==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 27-MAY-04 1WG6 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN (RIKEN CDNA 2810455B10); . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR F.HE,K.HANAKI,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 127 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9281.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 72 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 22.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 14.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-148.1 -5.7 27.6 -29.1 2 2 A S + 0 0 126 1,-0.2 2,-0.2 0, 0.0 0, 0.0 0.849 360.0 138.2 64.4 109.9 -2.7 29.8 -29.7 3 3 A S + 0 0 136 2,-0.0 2,-0.2 0, 0.0 -1,-0.2 -0.755 10.3 136.2 178.3 132.9 -2.3 32.7 -27.3 4 4 A G - 0 0 69 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.846 29.1-130.8-160.1-166.0 0.5 34.3 -25.4 5 5 A S - 0 0 130 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.958 10.0-161.1-156.4 168.5 2.0 37.6 -24.3 6 6 A S + 0 0 131 -2,-0.3 2,-0.5 0, 0.0 -2,-0.0 -0.953 49.4 44.5-151.3 166.2 5.3 39.6 -24.2 7 7 A G + 0 0 63 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.864 44.3 152.1 103.7-131.1 6.9 42.5 -22.5 8 8 A L - 0 0 130 -2,-0.5 2,-0.4 1,-0.1 -1,-0.2 0.639 30.9-147.1 67.1 130.2 6.6 43.1 -18.8 9 9 A K S S- 0 0 213 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.831 76.0 -1.1-134.2 94.0 9.3 44.9 -16.9 10 10 A G S S- 0 0 74 -2,-0.4 3,-0.3 1,-0.1 -2,-0.0 -0.586 73.9-148.5 131.6 -70.2 9.8 43.7 -13.3 11 11 A E - 0 0 92 -2,-0.2 2,-2.7 1,-0.2 -1,-0.1 0.955 12.5-135.1 63.7 93.2 7.2 41.0 -12.6 12 12 A P S S+ 0 0 137 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 -0.312 82.6 55.6 -75.0 57.5 6.2 41.1 -9.0 13 13 A D S S- 0 0 104 -2,-2.7 3,-0.1 -3,-0.3 -3,-0.1 -0.849 79.6-124.3 178.0 146.7 6.5 37.4 -8.7 14 14 A C S S- 0 0 119 -2,-0.2 2,-0.2 1,-0.2 -1,-0.1 0.985 87.0 -39.9 -62.7 -60.5 9.0 34.6 -9.3 15 15 A Y - 0 0 181 -3,-0.1 2,-0.4 0, 0.0 -1,-0.2 -0.825 53.5-174.7-173.6 131.4 6.7 32.6 -11.6 16 16 A A + 0 0 74 -2,-0.2 3,-0.1 -3,-0.1 -3,-0.0 -0.969 27.9 133.9-137.3 118.2 3.0 31.8 -11.8 17 17 A L S S+ 0 0 154 -2,-0.4 2,-0.4 1,-0.3 -1,-0.1 0.631 75.1 6.9-123.8 -59.8 1.6 29.5 -14.4 18 18 A S S S- 0 0 101 0, 0.0 -1,-0.3 0, 0.0 2,-0.0 -0.999 77.6-110.1-136.3 133.0 -0.8 27.0 -12.8 19 19 A L - 0 0 163 -2,-0.4 2,-0.1 -3,-0.1 -3,-0.0 -0.339 39.4-119.4 -60.3 135.6 -2.0 26.9 -9.2 20 20 A E + 0 0 163 -2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.395 38.5 168.4 -76.7 155.3 -0.5 23.9 -7.3 21 21 A S - 0 0 91 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.954 40.8 -79.7-166.4 148.3 -2.7 21.3 -5.8 22 22 A S - 0 0 55 -2,-0.3 2,-0.3 99,-0.1 99,-0.2 -0.037 48.6-130.1 -47.8 153.3 -2.5 17.8 -4.3 23 23 A E E -A 120 0A 84 97,-1.4 97,-2.0 2,-0.0 2,-0.4 -0.703 13.7-151.2-109.1 161.9 -2.1 14.9 -6.7 24 24 A Q E -A 119 0A 93 -2,-0.3 2,-0.3 95,-0.2 95,-0.2 -0.994 3.4-157.6-136.3 140.9 -4.0 11.7 -7.0 25 25 A L E -A 118 0A 70 93,-1.0 93,-1.3 -2,-0.4 2,-0.5 -0.875 6.0-150.1-117.8 150.2 -3.1 8.3 -8.3 26 26 A T E -A 117 0A 67 -2,-0.3 2,-0.4 91,-0.2 91,-0.2 -0.939 16.0-178.0-124.9 108.3 -5.3 5.5 -9.5 27 27 A L E -A 116 0A 23 89,-1.5 89,-1.9 -2,-0.5 2,-0.5 -0.874 12.9-151.3-107.8 137.7 -4.0 1.9 -9.1 28 28 A E E -A 115 0A 93 -2,-0.4 87,-0.2 87,-0.2 -2,-0.0 -0.940 11.7-174.9-112.5 123.6 -5.9 -1.1 -10.3 29 29 A I E -A 114 0A 7 85,-2.5 85,-2.3 -2,-0.5 2,-0.2 -0.975 20.0-135.1-121.8 121.0 -5.6 -4.4 -8.6 30 30 A P E -A 113 0A 37 0, 0.0 83,-0.3 0, 0.0 4,-0.3 -0.512 10.1-164.1 -75.0 138.2 -7.2 -7.6 -10.0 31 31 A L + 0 0 5 81,-4.3 82,-0.1 -2,-0.2 8,-0.0 -0.371 53.0 115.0-117.2 50.0 -9.0 -9.8 -7.5 32 32 A N S S+ 0 0 114 3,-0.2 4,-0.4 80,-0.1 -1,-0.1 0.961 96.7 6.6 -80.7 -61.4 -9.3 -12.9 -9.7 33 33 A D S S+ 0 0 158 2,-0.1 4,-0.5 -3,-0.1 -2,-0.1 0.782 141.3 44.4 -90.9 -33.8 -7.2 -15.3 -7.7 34 34 A S S >> S+ 0 0 22 -4,-0.3 4,-4.0 1,-0.2 3,-1.4 0.903 99.4 69.7 -76.0 -44.5 -6.6 -12.9 -4.8 35 35 A G T 34 S+ 0 0 18 1,-0.3 -1,-0.2 2,-0.2 -3,-0.2 0.842 85.9 71.6 -39.7 -44.5 -10.3 -11.9 -4.6 36 36 A S T 34 S+ 0 0 113 -4,-0.4 -1,-0.3 1,-0.2 -2,-0.2 0.891 121.8 11.5 -38.1 -58.4 -11.0 -15.4 -3.4 37 37 A A T <4 S- 0 0 106 -3,-1.4 2,-0.3 -4,-0.5 -2,-0.2 0.867 124.4-100.7 -88.9 -45.0 -9.3 -14.5 -0.1 38 38 A G < - 0 0 11 -4,-4.0 -1,-0.3 1,-0.2 -2,-0.1 -0.891 51.5 -43.6 148.3-176.0 -9.1 -10.8 -0.6 39 39 A L - 0 0 6 -2,-0.3 29,-0.6 -4,-0.1 28,-0.4 0.941 65.7-136.0 -45.0 -62.9 -6.7 -8.0 -1.5 40 40 A G + 0 0 49 1,-0.5 23,-0.4 -3,-0.1 2,-0.3 0.516 65.0 106.4 111.7 13.9 -3.9 -9.5 0.6 41 41 A V - 0 0 35 21,-0.1 -1,-0.5 27,-0.0 2,-0.4 -0.878 59.4-134.9-123.1 155.3 -2.8 -6.2 2.2 42 42 A S E -D 61 0B 66 19,-1.3 18,-2.5 -2,-0.3 19,-1.4 -0.872 