==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-MAY-04 1WJK . COMPND 2 MOLECULE: C330018D20RIK PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.SATO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7580.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 7.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 16 16.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 18.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 127 0, 0.0 2,-0.4 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 -64.5 17.5 -8.2 4.9 2 2 A S - 0 0 103 1,-0.1 3,-0.1 0, 0.0 0, 0.0 -0.982 360.0-148.3-137.7 123.0 19.0 -4.8 4.9 3 3 A S - 0 0 133 -2,-0.4 -1,-0.1 1,-0.1 0, 0.0 0.709 48.4-145.4 -58.6 -19.7 19.1 -2.5 7.9 4 4 A G - 0 0 48 1,-0.1 2,-0.3 -3,-0.0 -1,-0.1 0.138 6.4-126.1 72.0 166.7 18.9 0.3 5.3 5 5 A S + 0 0 127 -3,-0.1 -1,-0.1 1,-0.0 2,-0.1 -0.861 48.7 122.3-156.4 115.8 20.6 3.7 5.5 6 6 A S + 0 0 125 -2,-0.3 2,-0.4 2,-0.0 -1,-0.0 -0.455 23.6 170.8-177.3 95.4 19.0 7.1 5.1 7 7 A G + 0 0 67 -2,-0.1 2,-0.3 0, 0.0 -2,-0.0 -0.903 8.9 149.3-116.3 143.4 19.1 9.8 7.7 8 8 A N - 0 0 152 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.969 51.0 -75.8-165.5 155.9 18.0 13.4 7.4 9 9 A L + 0 0 168 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.246 58.3 140.6 -57.0 142.9 16.6 16.2 9.5 10 10 A S - 0 0 95 2,-0.0 -1,-0.2 0, 0.0 3,-0.1 0.364 32.0-162.0-147.9 -56.7 13.0 15.9 10.3 11 11 A A + 0 0 97 1,-0.2 2,-0.3 0, 0.0 -2,-0.1 0.992 50.0 111.5 56.7 71.5 12.2 16.9 13.9 12 12 A S S S- 0 0 95 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.969 72.3 -77.9-166.8 156.4 8.8 15.2 14.2 13 13 A N - 0 0 150 -2,-0.3 2,-0.6 1,-0.1 0, 0.0 0.016 50.4-108.9 -52.4 166.6 7.1 12.4 16.0 14 14 A R + 0 0 230 2,-0.0 2,-0.2 0, 0.0 -1,-0.1 -0.922 63.6 118.2-109.3 116.5 7.6 8.9 14.8 15 15 A A - 0 0 78 -2,-0.6 -2,-0.0 2,-0.0 0, 0.0 -0.656 39.7-154.3-178.2 116.8 4.7 7.1 13.1 16 16 A L - 0 0 85 -2,-0.2 28,-0.2 1,-0.1 2,-0.1 -0.616 29.8-101.0 -96.6 157.7 4.4 5.8 9.6 17 17 A P - 0 0 16 0, 0.0 28,-2.7 0, 0.0 2,-0.7 -0.340 31.4-116.1 -75.0 157.9 1.1 5.4 7.6 18 18 A V E -a 45 0A 57 26,-0.2 55,-1.3 -2,-0.1 