==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WJ5 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN (RIKEN CDNA 0610009H20); . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR R.HATTA,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL . 120 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9005.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 4.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 32.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 128 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -99.6 -27.1 16.6 12.5 2 2 A S - 0 0 137 1,-0.1 2,-0.5 2,-0.0 0, 0.0 0.159 360.0 -84.5 64.5 170.4 -24.2 18.9 13.3 3 3 A S - 0 0 118 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.963 44.8-172.0-118.8 119.1 -22.1 20.7 10.7 4 4 A G + 0 0 75 -2,-0.5 -2,-0.0 1,-0.1 0, 0.0 -0.549 20.0 160.4-103.5 170.0 -19.2 18.9 9.1 5 5 A S - 0 0 114 -2,-0.2 -1,-0.1 0, 0.0 3,-0.1 0.324 25.7-153.9-149.7 -59.6 -16.4 20.1 6.8 6 6 A S + 0 0 128 1,-0.1 2,-0.0 0, 0.0 -2,-0.0 0.864 62.9 1.7 69.1 106.1 -13.4 17.8 6.8 7 7 A G - 0 0 60 2,-0.1 -1,-0.1 1,-0.0 0, 0.0 -0.228 56.4-152.8 82.1-174.9 -10.2 19.5 5.9 8 8 A N S S- 0 0 138 2,-0.1 2,-0.1 -3,-0.1 -1,-0.0 0.190 77.5 -1.0-160.1 -58.6 -9.7 23.2 5.1 9 9 A K S S+ 0 0 181 1,-0.0 2,-0.3 0, 0.0 -2,-0.1 -0.561 90.6 110.6-151.0 77.6 -6.7 23.8 2.8 10 10 A D - 0 0 125 -2,-0.1 2,-1.8 3,-0.0 3,-0.1 -0.818 46.3-157.7-156.8 110.0 -5.0 20.6 1.8 11 11 A N - 0 0 144 -2,-0.3 5,-0.0 1,-0.2 0, 0.0 -0.442 59.7 -91.5 -86.5 61.9 -5.0 19.1 -1.6 12 12 A L - 0 0 93 -2,-1.8 2,-0.3 1,-0.1 -1,-0.2 0.191 48.0-134.9 51.8 177.3 -4.1 15.6 -0.3 13 13 A D >> - 0 0 62 43,-0.1 4,-4.3 -3,-0.1 5,-0.7 -0.972 28.3 -95.8-164.0 154.9 -0.5 14.5 -0.1 14 14 A L H >5S+ 0 0 50 -2,-0.3 4,-1.4 1,-0.3 -1,-0.1 0.841 133.2 37.8 -40.8 -40.7 1.7 11.6 -0.8 15 15 A A H >5S+ 0 0 65 2,-0.2 4,-3.7 3,-0.2 -1,-0.3 0.911 117.0 50.4 -78.2 -46.3 1.1 10.7 2.8 16 16 A G H >5S+ 0 0 24 1,-0.2 4,-0.9 2,-0.2 -2,-0.2 0.938 117.8 38.7 -56.1 -52.2 -2.5 11.8 2.8 17 17 A L H X5S+ 0 0 3 -4,-4.3 4,-2.1 2,-0.2 3,-0.4 0.878 116.2 54.7 -66.2 -39.1 -3.3 9.8 -0.3 18 18 A T H XX S+ 0 0 86 -4,-0.9 4,-2.0 -3,-0.4 3,-0.9 0.963 104.0 58.2 -71.1 -54.7 -5.8 5.7 2.1 21 21 A L H 3X S+ 0 0 0 -4,-2.1 4,-2.0 1,-0.3 -2,-0.2 0.859 99.0 63.8 -41.6 -43.7 -4.0 3.3 -0.2 22 22 A S H >X S+ 0 0 0 -4,-2.5 4,-2.6 1,-0.3 3,-0.8 0.929 105.3 42.0 -46.5 -56.7 -3.2 1.4 3.0 23 23 A E H S+ 0 0 0 -4,-2.0 4,-2.2 1,-0.3 5,-1.2 0.935 107.5 47.8 -59.6 -48.8 -6.8 -8.8 1.4 30 30 A Q H <5S+ 0 0 87 -4,-1.4 -1,-0.3 1,-0.2 -2,-0.2 0.639 114.4 50.8 -66.7 -14.0 -10.4 -9.2 2.6 31 31 A E