==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 28-MAY-04 1WIE . COMPND 2 MOLECULE: RIM BINDING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.INOUE,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7366.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 42.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 16.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 123 0, 0.0 14,-0.1 0, 0.0 15,-0.0 0.000 360.0 360.0 360.0-168.5 -2.4 -9.7 15.2 2 2 A S + 0 0 97 2,-0.0 13,-0.1 1,-0.0 0, 0.0 0.975 360.0 176.2 54.7 85.5 1.2 -8.9 14.5 3 3 A S - 0 0 120 1,-0.2 2,-0.3 0, 0.0 12,-0.0 0.933 20.3-163.6 -82.4 -53.5 2.9 -12.2 15.0 4 4 A G + 0 0 31 1,-0.0 2,-3.1 0, 0.0 -1,-0.2 -0.698 54.0 98.7 103.9-156.6 6.4 -11.2 14.0 5 5 A S - 0 0 124 -2,-0.3 -1,-0.0 2,-0.1 0, 0.0 -0.394 63.4-166.5 71.8 -68.7 9.4 -13.4 13.1 6 6 A S + 0 0 113 -2,-3.1 3,-0.1 2,-0.1 -1,-0.0 0.283 27.1 163.2 66.3 159.6 8.7 -13.0 9.4 7 7 A G - 0 0 78 1,-0.0 2,-0.3 0, 0.0 -2,-0.1 0.094 60.4 -11.5-171.5 -55.2 10.3 -15.1 6.7 8 8 A T S S- 0 0 115 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 -0.969 82.2 -74.2-164.1 150.3 8.5 -14.9 3.4 9 9 A S + 0 0 68 -2,-0.3 3,-0.1 1,-0.2 0, 0.0 -0.287 52.3 170.7 -51.1 105.2 5.3 -13.5 1.9 10 10 A K - 0 0 192 -2,-0.3 2,-0.4 1,-0.3 -1,-0.2 0.962 62.5 -2.8 -82.2 -68.2 2.8 -16.1 3.1 11 11 A Q > - 0 0 135 1,-0.0 4,-1.0 0, 0.0 3,-0.5 -0.989 52.5-144.8-132.4 139.4 -0.5 -14.6 2.2 12 12 A R T 4 S+ 0 0 71 -2,-0.4 39,-0.2 1,-0.2 -3,-0.0 -0.239 96.6 53.0 -93.7 43.6 -1.3 -11.3 0.6 13 13 A Y T 4 S+ 0 0 125 -2,-0.3 -1,-0.2 37,-0.1 3,-0.1 -0.059 116.7 21.4-170.5 50.2 -4.5 -10.9 2.6 14 14 A S T 4 S+ 0 0 105 -3,-0.5 -2,-0.1 1,-0.3 3,-0.1 0.096 91.9 104.4 174.1 -33.7 -3.7 -11.3 6.3 15 15 A G S < S- 0 0 30 -4,-1.0 37,-0.3 1,-0.1 -1,-0.3 -0.061 88.7 -53.2 -62.9 169.2 -0.0 -10.6 6.7 16 16 A K - 0 0 112 35,-0.2 36,-3.5 1,-0.1 2,-0.3 0.059 61.7-134.4 -40.1 154.4 1.3 -7.3 8.2 17 17 A V E -A 51 0A 56 34,-0.3 2,-0.4 -3,-0.1 