==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER BIOSYNTHETIC PROTEIN 28-MAY-04 1WI8 . COMPND 2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 4B; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SUZUKI,Y.MUTO,T.NAGATA,M.INOUE,T.KIGAWA,T.TERADA, . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8224.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 21.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 81 A G 0 0 135 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 156.6 -19.9 -21.9 2.1 2 82 A S - 0 0 120 2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.914 360.0-129.1-155.8 123.9 -17.8 -19.2 0.5 3 83 A S - 0 0 126 -2,-0.3 2,-0.3 1,-0.0 0, 0.0 -0.030 22.0-153.3 -63.0 172.5 -16.8 -18.6 -3.1 4 84 A G + 0 0 73 2,-0.0 2,-0.3 0, 0.0 -1,-0.0 -0.910 26.5 138.9-157.6 126.0 -13.2 -18.0 -4.2 5 85 A S + 0 0 126 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.907 9.1 147.8-167.7 136.8 -11.6 -16.2 -7.1 6 86 A S + 0 0 124 -2,-0.3 -2,-0.0 2,-0.0 2,-0.0 -0.947 4.2 146.5-169.8 149.0 -8.6 -13.9 -7.7 7 87 A G - 0 0 58 -2,-0.3 2,-0.2 2,-0.0 -1,-0.0 -0.179 16.1-178.6 169.5 89.1 -6.0 -13.1 -10.3 8 88 A S - 0 0 69 -2,-0.0 2,-0.7 1,-0.0 83,-0.1 -0.590 24.8-129.5 -97.1 160.0 -4.5 -9.7 -10.9 9 89 A R - 0 0 217 -2,-0.2 3,-0.1 81,-0.1 -2,-0.0 -0.875 25.4-131.0-114.0 100.0 -1.9 -8.7 -13.5 10 90 A L - 0 0 86 -2,-0.7 2,-1.2 1,-0.2 82,-0.1 -0.041 35.4 -94.2 -45.3 145.8 1.0 -6.8 -12.1 11 91 A P - 0 0 28 0, 0.0 -1,-0.2 0, 0.0 80,-0.0 -0.517 30.9-158.9 -69.7 95.3 1.9 -3.5 -13.9 12 92 A K S S+ 0 0 176 -2,-1.2 -2,-0.1 -3,-0.1 55,-0.1 0.761 81.8 58.7 -45.4 -26.1 4.6 -4.7 -16.4 13 93 A S S S- 0 0 78 2,-0.1 -1,-0.0 -3,-0.0 0, 0.0 -0.915 95.1 -80.1-113.5 133.9 5.5 -1.0 -16.4 14 94 A P S S+ 0 0 78 0, 0.0 2,-0.2 0, 0.0 51,-0.1 -0.132 87.7 68.6 -69.7 168.9 6.5 1.0 -13.3 15 95 A P - 0 0 40 0, 0.0 2,-0.6 0, 0.0 50,-0.1 0.598 68.1-145.3 -69.7 178.2 6.0 2.5 -11.0 16 96 A Y E -A 64 0A 15 48,-1.2 48,-1.0 -2,-0.2 2,-0.4 -0.873 15.0-169.9-117.1 99.0 4.7 -0.5 -8.9 17 97 A T E -A 63 0A 22 -2,-0.6 74,-1.9 74,-0.4 2,-0.4 -0.749 8.1-152.5 -91.2 129.9 1.9 0.5 -6.5 18 98 A A E -AB 62 90A 0 44,-1.8 44,-0.9 -2,-0.4 2,-0.5 -0.819 4.2-143.8-104.0 141.0 0.9 -2.1 -3.9 19 99 A F E -AB 61 89A 67 70,-3.1 70,-2.6 -2,-0.4 2,-0.4 -0.891 15.1-167.8-107.0 129.4 -2.6 -2.4 -2.4 20 100 A L E -AB 60 88A 3 40,-2.1 40,-1.0 -2,-0.5 2,-0.3 -0.892 4.7-174.4-116.7 145.9 -3.0 -3.4 1.2 21 101 A G E + B 0 87A 14 66,-1.5 66,-1.3 -2,-0.4 38,-0.1 -0.891 57.0 32.6-135.2 165.7 -6.2 -4.3 3.0 22 102 A N S S+ 0 0 111 -2,-0.3 -1,-0.2 36,-0.2 37,-0.1 0.948 74.8 177.7 54.5 53.9 -7.5 -5.2 6.5 23 103 A L - 0 0 31 35,-1.0 -1,-0.2 -3,-0.2 62,-0.1 -0.681 24.0-121.7 -91.8 142.4 -5.0 -2.8 8.2 24 104 A P - 0 0 7 0, 0.0 -1,-0.1 0, 0.0 32,-0.1 0.003 21.2-112.4 -69.7-179.4 -5.0 -2.3 12.0 25 105 A Y S S+ 0 0 175 1,-0.2 31,-0.1 30,-0.0 -2,-0.0 0.478 114.7 56.2 -94.8 -5.1 -5.4 1.0 13.8 26 106 A D S S+ 0 0 100 2,-0.1 2,-0.3 5,-0.0 -1,-0.2 0.574 72.3 123.9 -99.7 -14.4 -1.8 1.0 15.0 27 107 A V - 0 0 5 54,-0.1 2,-0.2 4,-0.1 -4,-0.0 -0.294 43.2-176.8 -52.4 108.0 -0.3 0.7 11.6 28 108 A T > - 0 0 60 -2,-0.3 4,-1.4 1,-0.1 3,-0.4 -0.553 42.8 -98.4-105.5 172.2 2.0 3.8 11.4 29 109 A E H > S+ 0 0 119 1,-0.3 4,-1.2 2,-0.2 3,-0.2 0.874 126.3 51.1 -56.0 -39.3 4.2 5.2 8.6 30 110 A E H > S+ 0 0 145 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.827 101.5 62.3 -68.0 -32.2 7.2 3.4 10.2 31 111 A S H > S+ 0 0 10 -3,-0.4 4,-2.3 1,-0.2 -1,-0.2 0.884 101.9 50.8 -60.8 -39.9 5.3 0.2 10.3 32 112 A I H X S+ 0 0 8 -4,-1.4 4,-1.7 -3,-0.2 -1,-0.2 0.870 107.3 54.0 -66.1 -37.6 5.0 0.2 6.5 33 113 A K H < S+ 0 0 118 -4,-1.2 -2,-0.2 1,-0.2 -1,-0.2 0.929 114.4 39.5 -62.7 -46.9 8.8 0.8 6.2 34 114 A E H >< S+ 0 0 135 -4,-2.1 3,-1.5 1,-0.2 -2,-0.2 0.847 109.9 61.0 -71.6 -34.9 9.6 -2.3 8.3 35 115 A F H 3< S+ 0 0 30 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.866 114.6 34.7 -59.8 -37.4 6.8 -4.3 6.8 36 116 A F T >< S+ 0 0 5 -4,-1.7 3,-2.1 -5,-0.1 -1,-0.3 0.133 89.7 155.2-103.1 17.9 8.5 -4.0 3.4 37 117 A R T < + 0 0 210 -3,-1.5 3,-0.1 1,-0.2 -3,-0.1 -0.071 62.3 28.1 -45.8 143.3 12.0 -4.0 4.8 38 118 A G T 3 S+ 0 0 66 1,-0.3 -1,-0.2 0, 0.0 -4,-0.1 -0.120 104.6 93.0 94.2 -38.0 14.6 -5.2 2.4 39 119 A L S < S- 0 0 41 -3,-2.1 2,-0.7 30,-0.1 -1,-0.3 -0.099 86.1 -98.9 -78.6-177.8 12.7 -4.0 -0.6 40 120 A N - 0 0 85 26,-0.1 25,-1.3 -3,-0.1 2,-0.4 -0.888 40.3-176.0-111.4 104.0 13.1 -0.6 -2.3 41 121 A I E -C 64 0A 51 -2,-0.7 23,-0.2 23,-0.2 3,-0.1 -0.819 16.9-177.1-102.0 137.5 10.4 1.9 -1.3 42 122 A S E S- 0 0 80 21,-2.3 2,-0.3 -2,-0.4 22,-0.1 0.726 71.1 -17.2 -99.9 -30.1 10.1 5.4 -2.9 43 123 A A E -C 63 0A 51 20,-0.8 20,-2.8 2,-0.0 2,-0.5 -0.955 57.9-123.0-172.0 154.6 7.2 6.7 -0.7 44 124 A V E -C 62 0A 36 -2,-0.3 2,-0.6 18,-0.2 18,-0.2 -0.932 18.5-152.3-112.7 125.7 4.4 5.6 1.6 45 125 A R E +C 61 0A 180 16,-2.9 16,-1.9 -2,-0.5 -2,-0.0 -0.852 21.1 166.6 -99.7 119.1 0.8 6.4 0.9 46 126 A L - 0 0 30 -2,-0.6 14,-0.1 14,-0.2 2,-0.1 -0.744 16.7-162.7-134.8 86.6 -1.5 6.7 3.9 47 127 A P - 0 0 32 0, 0.0 10,-1.7 0, 0.0 2,-0.3 -0.406 7.9-150.1 -69.7 141.7 -4.8 8.4 3.2 48 128 A R B -D 56 0B 95 8,-0.2 8,-0.2 1,-0.1 6,-0.1 -0.886 30.2 -84.6-116.4 146.7 -6.9 9.7 6.1 49 129 A E - 0 0 83 6,-1.3 -1,-0.1 3,-0.6 6,-0.1 -0.001 36.8-119.4 -43.6 147.9 -10.6 10.0 6.4 50 130 A P S S+ 0 0 122 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.548 112.8 26.4 -69.8 -6.6 -12.1 13.2 4.9 51 131 A S S S+ 0 0 97 1,-0.2 3,-0.1 4,-0.1 -2,-0.1 0.684 123.8 44.1-120.4 -50.5 -13.4 14.1 8.4 52 132 A N > + 0 0 66 1,-0.2 3,-0.9 3,-0.1 -3,-0.6 -0.825 55.5 175.9-106.6 96.3 -11.1 12.3 10.9 53 133 A P T 3 S+ 0 0 86 0, 0.0 -1,-0.2 0, 0.0 4,-0.1 0.699 80.4 63.1 -69.8 -19.8 -7.4 12.8 9.9 54 134 A E T 3 S+ 0 0 166 -3,-0.1 2,-0.4 -6,-0.1 -2,-0.0 0.707 96.5 69.9 -77.6 -20.8 -6.3 11.1 13.1 55 135 A R S < S- 0 0 145 -3,-0.9 -6,-1.3 -6,-0.1 2,-0.1 -0.802 87.8-117.8-102.0 140.7 -8.0 7.9 11.9 56 136 A L B -D 48 0B 36 -2,-0.4 -8,-0.2 -8,-0.2 -2,-0.1 -0.439 15.2-131.4 -74.8 147.6 -6.8 5.7 9.0 57 137 A K - 0 0 92 -10,-1.7 -1,-0.1 2,-0.2 -9,-0.1 0.979 46.8-104.4 -61.7 -59.1 -9.0 5.3 6.0 58 138 A G S S+ 0 0 38 1,-0.5 -35,-1.0 -11,-0.3 2,-0.3 0.122 90.4 68.3 155.4 -25.8 -8.7 1.5 5.8 59 139 A F - 0 0 78 -12,-0.1 -1,-0.5 -38,-0.1 2,-0.4 -0.909 59.2-154.9-122.1 149.2 -6.3 0.8 2.9 60 140 A G E -A 20 0A 1 -40,-1.0 -40,-2.1 -2,-0.3 2,-0.3 -0.956 5.7-167.6-126.6 143.9 -2.6 1.4 2.5 61 141 A Y E -AC 19 45A 60 -16,-1.9 -16,-2.9 -2,-0.4 2,-0.4 -0.960 0.7-168.2-130.0 147.3 -0.4 1.9 -0.6 62 142 A A E -AC 18 44A 0 -44,-0.9 -44,-1.8 -2,-0.3 2,-0.4 -0.993 18.1-130.5-136.7 142.3 3.3 1.9 -1.1 63 143 A E E -AC 17 43A 48 -20,-2.8 -21,-2.3 -2,-0.4 -20,-0.8 -0.760 26.2-171.7 -94.2 134.4 5.5 3.0 -4.1 64 144 A F E -AC 16 41A 1 -48,-1.0 -48,-1.2 -2,-0.4 -23,-0.2 -0.823 21.8-162.1-122.3 162.0 8.3 0.6 -5.3 65 145 A E S S+ 0 0 110 -25,-1.3 2,-0.2 -2,-0.3 -1,-0.1 0.785 75.4 52.9-107.6 -48.7 11.1 0.9 -7.7 66 146 A D S >> S- 0 0 73 -26,-0.3 4,-0.7 1,-0.1 3,-0.6 -0.616 76.1-131.0 -92.0 151.8 12.1 -2.7 -8.5 67 147 A L H >> S+ 0 0 89 1,-0.2 4,-1.9 -2,-0.2 3,-0.5 0.848 106.4 64.5 -67.9 -34.6 9.7 -5.4 -9.6 68 148 A D H 3> S+ 0 0 113 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.805 93.3 64.2 -58.5 -29.6 11.1 -7.8 -7.0 69 149 A S H <> S+ 0 0 3 -3,-0.6 4,-1.5 1,-0.2 -1,-0.2 0.927 104.7 43.0 -60.6 -47.0 9.7 -5.4 -4.4 70 150 A L H < S+ 0 0 56 -4,-2.3 3,-0.6 1,-0.2 4,-0.4 0.824 106.2 62.6 -66.9 -31.6 7.8 -9.9 -2.1 73 153 A A H >< S+ 0 0 0 -4,-1.5 3,-1.8 1,-0.2 -1,-0.2 0.878 96.0 58.3 -61.2 -39.1 5.0 -7.7 -1.1 74 154 A L H >< S+ 0 0 61 -4,-1.7 3,-1.6 -3,-0.3 14,-0.3 0.804 95.6 64.5 -61.4 -29.2 2.4 -10.3 -2.2 75 155 A S G XX S+ 0 0 82 -4,-0.7 3,-0.6 -3,-0.6 4,-0.6 0.668 92.9 63.4 -68.4 -15.9 4.0 -12.7 0.2 76 156 A L G <4 + 0 0 28 -3,-1.8 10,-0.3 -4,-0.4 -1,-0.3 0.183 69.0 104.6 -93.2 16.3 2.9 -10.4 3.0 77 157 A N G <4 S+ 0 0 67 -3,-1.6 -1,-0.2 10,-0.2 -2,-0.1 0.703 98.7 20.8 -68.8 -19.2 -0.8 -11.1 2.0 78 158 A E T <4 S+ 0 0 121 -3,-0.6 -1,-0.2 -4,-0.1 -2,-0.2 0.651 90.2 122.4-117.3 -33.1 -1.0 -13.4 5.1 79 159 A E < - 0 0 90 -4,-0.6 7,-1.1 1,-0.1 2,-0.7 -0.041 68.4-121.7 -37.1 120.2 1.9 -12.1 7.2 80 160 A S E -E 85 0C 84 5,-0.2 2,-0.7 2,-0.1 5,-0.3 -0.603 25.3-156.7 -75.0 111.7 0.4 -11.1 10.6 81 161 A L E > -E 84 0C 16 3,-1.8 3,-1.9 -2,-0.7 2,-1.2 -0.809 60.3 -45.0 -94.6 112.4 1.2 -7.4 11.1 82 162 A G T 3 S- 0 0 69 -2,-0.7 -2,-0.1 1,-0.3 3,-0.1 -0.555 126.6 -21.4 73.0 -97.1 1.0 -6.5 14.8 83 163 A N T 3 S+ 0 0 123 -2,-1.2 2,-0.3 2,-0.0 -1,-0.3 0.306 131.8 50.9-127.3 2.0 -2.2 -8.1 16.0 84 164 A K E < S-E 81 0C 78 -3,-1.9 -3,-1.8 -5,-0.1 2,-0.4 -0.899 76.7-115.7-137.4 166.1 -4.0 -8.5 12.7 85 165 A R E -E 80 0C 182 -5,-0.3 2,-0.3 -2,-0.3 -5,-0.2 -0.842 24.3-157.9-107.4 142.0 -3.3 -9.9 9.2 86 166 A I - 0 0 3 -7,-1.1 2,-0.4 -2,-0.4 -64,-0.2 -0.848 9.7-133.9-117.9 154.4 -3.2 -7.8 6.0 87 167 A R E -B 21 0A 174 -66,-1.3 -66,-1.5 -2,-0.3 2,-0.5 -0.865 11.4-150.3-109.6 141.2 -3.6 -8.7 2.3 88 168 A V E +B 20 0A 8 -2,-0.4 2,-0.3 -14,-0.3 -68,-0.2 -0.941 24.4 161.0-114.3 125.6 -1.4 -7.6 -0.5 89 169 A D E -B 19 0A 64 -70,-2.6 -70,-3.1 -2,-0.5 2,-0.4 -0.918 46.2 -84.0-137.9 163.3 -2.7 -7.1 -4.1 90 170 A V E -B 18 0A 25 -2,-0.3 2,-0.4 -72,-0.2 -72,-0.2 -0.532 43.7-147.9 -71.3 124.8 -1.7 -5.4 -7.3 91 171 A A - 0 0 11 -74,-1.9 -74,-0.4 -2,-0.4 2,-0.2 -0.754 15.8-116.1 -97.0 140.6 -2.8 -1.7 -7.3 92 172 A D - 0 0 140 -2,-0.4 2,-2.1 1,-0.1 -82,-0.0 -0.535 30.9-110.1 -75.7 136.2 -3.8 0.1 -10.5 93 173 A Q + 0 0 72 -2,-0.2 2,-0.9 -78,-0.1 -1,-0.1 -0.436 45.6 180.0 -67.4 82.6 -1.6 3.0 -11.5 94 174 A A + 0 0 75 -2,-2.1 2,-0.3 2,-0.0 -1,-0.1 -0.782 5.4 172.8 -92.3 105.9 -4.2 5.8 -10.7 95 175 A Q - 0 0 132 -2,-0.9 2,-0.3 2,-0.0 -2,-0.0 -0.764 9.9-178.0-111.9 158.4 -2.6 9.2 -11.5 96 176 A D - 0 0 135 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.954 6.3-163.6-157.9 135.1 -4.2 12.6 -11.6 97 177 A K - 0 0 193 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.875 7.3-171.8-120.9 153.8 -2.9 16.1 -12.4 98 178 A D - 0 0 135 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.806 6.3-151.2-135.1 175.8 -4.3 19.6 -11.6 99 179 A S - 0 0 124 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.975 3.5-160.1-148.5 159.7 -3.7 23.2 -12.5 100 180 A G - 0 0 64 -2,-0.3 -2,-0.0 1,-0.0 0, 0.0 -1.000 18.7-118.6-147.0 146.5 -4.1 26.7 -11.0 101 181 A P - 0 0 135 0, 0.0 2,-0.2 0, 0.0 -1,-0.0 0.031 24.8-164.4 -69.8-177.3 -4.3 30.3 -12.2 102 182 A S + 0 0 125 2,-0.0 2,-0.3 0, 0.0 -2,-0.0 -0.805 8.4 177.7-175.0 129.9 -1.9 33.1 -11.3 103 183 A S 0 0 130 -2,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.882 360.0 360.0-134.2 165.4 -1.9 36.9 -11.5 104 184 A G 0 0 123 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.983 360.0 360.0 159.2 360.0 0.3 39.8 -10.5