H <5S+ 0 0 142 -4,-0.9 -2,-0.2 -3,-0.5 -1,-0.2 0.860 116.9 35.1 -89.2 -43.8 -11.3 -9.3 -1.1 32 32 A K H <5S- 0 0 111 -4,-3.1 -2,-0.2 -5,-0.1 -3,-0.2 0.609 104.3-133.7 -84.2 -14.4 -8.8 -12.0 -2.2 33 33 A K T <5 + 0 0 159 -4,-2.2 2,-0.3 -5,-0.3 -3,-0.2 0.985 51.4 148.5 57.8 63.8 -9.2 -13.7 1.1 34 34 A M < - 0 0 48 -5,-1.2 -1,-0.2 1,-0.1 3,-0.1 -0.837 49.0-156.3-126.2 163.6 -5.6 -14.2 1.8 35 35 A Q S S+ 0 0 103 -2,-0.3 71,-0.3 1,-0.3 2,-0.3 0.248 83.1 27.4-119.6 6.5 -3.3 -14.3 4.9 36 36 A S + 0 0 67 69,-0.2 2,-0.3 -7,-0.1 -1,-0.3 -0.953 64.4 134.5-166.4 148.1 -0.1 -13.4 3.1 37 37 A F B -A 104 0A 10 67,-1.0 67,-2.8 -2,-0.3 2,-0.4 -0.964 40.3 -98.9-175.8-176.7 1.0 -11.4 0.1 38 38 A Y > - 0 0 92 -2,-0.3 4,-0.9 65,-0.2 3,-0.4 -0.954 23.0-125.6-128.3 146.6 3.5 -8.9 -1.3 39 39 A Q H >> S+ 0 0 26 63,-0.4 4,-1.2 -2,-0.4 3,-1.0 0.879 115.3 53.9 -52.9 -41.9 3.2 -5.2 -2.0 40 40 A Q H 3> S+ 0 0 111 1,-0.3 4,-0.7 2,-0.2 3,-0.3 0.877 99.7 60.7 -60.7 -39.7 4.3 -5.8 -5.5 41 41 A E H 34 S+ 0 0 112 -3,-0.4 -1,-0.3 1,-0.3 -2,-0.2 0.745 109.7 43.3 -59.3 -23.8 1.5 -8.4 -5.9 42 42 A L H X< S+ 0 0 1 -3,-1.0 3,-1.9 -4,-0.9 7,-0.4 0.664 96.6 74.9 -93.2 -21.9 -0.8 -5.5 -5.2 43 43 A E H 3< S+ 0 0 24 -4,-1.2 -2,-0.2 -3,-0.3 -1,-0.2 0.684 94.2 55.0 -63.0 -17.7 1.1 -3.1 -7.5 44 44 A T T 3< S+ 0 0 109 -4,-0.7 2,-1.3 -3,-0.1 -1,-0.3 0.532 82.2 100.5 -91.0 -9.7 -0.5 -5.1 -10.3 45 45 A V X> - 0 0 22 -3,-1.9 4,-2.7 1,-0.2 3,-2.5 -0.661 58.2-165.3 -81.2 94.7 -4.0 -4.4 -8.8 46 46 A E H 3> S+ 0 0 159 -2,-1.3 4,-4.2 1,-0.3 5,-0.3 0.902 88.7 61.7 -43.4 -53.3 -5.1 -1.5 -11.0 47 47 A S H 34 S+ 0 0 101 1,-0.2 -1,-0.3 2,-0.2 4,-0.1 0.795 115.0 36.2 -44.6 -32.0 -7.9 -0.8 -8.5 48 48 A L H X> S+ 0 0 5 -3,-2.5 3,-3.7 -6,-0.3 4,-2.4 0.933 114.5 51.7 -86.1 -58.3 -5.0 -0.1 -6.2 49 49 A Q H 3X S+ 0 0 48 -4,-2.7 4,-2.3 -7,-0.4 5,-0.4 0.867 98.1 68.7 -45.2 -43.8 -2.5 1.5 -8.6 50 50 A S H 3< S+ 0 0 80 -4,-4.2 -1,-0.3 -5,-0.3 -2,-0.2 0.749 113.2 31.7 -48.4 -24.7 -5.2 3.8 -9.6 51 51 A L H <4 S+ 0 0 20 -3,-3.7 3,-0.5 -5,-0.3 -2,-0.3 0.827 117.0 52.2 -99.0 -47.4 -4.8 5.2 -6.1 52 52 A A H < S+ 0 0 1 -4,-2.4 27,-0.3 1,-0.3 -2,-0.2 0.553 119.7 41.4 -66.6 -6.1 -1.1 4.5 -5.6 53 53 A S S < S+ 0 0 59 -4,-2.3 -1,-0.3 -5,-0.4 -2,-0.2 0.527 89.1 121.6-113.7 -16.7 -0.8 6.4 -8.9 54 54 A R S S- 0 0 143 -3,-0.5 -3,-0.1 -5,-0.4 -37,-0.0 0.048 70.2 -94.9 -45.0 158.9 -3.3 9.1 -8.1 55 55 A P + 0 0 106 0, 0.0 2,-0.2 0, 0.0 -42,-0.1 -0.203 48.2 163.7 -74.9 169.8 -2.1 12.7 -8.2 56 56 A V - 0 0 38 2,-0.1 -43,-0.1 -44,-0.1 -44,-0.1 -0.554 56.5 -51.5-153.4-142.1 -0.9 14.7 -5.2 57 57 A T S S+ 0 0 81 -2,-0.2 