16.8-162.8-112.3 144.1 -3.2 -4.8 5.6 43 43 A L E -D 59 0B 22 -2,-0.4 2,-0.4 16,-0.3 16,-0.2 -0.795 6.1-145.8-121.2 164.0 -4.2 -1.2 6.5 44 44 A K E -D 58 0B 52 14,-3.0 14,-1.8 -2,-0.3 2,-0.3 -0.993 13.4-130.7-134.0 139.5 -3.9 0.9 9.6 45 45 A G E -D 57 0B 48 -2,-0.4 2,-0.5 12,-0.2 12,-0.2 -0.699 17.2-156.1 -91.3 139.9 -6.3 3.5 11.0 46 46 A N E -D 56 0B 64 10,-1.4 10,-1.0 -2,-0.3 9,-0.6 -0.965 6.1-164.3-119.3 130.6 -4.9 6.9 12.1 47 47 A K E -D 54 0B 137 -2,-0.5 2,-0.5 7,-0.2 7,-0.2 -0.859 7.2-147.8-113.9 148.6 -6.7 9.1 14.6 48 48 A S E >> -D 53 0B 9 5,-1.8 4,-1.8 -2,-0.3 5,-0.6 -0.967 12.8-172.9-120.0 129.9 -6.1 12.8 15.3 49 49 A R T 45S+ 0 0 241 -2,-0.5 -1,-0.1 2,-0.2 5,-0.0 0.733 85.9 66.4 -87.9 -26.9 -6.6 14.4 18.7 50 50 A E T 45S+ 0 0 159 1,-0.2 -1,-0.2 2,-0.0 -2,-0.0 0.793 122.0 19.6 -63.5 -29.1 -6.0 17.9 17.3 51 51 A T T 45S- 0 0 86 2,-0.1 -2,-0.2 0, 0.0 -1,-0.2 0.718 96.6-134.8-108.2 -36.5 -9.2 17.5 15.4 52 52 A G T <5S+ 0 0 49 -4,-1.8 -3,-0.2 1,-0.3 2,-0.2 0.694 71.0 98.0 84.9 22.1 -10.9 14.7 17.3 53 53 A T E S+ 0 0 29 -28,-0.4 3,-1.6 -2,-0.2 4,-0.4 0.891 122.7 47.8 -89.9 -51.1 -1.4 -10.3 -5.7 68 68 A A T >> S+ 0 0 6 -29,-0.6 4,-2.7 1,-0.3 3,-1.7 0.821 91.3 85.4 -59.0 -31.7 -1.2 -6.8 -4.4 69 69 A F H 3> S+ 0 0 88 -6,-0.6 4,-0.5 1,-0.3 -1,-0.3 0.818 80.9 62.5 -36.9 -42.4 2.6 -7.2 -4.6 70 70 A K H X4 S+ 0 0 148 -3,-1.6 3,-0.6 1,-0.3 -1,-0.3 0.928 116.7 27.9 -51.2 -51.0 2.2 -6.1 -8.2 71 71 A D H X4 S+ 0 0 24 -3,-1.7 3,-2.7 -4,-0.4 -1,-0.3 0.589 94.6 100.5 -86.1 -13.0 0.9 -2.7 -7.0 72 72 A G H 3< + 0 0 3 -4,-2.7 -1,-0.2 1,-0.3 -10,-0.2 0.727 52.0 97.0 -43.3 -24.1 2.9 -3.1 -3.9 73 73 A R T << S+ 0 0 156 -3,-0.6 -1,-0.3 -4,-0.5 -2,-0.1 0.759 72.7 80.9 -37.8 -30.0 5.3 -0.8 -5.7 74 74 A L S < S- 0 0 14 -3,-2.7 2,-0.4 1,-0.1 -12,-0.2 0.076 84.8-117.7 -67.5-174.0 3.5 1.8 -3.6 75 75 A R - 0 0 108 1,-0.1 -16,-0.2 -14,-0.1 -14,-0.1 -0.988 25.0-100.7-134.8 143.0 4.3 2.6 0.0 76 76 A M S S+ 0 0 90 -2,-0.4 -16,-0.2 1,-0.2 3,-0.1 0.143 99.5 58.6 -49.1 173.6 2.2 2.2 3.2 77 77 A N + 0 0 98 -18,-4.4 2,-1.2 1,-0.2 -1,-0.2 0.701 69.4 152.8 71.6 19.8 0.6 5.3 4.8 78 78 A D - 0 0 13 -3,-0.1 -19,-0.9 -19,-0.1 -1,-0.2 -0.714 43.4-135.8 -86.7 95.1 -1.2 5.7 1.5 79 79 A Q B -E 58 0B 34 -2,-1.2 2,-1.1 40,-0.3 40,-0.6 -0.234 9.7-136.2 -52.2 132.0 -4.4 7.5 2.5 80 80 A L E +B 118 0A 2 -23,-2.7 -23,-0.3 1,-0.2 9,-0.3 -0.787 