2,-0.8 -0.866 24.6-158.9-100.3 110.9 -0.6 2.0 7.2 19 19 A L E -aB 46 72A 0 26,-1.7 28,-4.0 -2,-0.7 2,-1.1 -0.812 10.1-145.1 -93.2 111.5 -0.7 0.9 3.6 20 20 A T E -aB 47 71A 15 51,-2.6 51,-1.3 -2,-0.8 2,-0.6 -0.664 17.6-167.0 -79.9 102.0 -3.4 -1.7 3.1 21 21 A L E -aB 48 70A 0 26,-2.7 28,-4.4 -2,-1.1 2,-0.7 -0.823 4.5-163.9 -95.1 121.4 -2.1 -4.1 0.6 22 22 A F E +aB 49 69A 0 47,-1.8 47,-0.8 -2,-0.6 2,-0.2 -0.864 17.1 172.1-109.6 98.7 -4.6 -6.4 -0.9 23 23 A T E +a 50 0A 16 26,-1.0 28,-1.4 -2,-0.7 29,-0.5 -0.588 3.1 172.1-101.7 165.3 -3.0 -9.3 -2.7 24 24 A K - 0 0 27 3,-0.2 3,-0.3 -2,-0.2 6,-0.1 -0.896 22.0 -75.9-156.5-178.4 -4.5 -12.4 -4.2 25 25 A A S S+ 0 0 69 1,-0.3 2,-0.1 -2,-0.3 -2,-0.0 -0.975 98.7 27.0-160.6 149.4 -3.8 -15.5 -6.3 26 26 A P S S+ 0 0 122 0, 0.0 -1,-0.3 0, 0.0 3,-0.0 0.350 93.8 122.5 -75.0 133.9 -3.3 -16.6 -8.8 27 27 A C > - 0 0 33 -3,-0.3 4,-0.7 -2,-0.1 -3,-0.2 -0.726 40.9-170.0-162.4 104.6 -2.1 -13.1 -9.5 28 28 A P H > S+ 0 0 102 0, 0.0 4,-1.2 0, 0.0 5,-0.1 0.440 88.9 64.6 -75.0 0.6 1.4 -12.3 -10.8 29 29 A L H > S+ 0 0 98 2,-0.2 4,-3.4 3,-0.1 5,-0.2 0.941 94.3 50.6 -85.4 -60.7 0.6 -8.7 -10.1 30 30 A C H > S+ 0 0 6 1,-0.3 4,-1.5 2,-0.2 -1,-0.1 0.763 111.3 57.3 -48.6 -24.8 0.2 -8.7 -6.3 31 31 A D H X S+ 0 0 99 -4,-0.7 4,-1.5 2,-0.2 -1,-0.3 0.969 111.7 36.1 -70.8 -56.4 3.5 -10.4 -6.5 32 32 A E H X S+ 0 0 130 -4,-1.2 4,-1.8 2,-0.2 5,-0.3 0.937 110.2 64.1 -61.9 -49.4 5.3 -7.7 -8.4 33 33 A A H >X S+ 0 0 4 -4,-3.4 3,-1.7 1,-0.3 4,-1.0 0.901 102.5 48.8 -38.0 -61.8 3.4 -4.9 -6.6 34 34 A K H >< S+ 0 0 72 -4,-1.5 3,-2.2 1,-0.3 -1,-0.3 0.913 107.7 54.6 -45.4 -52.3 5.0 -6.0 -3.3 35 35 A E H >< S+ 0 0 117 -4,-1.5 3,-1.0 1,-0.3 -1,-0.3 0.788 105.8 53.9 -53.2 -29.1 8.4 -6.0 -5.0 36 36 A V H << S+ 0 0 45 -4,-1.8 -1,-0.3 -3,-1.7 -2,-0.2 0.679 106.0 52.4 -78.6 -19.3 7.5 -2.4 -6.0 37 37 A L T << S+ 0 0 1 -3,-2.2 -1,-0.2 -4,-1.0 -2,-0.2 0.088 81.8 99.5-101.6 19.8 6.9 -1.7 -2.3 38 38 A Q S X S+ 0 0 133 -3,-1.0 3,-1.4 1,-0.2 4,-0.3 0.947 85.0 42.5 -69.1 -51.1 10.3 -3.1 -1.4 39 39 A P T 3 S+ 0 0 80 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.438 120.3 47.4 -75.0 