2,-0.2 2,-0.0 -45,-0.1 -0.309 85.0 131.1-108.8 46.1 1.0 17.8 -4.4 58 58 A H + 0 0 89 2,-0.0 -2,-0.1 1,-0.0 0, 0.0 -0.558 23.6 163.8 -96.4 162.8 4.0 17.0 -6.6 59 59 A S + 0 0 113 -2,-0.2 2,-0.2 3,-0.0 -1,-0.0 -0.087 40.3 99.7-175.2 57.1 5.7 19.3 -9.1 60 60 A T S S- 0 0 119 0, 0.0 2,-1.0 0, 0.0 3,-0.1 -0.757 80.7 -88.2-137.4-177.4 9.1 18.0 -10.1 61 61 A G S S- 0 0 59 1,-0.3 0, 0.0 -2,-0.2 0, 0.0 -0.536 75.2 -88.6 -97.5 65.6 10.9 16.1 -12.8 62 62 A S - 0 0 81 -2,-1.0 -1,-0.3 1,-0.1 -3,-0.0 0.135 40.0 -99.4 54.7-179.3 10.4 12.6 -11.4 63 63 A D - 0 0 56 -3,-0.1 3,-0.1 2,-0.1 -1,-0.1 0.845 35.8-171.8 -99.8 -54.2 12.8 11.1 -8.9 64 64 A Q + 0 0 145 1,-0.2 2,-0.4 6,-0.1 -2,-0.0 0.952 36.8 135.8 56.5 54.7 14.9 8.8 -11.1 65 65 A V S S- 0 0 84 1,-0.1 -1,-0.2 0, 0.0 3,-0.1 -0.990 75.2 -20.2-137.7 125.9 16.7 7.3 -8.2 66 66 A E S S+ 0 0 197 -2,-0.4 2,-0.4 1,-0.2 -1,-0.1 0.872 102.9 130.9 44.1 45.7 17.4 3.6 -7.7 67 67 A L - 0 0 49 2,-0.1 2,-0.6 -4,-0.0 -1,-0.2 -0.990 50.8-157.2-131.4 138.3 14.7 2.9 -10.2 68 68 A K + 0 0 205 -2,-0.4 2,-0.3 -3,-0.1 -2,-0.0 -0.669 69.5 44.9-114.1 73.5 14.7 0.6 -13.2 69 69 A D - 0 0 117 -2,-0.6 -2,-0.1 1,-0.1 3,-0.1 -0.941 59.2-141.6-179.2-165.5 12.0 2.1 -15.4 70 70 A S + 0 0 103 -2,-0.3 3,-0.2 1,-0.2 4,-0.2 0.330 65.7 84.9-142.9 -74.4 10.5 5.3 -16.8 71 71 A G S S- 0 0 48 1,-0.2 3,-0.5 2,-0.1 -1,-0.2 0.042 100.9 -69.8 -39.7 147.9 6.7 5.5 -17.0 72 72 A T S S+ 0 0 110 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 -0.158 97.2 99.3 -46.1 128.6 5.0 6.6 -13.8 73 73 A S >> + 0 0 34 -3,-0.2 4,-1.9 -4,-0.1 3,-0.9 0.035 58.7 73.5-175.6 -54.8 5.3 3.8 -11.2 74 74 A G H >> S+ 0 0 3 -3,-0.5 4,-1.2 1,-0.3 3,-0.6 0.911 95.3 57.2 -42.6 -58.1 8.1 4.5 -8.8 75 75 A V H >> S+ 0 0 48 1,-0.3 4,-1.3 2,-0.2 3,-1.2 0.870 106.7 50.8 -41.4 -46.3 6.2 7.2 -7.0 76 76 A A H X> S+ 0 0 1 -3,-0.9 4,-4.0 1,-0.3 3,-0.5 0.908 99.5 63.0 -59.5 -44.0 3.5 4.5 -6.5 77 77 A Q H X S+ 0 0 87 -4,-1.8 4,-1.1 1,-0.2 3,-0.6 0.931 105.7 50.4 -46.2 -58.1 3.7 0.3 6.6 86 86 A L H >X S+ 0 0 45 -4,-2.8 3,-1.9 1,-0.3 4,-1.7 0.911 107.0 55.1 -46.9 -50.7 0.6 2.2 7.8 87 87 A L H 3X>S+ 0 0 0 -4,-2.2 4,-2.9 1,-0.3 5,-2.4 0.887 105.3 52.5 -50.3 -43.3 -1.2 -1.2 7.9 88 88 A Q H <<5S+ 0 0 51 -4,-2.2 -1,-0.3 -3,-0.6 -2,-0.2 0.696 109.3 50.9 -66.4 -19.2 1.6 -2.4 10.2 89 89 A E H <<5S+ 0 0 160 -3,-1.9 -1,-0.3 -4,-1.1 -2,-0.2 0.703 114.0 42.2 -88.9 -24.2 0.9 0.7 12.3 90 90 A K H <5S- 0 0 103 -4,-1.7 -2,-0.2 -3,-0.4 -3,-0.2 0.741 115.8-112.6 -90.9 -29.0 -2.8 -0.1 12.4 91 91 A G T <5S+ 0 0 46 -4,-2.9 -3,-0.2 -5,-0.3 -4,-0.1 0.545 85.1 117.9 105.0 14.3 -2.3 -3.8 13.0 92 92 A L S