27.0 175.0 -97.5 93.4 -7.4 6.0 0.8 81 81 A I E S- 0 0 38 36,-1.9 7,-0.6 -2,-1.1 2,-0.3 0.508 74.5 -23.5 -73.7 -4.2 -9.4 9.0 -0.3 82 82 A A E -BC 117 87A 14 35,-0.8 35,-0.9 5,-0.3 5,-0.3 -0.963 57.6-138.7 178.1-176.0 -11.6 6.4 -2.0 83 83 A V E > S-BC 116 86A 0 3,-1.8 3,-1.8 -2,-0.3 33,-0.2 -0.706 83.3 -8.4-171.9 114.1 -11.8 2.9 -3.3 84 84 A N T 3 S- 0 0 30 31,-1.3 3,-0.1 1,-0.3 32,-0.1 0.712 132.4 -53.8 67.6 20.5 -13.5 1.6 -6.5 85 85 A G T 3 S+ 0 0 65 1,-0.3 2,-0.4 30,-0.2 -1,-0.3 0.277 115.1 123.0 95.6 -8.3 -15.0 5.0 -6.7 86 86 A E E < -C 83 0A 80 -3,-1.8 -3,-1.8 1,-0.1 -1,-0.3 -0.749 61.8-125.2 -90.9 131.0 -16.3 4.8 -3.2 87 87 A T E +C 82 0A 69 -2,-0.4 -5,-0.3 -5,-0.3 -6,-0.1 -0.317 27.5 176.3 -71.3 155.8 -15.3 7.4 -0.7 88 88 A L S > S+ 0 0 3 -7,-0.6 3,-2.5 -8,-0.1 8,-0.2 0.606 72.7 66.8-126.0 -44.2 -13.6 6.5 2.6 89 89 A L T 3 S+ 0 0 67 1,-0.3 -35,-0.1 -9,-0.3 -8,-0.1 0.867 98.1 59.2 -48.5 -40.7 -12.8 9.8 4.2 90 90 A G T 3 S+ 0 0 69 -9,-0.2 -1,-0.3 2,-0.0 2,-0.1 0.762 108.9 54.3 -60.4 -26.0 -16.5 10.3 4.5 91 91 A K S < S- 0 0 56 -3,-2.5 2,-0.1 1,-0.2 -37,-0.1 -0.292 91.1-105.5 -98.0-174.7 -16.6 7.1 6.6 92 92 A S > - 0 0 25 -2,-0.1 4,-2.1 -39,-0.0 5,-0.4 -0.349 39.2 -88.8-103.2-174.6 -14.7 6.1 9.6 93 93 A N H > S+ 0 0 43 3,-0.2 4,-2.2 2,-0.2 5,-0.2 0.951 127.1 37.5 -60.2 -52.2 -11.8 3.7 10.2 94 94 A H H > S+ 0 0 124 2,-0.2 4,-2.6 3,-0.2 5,-0.2 0.999 121.1 42.5 -61.9 -71.9 -14.2 0.8 10.8 95 95 A E H >> S+ 0 0 85 2,-0.2 4,-1.8 1,-0.2 3,-0.8 0.904 116.4 49.6 -38.4 -64.7 -16.8 1.6 8.2 96 96 A A H >X S+ 0 0 2 -4,-2.1 3,-2.3 1,-0.3 4,-1.8 0.924 114.0 43.4 -39.9 -69.4 -14.2 2.6 5.6 97 97 A M H 3X S+ 0 0 68 -4,-2.2 4,-1.2 -5,-0.4 -1,-0.3 0.770 111.6 58.1 -49.4 -28.2 -12.2 -0.6 6.1 98 98 A E H X S+ 0 0 160 -4,-0.8 4,-2.9 2,-0.2 3,-1.0 0.988 111.1 38.3 -64.8 -62.4 -17.1 -5.0 0.5 103 103 A S H 3X>S+ 0 0 13 -4,-3.4 4,-2.7 1,-0.3 5,-1.2 0.793 112.8 61.7 -59.0 -28.8 -16.0 -3.5 -2.8 104 104 A M H 3<5S+ 0 0 25 -4,-3.4 -1,-0.3 -5,-0.4 -2,-0.2 0.843 116.2 29.4 -66.0 -35.2 -13.4 -6.2 -2.9 105 105 A S H <<5S+ 0 0 90 -4,-1.4 -2,-0.2 -3,-1.0 -1,-0.2 0.646 127.4 46.2 -96.4 -21.2 -16.1 -8.8 -2.9 106 106 A M H >X5S+ 0 0 112 -4,-2.9 4,-1.7 -5,-0.2 3,-0.5 0.941 124.5 27.5 -84.3 -57.7 -18.6 -6.6 -4.7 107 107 A E H 3X>S+ 0 0 53 -4,-2.7 4,-2.4 1,-0.2 5,-2.4 0.880 119.7 57.0 -72.0 -40.1 -16.5 -5.2 -7.5 108 108 A G H 34