34,-0.3 -0.865 8.6-145.1-119.1 153.2 -0.1 -4.2 6.5 18 18 A H E -A 50 0A 66 32,-2.6 32,-3.0 -2,-0.3 2,-0.6 -0.944 11.1-135.2-120.7 140.4 1.7 -1.1 5.3 19 19 A L E +A 49 0A 39 -2,-0.4 61,-0.4 61,-0.3 2,-0.3 -0.849 29.6 176.7 -97.7 118.4 0.4 2.5 5.4 20 20 A C E -A 48 0A 0 28,-2.3 28,-2.3 -2,-0.6 2,-0.5 -0.820 23.4-139.8-118.8 158.9 1.0 4.4 2.2 21 21 A V E -AB 47 78A 27 57,-1.8 57,-0.8 -2,-0.3 26,-0.3 -0.945 32.4-110.1-124.5 108.8 0.0 7.9 1.1 22 22 A A E - B 0 77A 3 24,-1.1 23,-2.7 -2,-0.5 55,-0.3 -0.030 25.5-161.8 -35.9 123.4 -1.1 8.3 -2.5 23 23 A R S S+ 0 0 139 53,-2.9 2,-0.3 1,-0.3 54,-0.2 0.755 77.2 17.4 -83.5 -27.7 1.7 10.3 -4.1 24 24 A Y S S- 0 0 108 52,-0.9 -1,-0.3 20,-0.0 18,-0.1 -0.946 92.5-100.2-150.8 125.0 -0.5 11.3 -7.0 25 25 A S - 0 0 93 -2,-0.3 2,-0.3 -3,-0.2 18,-0.3 -0.159 50.2-175.6 -44.2 121.2 -4.3 11.2 -7.4 26 26 A Y - 0 0 49 16,-3.5 -1,-0.1 50,-0.1 -4,-0.0 -0.921 18.5-170.7-126.9 152.0 -5.0 8.1 -9.4 27 27 A N > - 0 0 76 -2,-0.3 3,-0.8 14,-0.2 4,-0.1 -0.912 11.1-174.5-146.8 113.9 -8.2 6.6 -10.8 28 28 A P G > S+ 0 0 2 0, 0.0 3,-1.1 0, 0.0 5,-0.3 0.797 89.8 60.1 -75.0 -30.5 -8.5 3.2 -12.3 29 29 A F G 3 S+ 0 0 139 1,-0.2 8,-0.0 7,-0.2 5,-0.0 -0.031 89.1 76.3 -87.2 31.0 -12.1 3.8 -13.4 30 30 A D G < S+ 0 0 130 -3,-0.8 -1,-0.2 6,-0.0 -4,-0.0 0.518 93.4 50.1-113.0 -15.7 -10.9 6.7 -15.5 31 31 A G S < S- 0 0 41 -3,-1.1 0, 0.0 -4,-0.1 0, 0.0 -0.486 101.6 -89.8-113.7-175.4 -9.5 4.6 -18.3 32 32 A P S S+ 0 0 132 0, 0.0 -3,-0.1 0, 0.0 -1,-0.0 0.458 71.8 147.4 -75.0 -0.7 -10.7 1.7 -20.5 33 33 A N - 0 0 75 -5,-0.3 4,-0.1 1,-0.2 -2,-0.1 -0.099 41.5-156.0 -39.7 118.7 -9.2 -0.6 -17.9 34 34 A E S S+ 0 0 196 1,-0.3 -1,-0.2 2,-0.1 3,-0.1 0.512 92.9 44.5 -78.9 -5.5 -11.5 -3.6 -17.9 35 35 A N > + 0 0 91 -7,-0.1 4,-0.7 1,-0.1 -1,-0.3 -0.457 66.0 136.7-136.9 60.6 -10.4 -4.2 -14.4 36 36 A P T 4 S+ 0 0 14 0, 0.0 3,-0.5 0, 0.0 -7,-0.2 0.827 71.3 61.2 -75.0 -34.0 -10.6 -0.8 -12.7 37 37 A E T 4 S+ 0 0 143 1,-0.2 -2,-0.1 -9,-0.1 -8,-0.1 0.790 93.7 66.7 -62.0 -28.6 -12.2 -2.2 -9.6 38 38 A A T 4 S+ 0 0 27 32,-0.1 33,-3.2 -3,-0.1 -1,-0.2 0.930 103.8 47.9 -57.5 -48.5 -9.1 -4.4 -9.1 39 39 A E B < S-e 71 0B 18 -4,-0.7 33,-0.2 -3,-0.5 30,-0.0 -0.053 88.3-117.4 -81.2-172.5 -7.1 -1.3 -8.4 40 40 A L - 0 0 3 31,-0.8 2,-1.3 30,-0.2 -3,-0.1 -0.990 20.8-112.6-134.6 141.5 -7.9 1.6 -6.1 41 41 A P - 0 0 30 0, 0.0 -14,-0.2 0, 0.0 2,-0.1 -0.586 39.0-154.8 -75.0 94.1 -8.5 5.3 -6.7 42 42 A L - 0 0 0 -2,-1.3 -16,-3.5 -18,-0.1 2,-0.5 -0.393 4.3-156.0 -69.8 146.6 -5.4 6.8 -5.1 43 43 A T > - 0 0 56 -18,-0.3 3,-3.6 -2,-0.1 -21,-0.2 -0.910 27.2-111.9-131.5 104.3 -5.7 10.4 -3.9 44 44 A A T 3 S+ 0 0 54 -2,-0.5 -21,-0.2 1,-0.3 -22,-0.1 -0.012 108.5 15.0 -33.8 117.0 -2.6 12.4 -3.5 45 45 A G T 3 S+ 0 0 41 -23,-2.7 -1,-0.3 1,-0.4 -22,-0.1 -0.266 103.1 110.6 105.5 -43.7 -2.3 12.9 0.2 46 46 A K < - 0 0 72 -3,-3.6 -24,-1.1 -25,-0.1 -1,-0.4 -0.088 59.9-135.4 -58.9 163.9 -4.8 10.2 1.1 47 47 A Y E -A 21 0A 106 -26,-0.3 18,-0.6 -3,-0.1 2,-0.3 -0.805 19.4-175.5-123.1 164.4 -3.6 7.0 2.8 48 48 A L E -AC 20 64A 2 -28,-2.3 -28,-2.3 -2,-0.3 2,-0.6 -0.969 25.7-120.2-153.8 162.7 -4.3 3.3 2.4 49 49 A Y E -AC 19 63A 93 14,-0.9 14,-1.0 -2,-0.3 2,-0.7 -0.922 22.7-167.9-115.3 107.8 -3.4 0.0 4.0 50 50 A V E -AC 18 62A 0 -32,-3.0 -32,-2.6 -2,-0.6 12,-0.3 -0.852 14.3-145.9 -98.0 113.9 -1.6 -2.4 1.7 51 51 A Y E -AC 17 61A 56 10,-1.2 10,-0.5 -2,-0.7 2,-0.3 -0.549 63.3 -11.5 -80.0 142.1 -1.5 -5.9 3.3 52 52 A G S S- 0 0 12 -36,-3.5 2,-0.2 -37,-0.3 -40,-0.1 -0.559 97.4 -76.9 75.2-130.9 1.6 -8.1 2.6 53 53 A D S S- 0 0 69 1,-0.3 8,-0.3 -2,-0.3 6,-0.1 -0.768 76.3 -13.2-149.8-167.2 3.9 -6.8 -0.1 54 54 A M - 0 0 76 -2,-0.2 -1,-0.3 6,-0.1 6,-0.2 0.041 68.6-127.7 -37.5 142.7 4.3 -6.5 -3.8 55 55 A D - 0 0 27 4,-1.3 -1,-0.1 -3,-0.1 5,-0.0 -0.368 27.2 -96.7 -91.7 174.1 1.9 -8.6 -5.7 56 56 A E S S+ 0 0 170 1,-0.2 -1,-0.1 2,-0.1 -2,-0.1 0.774 131.3 42.6 -60.7 -26.7 2.6 -11.2 -8.5 57 57 A D S