,-1.3 1,-0.1 -1,-0.1 -0.667 25.2-119.3-101.6 156.9 9.4 -4.8 -8.1 66 66 A P T 3 S+ 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -6,-0.0 0.525 116.5 44.7 -69.7 -4.8 12.0 -2.4 -9.6 67 67 A N T 3 S+ 0 0 152 0, 0.0 2,-0.4 0, 0.0 0, 0.0 -0.150 81.0 137.6-131.5 38.1 10.3 -3.1 -13.0 68 68 A S < - 0 0 54 -3,-1.3 3,-0.1 1,-0.2 -4,-0.0 -0.736 38.2-160.4 -91.0 132.2 6.7 -2.8 -12.1 69 69 A K S S- 0 0 215 -2,-0.4 2,-0.3 1,-0.3 -1,-0.2 0.989 71.1 -6.4 -71.9 -64.5 4.3 -1.0 -14.4 70 70 A K - 0 0 136 -23,-0.0 2,-0.4 2,-0.0 -1,-0.3 -0.929 62.4-144.0-134.0 158.0 1.4 -0.2 -12.1 71 71 A W - 0 0 18 -23,-0.4 -21,-0.6 -2,-0.3 2,-0.4 -0.940 8.1-150.8-124.9 146.4 0.4 -1.1 -8.6 72 72 A E - 0 0 72 -2,-0.4 5,-0.1 -23,-0.3 -23,-0.1 -0.909 23.4-110.3-118.0 144.2 -3.1 -1.8 -7.1 73 73 A C > - 0 0 0 -2,-0.4 4,-2.4 -18,-0.1 -1,-0.1 0.068 35.2-103.0 -58.7 176.9 -4.3 -1.3 -3.5 74 74 A N T 4 S+ 0 0 84 2,-0.2 5,-0.2 1,-0.2 -1,-0.1 0.996 118.4 53.8 -68.0 -66.8 -5.0 -4.2 -1.1 75 75 A E T 4 S+ 0 0 140 1,-0.3 -1,-0.2 3,-0.1 4,-0.1 0.779 116.7 44.6 -38.6 -31.5 -8.8 -4.2 -1.2 76 76 A C T 4 S+ 0 0 38 2,-0.1 -1,-0.3 0, 0.0 -2,-0.2 0.924 100.7 77.1 -81.2 -49.6 -8.2 -4.5 -5.0 77 77 A L S < S- 0 0 73 -4,-2.4 2,-1.7 1,-0.1 -4,-0.0 -0.242 101.2 -94.9 -62.4 149.9 -5.5 -7.1 -5.0 78 78 A P + 0 0 126 0, 0.0 2,-0.8 0, 0.0 -1,-0.1 -0.484 52.6 175.9 -69.8 86.6 -6.4 -10.7 -4.4 79 79 A A - 0 0 54 -2,-1.7 2,-0.3 -5,-0.2 4,-0.1 -0.839 31.6-128.9-100.0 105.8 -5.9 -11.0 -0.7 80 80 A S S S- 0 0 136 -2,-0.8 -1,-0.0 2,-0.0 0, 0.0 -0.325 77.6 -9.3 -54.6 108.9 -6.9 -14.4 0.7 81 81 A G S S- 0 0 51 -2,-0.3 4,-0.1 4,-0.0 2,-0.1 0.117 103.4 -52.2 82.8 159.4 -9.2 -13.5 3.6 82 82 A P - 0 0 104 0, 0.0 -2,-0.0 0, 0.0 -7,-0.0 -0.390 51.8-112.6 -69.8 143.9 -9.9 -10.1 5.3 83 83 A S S S+ 0 0 112 1,-0.2 2,-1.6 -2,-0.1 -3,-0.0 0.881 109.0 71.5 -39.8 -51.7 -7.0 -8.0 6.4 84 84 A S 0 0 105 1,-0.0 -1,-0.2 0, 0.0 -3,-0.0 -0.531 360.0 360.0 -72.9 89.3 -8.1 -8.6 10.0 85 85 A G 0 0 119 -2,-1.6 -2,-0.0 -4,-0.1 -4,-0.0 0.104 360.0 360.0 -53.0 360.0 -7.1 -12.3 10.4