==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 25-MAY-04 1WEW . COMPND 2 MOLECULE: DNA-BINDING FAMILY PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 78 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6812.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 28.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 132 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 160.8 4.5 22.8 33.1 2 2 A S - 0 0 126 2,-0.0 2,-0.2 1,-0.0 0, 0.0 -0.642 360.0-134.8-117.4 175.6 5.1 22.4 29.4 3 3 A S - 0 0 134 -2,-0.2 2,-0.3 2,-0.0 -1,-0.0 -0.687 5.8-153.5-123.9 177.5 3.2 22.9 26.2 4 4 A G - 0 0 76 -2,-0.2 2,-0.5 2,-0.0 -2,-0.0 -0.796 4.2-154.4-160.6 113.2 2.6 21.0 22.9 5 5 A S + 0 0 130 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.765 21.8 169.7 -92.2 128.1 1.7 22.3 19.5 6 6 A S + 0 0 130 -2,-0.5 -2,-0.0 2,-0.0 0, 0.0 -0.996 24.2 99.9-141.4 132.9 -0.1 19.9 17.2 7 7 A G - 0 0 62 -2,-0.4 -1,-0.0 2,-0.0 2,-0.0 0.072 40.7-158.1 150.9 91.9 -1.9 20.5 13.8 8 8 A E - 0 0 152 1,-0.1 -2,-0.0 2,-0.0 4,-0.0 -0.199 32.9 -92.0 -78.5 174.0 -0.5 19.8 10.4 9 9 A D - 0 0 97 1,-0.1 3,-0.3 2,-0.1 -1,-0.1 -0.695 19.8-132.9 -92.1 140.9 -1.6 21.4 7.1 10 10 A P S S+ 0 0 126 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.421 96.4 82.5 -69.7 3.4 -4.3 19.8 5.0 11 11 A F S S+ 0 0 193 2,-0.1 -2,-0.1 0, 0.0 0, 0.0 -0.254 76.4 89.7-102.9 44.2 -2.0 20.4 2.0 12 12 A Q S S- 0 0 81 -3,-0.3 2,-0.6 -2,-0.0 -4,-0.0 -0.984 85.4 -97.0-141.0 150.5 0.1 17.3 2.6 13 13 A P - 0 0 100 0, 0.0 2,-2.7 0, 0.0 -2,-0.1 -0.535 30.6-140.0 -69.8 112.2 -0.0 13.6 1.5 14 14 A E + 0 0 166 -2,-0.6 2,-0.2 -4,-0.1 0, 0.0 -0.404 36.9 174.2 -72.9 70.3 -1.7 11.5 4.2 15 15 A I - 0 0 47 -2,-2.7 25,-0.1 1,-0.1 11,-0.0 -0.535 22.9-168.2 -81.4 146.3 0.8 8.6 3.9 16 16 A K - 0 0 122 23,-0.2 -1,-0.1 -2,-0.2 24,-0.1 0.886 8.0-162.0 -96.4 -60.9 0.7 5.7 6.3 17 17 A V + 0 0 7 1,-0.1 2,-0.6 25,-0.0 25,-0.1 0.961 13.5 176.1 73.9 54.6 3.8 3.7 5.6 18 18 A R + 0 0 119 23,-0.5 49,-0.3 6,-0.1 50,-0.1 -0.092 24.7 154.5 -82.3 37.9 2.8 0.4 7.3 19 19 A C - 0 0 11 -2,-0.6 3,-0.2 4,-0.4 23,-0.1 -0.152 50.5-128.2 -63.0 161.5 6.1 -1.1 6.1 20 20 A V S S+ 0 0 81 1,-0.2 -1,-0.1 23,-0.1 22,-0.0 0.914 100.2 73.8 -78.2 -46.2 7.6 -4.1 8.0 21 21 A C S S- 0 0 73 1,-0.2 -1,-0.2 22,-0.1 3,-0.1 0.780 106.5-123.7 -37.5 -32.4 11.0 -2.6 8.5 22 22 A G + 0 0 61 1,-0.4 -1,-0.2 -3,-0.2 2,-0.1 0.088 67.9 131.8 106.6 -22.5 9.3 -0.4 11.1 23 23 A N - 0 0 83 1,-0.1 -4,-0.4 -5,-0.0 -1,-0.4 -0.397 44.5-158.4 -66.2 137.5 10.3 2.9 9.5 24 24 A S + 0 0 84 -2,-0.1 2,-0.2 -3,-0.1 -1,-0.1 -0.184 53.9 113.1-109.5 38.7 7.5 5.4 9.1 25 25 A L - 0 0 63 -8,-0.1 2,-0.3 0, 0.0 18,-0.1 -0.569 54.2-137.3-105.4 170.8 9.2 7.5 6.4 26 26 A E + 0 0 98 -2,-0.2 2,-0.2 16,-0.0 4,-0.1 -0.942 19.6 175.6-130.4 151.9 8.4 8.0 2.7 27 27 A T - 0 0 83 -2,-0.3 2,-0.8 2,-0.2 0, 0.0 -0.783 50.9 -79.9-140.8-176.2 10.5 8.2 -0.5 28 28 A D S S+ 0 0 169 -2,-0.2 2,-0.2 1,-0.1 -2,-0.0 -0.148 112.8 55.4 -83.6 41.3 10.2 8.5 -4.2 29 29 A S + 0 0 66 -2,-0.8 15,-0.8 2,-0.0 2,-0.3 -0.647 62.6 131.8-175.1 111.8 9.3 4.8 -4.5 30 30 A M E -A 43 0A 30 13,-0.2 2,-0.5 -2,-0.2 13,-0.2 -0.985 40.6-126.8-161.7 155.5 6.6 2.8 -2.8 31 31 A I E -A 42 0A 7 11,-2.0 11,-1.2 -2,-0.3 2,-0.3 -0.929 20.4-141.7-113.5 131.2 3.8 0.3 -3.5 32 32 A Q E -A 41 0A 81 -2,-0.5 32,-0.3 9,-0.2 2,-0.3 -0.663 25.8-108.4 -90.8 144.1 0.2 0.8 -2.5 33 33 A C - 0 0 3 7,-1.4 6,-0.4 -2,-0.3 32,-0.2 -0.529 18.8-133.5 -72.9 130.4 -1.9 -2.1 -1.3 34 34 A E S S+ 0 0 91 30,-1.9 -1,-0.1 -2,-0.3 31,-0.1 0.879 82.3 97.3 -48.7 -43.0 -4.6 -3.3 -3.8 35 35 A D S > S- 0 0 56 29,-0.2 4,-2.0 1,-0.1 5,-0.1 -0.173 72.0-143.5 -51.2 137.4 -7.1 -3.3 -0.9 36 36 A P T 4 S+ 0 0 87 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.946 98.6 42.4 -69.7 -51.1 -9.2 -0.1 -0.8 37 37 A R T 4 S+ 0 0 238 1,-0.1 -2,-0.1 2,-0.0 -4,-0.0 0.914 119.2 45.8 -63.1 -44.4 -9.4 0.2 3.0 38 38 A C T 4 + 0 0 28 1,-0.1 -1,-0.1 2,-0.1 3,-0.1 0.994 64.1 154.1 -62.0 -65.9 -5.8 -0.7 3.4 39 39 A H < + 0 0 95 -4,-2.0 -23,-0.2 -6,-0.4 2,-0.2 0.813 31.0 164.0 36.9 38.9 -4.2 1.5 0.8 40 40 A V - 0 0 14 -5,-0.1 -7,-1.4 -24,-0.1 2,-0.4 -0.507 36.3-122.2 -85.1 154.4 -1.1 1.4 2.9 41 41 A W E -A 32 0A 64 -9,-0.2 -23,-0.5 -2,-0.2 2,-0.4 -0.791 26.7-178.0 -99.8 139.1 2.4 2.3 1.7 42 42 A Q E -A 31 0A 1 -11,-1.2 -11,-2.0 -2,-0.4 4,-0.1 -0.956 32.9-108.5-140.9 118.9 5.3 -0.1 1.7 43 43 A H E >> -A 30 0A 21 -2,-0.4 4,-1.1 -13,-0.2 3,-0.7 0.022 22.5-135.6 -40.1 146.5 8.9 0.7 0.6 44 44 A V H 3> S+ 0 0 39 -15,-0.8 4,-0.9 1,-0.2 2,-0.4 0.933 102.7 48.9 -74.7 -48.7 9.8 -0.9 -2.7 45 45 A G H 34 S+ 0 0 78 -16,-0.2 -1,-0.2 1,-0.2 -2,-0.1 -0.057 109.2 59.1 -83.7 35.9 13.3 -2.1 -1.6 46 46 A C H <4 S+ 0 0 56 -3,-0.7 -1,-0.2 -2,-0.4 -2,-0.2 0.644 119.8 10.3-124.2 -57.9 11.8 -3.6 1.6 47 47 A V H < S+ 0 0 43 -4,-1.1 2,-0.2 2,-0.1 -3,-0.1 0.829 110.3 83.1 -95.0 -41.5 9.2 -6.2 0.8 48 48 A I S < S- 0 0 38 -4,-0.9 12,-0.0 -5,-0.5 -5,-0.0 -0.462 76.9-133.7 -68.4 131.6 9.7 -6.6 -3.0 49 49 A L - 0 0 112 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.1 -0.495 25.2 -96.8 -85.8 155.9 12.6 -8.9 -3.8 50 50 A P - 0 0 119 0, 0.0 2,-0.9 0, 0.0 -1,-0.1 -0.310 26.7-125.9 -69.8 153.0 15.3 -8.2 -6.4 51 51 A D > + 0 0 59 1,-0.2 4,-1.7 2,-0.1 5,-0.0 -0.711 41.5 158.4-103.5 81.7 15.1 -9.4 -9.9 52 52 A K T 4 S+ 0 0 189 -2,-0.9 -1,-0.2 