S- 0 0 100 2,-0.1 -1,-0.2 0, 0.0 -3,-0.1 0.775 126.9-101.3 -88.2 -31.6 1.8 -8.4 -10.9 58 58 A G S S+ 0 0 34 1,-0.3 16,-0.5 -5,-0.1 2,-0.3 0.699 79.7 119.9 112.6 36.9 3.7 -5.8 -8.9 59 59 A F - 0 0 53 14,-0.1 -4,-1.3 -6,-0.1 2,-0.5 -0.817 58.9-117.4-126.6 166.5 0.9 -3.9 -7.1 60 60 A Y - 0 0 12 12,-3.4 2,-2.8 -2,-0.3 10,-0.1 -0.919 16.1-135.0-110.3 128.3 -0.1 -3.3 -3.5 61 61 A E E -C 51 0A 35 -10,-0.5 -10,-1.2 -2,-0.5 10,-0.2 -0.307 40.4-178.7 -75.3 56.9 -3.4 -4.5 -2.1 62 62 A G E -C 50 0A 0 -2,-2.8 8,-1.7 -12,-0.3 2,-0.7 -0.290 21.2-142.6 -60.7 141.9 -4.0 -1.2 -0.5 63 63 A E E -CD 49 69A 28 -14,-1.0 -14,-0.9 6,-0.2 6,-0.2 -0.868 18.2-132.4-113.2 97.3 -7.2 -0.9 1.5 64 64 A L E > -C 48 0A 6 4,-2.5 3,-2.3 -2,-0.7 -16,-0.2 0.033 24.9-110.8 -41.5 153.1 -8.8 2.5 1.1 65 65 A L T 3 S+ 0 0 83 -18,-0.6 -1,-0.2 1,-0.3 -17,-0.1 0.684 122.9 60.8 -63.3 -17.3 -9.8 4.2 4.3 66 66 A D T 3 S- 0 0 124 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.579 128.8-101.0 -84.3 -11.8 -13.3 3.5 3.1 67 67 A G < + 0 0 37 -3,-2.3 2,-0.2 1,-0.3 -2,-0.2 0.326 69.9 155.3 106.7 -3.1 -12.5 -0.2 3.1 68 68 A Q - 0 0 94 -5,-0.1 -4,-2.5 1,-0.1 2,-0.5 -0.400 27.0-159.1 -60.8 123.2 -11.9 -0.3 -0.6 69 69 A R B +D 63 0A 133 -6,-0.2 2,-0.3 -2,-0.2 -6,-0.2 -0.939 34.6 109.8-112.4 121.9 -9.7 -3.3 -1.4 70 70 A G - 0 0 10 -8,-1.7 -31,-0.3 -2,-0.5 -8,-0.2 -0.950 64.8 -56.1-168.7-177.8 -7.7 -3.4 -4.6 71 71 A L B -e 39 0B 30 -33,-3.2 -31,-0.8 -2,-0.3 -10,-0.2 -0.242 44.1-166.3 -70.7 163.3 -4.3 -3.1 -6.3 72 72 A V - 0 0 0 -33,-0.2 -12,-3.4 -31,-0.0 2,-0.3 -0.906 19.4-126.0-158.1 125.1 -2.1 -0.1 -5.8 73 73 A P > - 0 0 13 0, 0.0 3,-2.0 0, 0.0 4,-0.2 -0.558 9.4-145.8 -75.0 130.5 1.0 1.1 -7.7 74 74 A S T 3 S+ 0 0 49 -16,-0.5 3,-0.2 -2,-0.3 5,-0.1 0.547 100.3 67.7 -70.5 -6.6 4.0 1.7 -5.5 75 75 A N T 3 S+ 0 0 121 1,-0.2 -1,-0.3 3,-0.1 3,-0.0 0.446 106.8 38.3 -90.4 -3.0 4.8 4.4 -8.0 76 76 A F S < S+ 0 0 60 -3,-2.0 -53,-2.9 -53,-0.1 -52,-0.9 0.218 109.1 72.4-128.0 8.7 1.7 6.3 -6.8 77 77 A V E -B 22 0A 7 -55,-0.3 2,-0.5 -54,-0.2 -55,-0.2 -0.966 60.4-155.3-129.2 144.6 2.0 5.5 -3.1 78 78 A D E -B 21 0A 73 -57,-0.8 -57,-1.8 -2,-0.4 2,-1.2 -0.939 27.2-123.7-124.0 107.4 4.4 6.8 -0.4 79 79 A F - 0 0 78 -2,-0.5 -59,-0.3 -59,-0.3 -60,-0.0 -0.247 39.3-160.1 -50.2 88.3 4.9 4.5 2.6 80 80 A V - 0 0 43 -2,-1.2 2,-0.4 -61,-0.4 -61,-0.3 -0.183 2.5-143.1 -69.1 166.6 3.9 7.1 5.1 81 81 A Q - 0 0 114 1,-0.2 3,-0.2 -61,-0.0 -1,-0.0 -1.000 11.9-150.9-139.1 135.2 4.9 6.8 8.8 82 82 A D S S- 0 0 149 -2,-0.4 2,-0.2 1,-0.2 -1,-0.2 0.993 89.8 -16.9 -63.9 -64.8 3.1 7.7 12.0 83 83 A N - 0 0 101 1,-0.2 -1,-0.2 0, 0.0 0, 0.0 -0.700 60.3-171.0-149.0 89.2 6.1 8.4 14.1 84 84 A E + 0 0 137 -3,-0.2 3,-0.3 -2,-0.2 -1,-0.2 0.929 67.8 89.1 -42.1 -66.0 9.4 7.2 12.8 85 85 A S + 0 0 114 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.125 49.3 124.6 -40.6 106.8 11.3 8.1 16.0 86 86 A R + 0 0 204 1,-0.5 -1,-0.2 0, 0.0 2,-0.2 0.539 61.0 36.6-133.6 -55.2 10.8 4.9 17.9 87 87 A L S S- 0 0 161 -3,-0.3 -1,-0.5 1,-0.1 3,-0.0 -0.536 80.1-114.0-102.0 170.2 14.2 3.5 19.0 88 88 A A - 0 0 103 -2,-0.2 -1,-0.1 -3,-0.1 -3,-0.0 0.466 59.5-122.9 -81.0 -2.2 17.3 5.3 20.2 89 89 A S - 0 0 93 1,-0.0 3,-0.1 3,-0.0 -4,-0.0 0.627 31.8-168.9 64.8 132.7 18.9 3.9 17.0 90 90 A T + 0 0 149 1,-0.3 2,-0.3 2,-0.0 -1,-0.0 0.651 68.6 43.8-119.4 -38.1 22.0 1.8 17.2 91 91 A S S S- 0 0 98 1,-0.0 -1,-0.3 0, 0.0 0, 0.0 -0.799 70.8-143.9-112.9 155.1 23.2 1.6 13.7 92 92 A G - 0 0 56 -2,-0.3 -2,-0.0 1,-0.2 -3,-0.0 -0.530 27.6 -85.4-109.6 177.6 23.4 4.2 11.0 93 93 A P - 0 0 139 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 -0.116 40.9-118.6 -75.1 176.7 22.9 4.3 7.2 94 94 A S - 0 0 109 2,-0.1 2,-0.1 1,-0.0 0, 0.0 -0.788 30.0 -90.9-117.7 161.5 25.4 3.5 4.6 95 95 A S 0 0 121 -2,-0.3 -1,-0.0 0, 0.0 0, 0.0 -0.454 360.0 360.0 -71.7 141.0 27.1 5.5 1.8 96 96 A G 0 0 125 -2,-0.1 -2,-0.1 0, 0.0 0, 0.0 -0.294 360.0 360.0 136.5 360.0 25.3 5.4 -1.6