2,-0.2 0, 0.0 0.979 81.6 29.3 -65.2 -58.2 18.4 -11.3 -10.4 53 53 A P T 4 S+ 0 0 113 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.901 130.7 39.5 -69.7 -43.0 17.3 -13.5 -13.4 54 54 A M T 4 S- 0 0 107 -4,-0.1 -2,-0.2 2,-0.1 -3,-0.1 0.909 77.2-177.5 -73.8 -44.0 14.7 -11.0 -14.7 55 55 A D < - 0 0 136 -4,-1.7 2,-0.3 1,-0.1 -3,-0.1 0.884 68.5 -5.2 44.3 47.0 16.9 -7.9 -14.0 56 56 A G S S+ 0 0 35 2,-0.2 -1,-0.1 -5,-0.0 -2,-0.1 -0.960 93.9 66.2 141.3-159.0 14.1 -5.7 -15.3 57 57 A N + 0 0 137 -2,-0.3 3,-0.0 -3,-0.0 0, 0.0 0.082 68.7 69.5 -37.4 148.3 10.6 -6.0 -16.8 58 58 A P S S- 0 0 89 0, 0.0 -2,-0.2 0, 0.0 -4,-0.0 0.509 87.7-140.0 -69.7 153.8 8.1 -7.0 -16.0 59 59 A P - 0 0 107 0, 0.0 3,-0.2 0, 0.0 -3,-0.0 0.035 47.2 -36.9 -69.8-176.9 7.9 -4.0 -13.6 60 60 A L S S- 0 0 107 1,-0.1 2,-0.4 2,-0.1 4,-0.0 0.049 79.9 -88.2 -40.7 150.1 6.5 -4.1 -10.0 61 61 A P - 0 0 52 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 -0.512 27.6-151.2 -69.7 122.4 3.5 -6.4 -9.5 62 62 A E S S+ 0 0 144 -2,-0.4 2,-0.8 1,-0.2 -2,-0.1 0.851 92.2 52.8 -61.0 -35.3 0.2 -4.6 -10.2 63 63 A S S S+ 0 0 77 -30,-0.0 2,-0.3 2,-0.0 -1,-0.2 -0.780 77.0 153.3-106.9 88.8 -1.5 -6.8 -7.7 64 64 A F - 0 0 33 -2,-0.8 -30,-1.9 -32,-0.3 2,-0.4 -0.887 27.4-156.2-117.9 148.3 0.4 -6.7 -4.4 65 65 A Y - 0 0 118 -2,-0.3 -32,-0.1 -32,-0.2 -2,-0.0 -0.985 16.9-128.7-128.0 127.0 -0.7 -7.2 -0.9 66 66 A C > - 0 0 1 -2,-0.4 4,-3.0 1,-0.1 5,-0.2 0.187 40.2 -90.6 -56.2-174.9 1.0 -5.8 2.2 67 67 A E H > S+ 0 0 32 -49,-0.3 4,-0.9 1,-0.2 -1,-0.1 0.777 128.0 54.9 -73.0 -27.1 1.9 -8.0 5.2 68 68 A I H > S+ 0 0 57 2,-0.1 4,-0.6 -50,-0.1 -1,-0.2 0.816 119.4 31.7 -75.1 -31.7 -1.4 -7.4 6.8 69 69 A C H 4 S+ 0 0 18 2,-0.2 3,-0.4 1,-0.1 -2,-0.2 0.899 114.0 56.5 -90.2 -51.6 -3.3 -8.6 3.7 70 70 A R H < S+ 0 0 179 -4,-3.0 -3,-0.2 1,-0.3 -2,-0.1 0.812 111.2 48.7 -50.5 -31.8 -0.9 -11.2 2.4 71 71 A L H < S+ 0 0 103 -4,-0.9 2,-1.3 -5,-0.2 3,-0.5 0.854 95.2 78.5 -77.6 -36.8 -1.2 -12.8 5.8 72 72 A T < + 0 0 91 -4,-0.6 -1,-0.1 -3,-0.4 -4,-0.0 -0.611 57.4 112.0 -77.9 95.2 -5.0 -12.7 5.8 73 73 A S + 0 0 109 -2,-1.3 -1,-0.2 0, 0.0 -2,-0.1 0.602 46.7 85.4-128.9 -51.0 -6.0 -15.6 3.6 74 74 A G S S- 0 0 54 -3,-0.5 -3,-0.0 1,-0.1 0, 0.0 -0.185 72.0-132.3 -58.8 150.1 -7.7 -18.3 5.6 75 75 A P - 0 0 124 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.921 22.7-171.0 -69.8 -46.2 -11.4 -18.0 6.2 76 76 A S + 0 0 119 1,-0.2 2,-1.3 2,-0.1 -2,-0.0 0.881 14.5 175.0 53.0 41.1 -11.3 -18.6 10.0 77 77 A S 0 0 124 1,-0.2 -1,-0.2 0, 0.0 -3,-0.0 -0.653 360.0 360.0 -82.7 94.2 -15.1 -18.8 10.0 78 78 A G 0 0 125 -2,-1.3 -1,-0.2 -3,-0.2 -2,-0.1 0.749 360.0 360.0-117.2 360.0 -15.9 -19.9 13.6