0.8 12.0 0.3 -1.1 40 40 A Y T 3 S+ 0 0 21 -3,-0.1 4,-0.4 2,-0.1 -2,-0.2 0.199 77.5 102.3-123.2 10.4 8.8 1.4 0.7 41 41 A K S < S+ 0 0 120 -3,-1.4 5,-0.5 1,-0.2 3,-0.2 0.833 97.3 32.5 -63.0 -33.1 8.6 -1.5 3.0 42 42 A D S S+ 0 0 94 -4,-0.3 -1,-0.2 1,-0.2 -2,-0.1 0.561 101.9 79.7 -97.3 -13.9 10.0 0.7 5.7 43 43 A R S S- 0 0 119 -6,-0.2 2,-0.3 1,-0.1 -2,-0.2 0.578 116.1 -23.1 -68.8 -9.0 8.3 3.8 4.2 44 44 A F S S- 0 0 3 -4,-0.4 2,-1.0 -3,-0.2 -26,-0.2 -0.969 83.9 -67.9 178.7 178.0 5.2 2.5 6.0 45 45 A I E -a 18 0A 95 -28,-2.7 -26,-1.7 -2,-0.3 2,-0.9 -0.784 44.3-149.8 -92.5 100.4 3.4 -0.4 7.4 46 46 A L E -a 19 0A 39 -2,-1.0 2,-1.0 -5,-0.5 -26,-0.2 -0.605 9.9-161.0 -73.7 105.7 2.5 -2.7 4.5 47 47 A Q E -a 20 0A 96 -28,-4.0 -26,-2.7 -2,-0.9 2,-0.8 -0.782 3.1-157.2 -93.8 98.4 -0.7 -4.4 5.6 48 48 A E E -a 21 0A 94 -2,-1.0 2,-0.5 -28,-0.2 -26,-0.2 -0.669 10.3-166.6 -79.5 108.4 -1.1 -7.5 3.4 49 49 A V E -a 22 0A 21 -28,-4.4 2,-1.0 -2,-0.8 -26,-1.0 -0.856 16.4-137.3-100.7 127.6 -4.8 -8.3 3.4 50 50 A D E > +a 23 0A 80 -2,-0.5 3,-0.7 1,-0.2 6,-0.2 -0.740 26.4 172.5 -86.6 103.1 -5.8 -11.7 2.1 51 51 A I T 3 S+ 0 0 2 -28,-1.4 9,-0.4 -2,-1.0 -1,-0.2 0.672 72.3 75.6 -81.7 -19.3 -8.8 -11.2 -0.1 52 52 A T T 3 S+ 0 0 72 -29,-0.5 -1,-0.2 -3,-0.1 5,-0.1 0.595 81.6 94.7 -66.9 -10.3 -8.6 -14.8 -1.2 53 53 A L S < S- 0 0 67 -3,-0.7 7,-0.2 1,-0.1 0, 0.0 -0.402 80.8-129.7 -80.7 160.1 -10.0 -15.6 2.2 54 54 A P S > S+ 0 0 102 0, 0.0 3,-1.6 0, 0.0 4,-0.3 0.910 109.2 52.4 -75.0 -45.5 -13.8 -16.0 2.9 55 55 A E T 3 S+ 0 0 156 1,-0.3 3,-0.2 2,-0.2 4,-0.1 0.720 118.4 39.9 -62.4 -21.1 -13.9 -13.7 5.8 56 56 A N T >> S+ 0 0 31 -6,-0.2 4,-1.7 1,-0.1 3,-0.8 0.291 80.0 113.3-108.1 4.7 -12.3 -11.2 3.5 57 57 A S H <> S+ 0 0 41 -3,-1.6 4,-4.4 1,-0.3 5,-0.2 0.805 73.2 62.3 -45.1 -33.1 -14.4 -12.3 0.6 58 58 A T H 3> S+ 0 0 101 -4,-0.3 4,-2.7 2,-0.2 5,-0.3 0.956 98.7 50.8 -58.6 -54.6 -15.9 -8.8 0.9 59 59 A W H <> S+ 0 0 81 -3,-0.8 4,-1.9 1,-0.2 -1,-0.2 0.896 117.8 42.3 -49.7 -43.9 -12.6 -7.1 0.1 60 60 A Y H < S+ 0 0 65 -4,-1.7 -2,-0.2 -9,-0.4 5,-0.2 0.967 108.5 55.6 -67.6 -55.8 -12.3 -9.3 -2.9 61 61 A E H < S+ 0 0 117 -4,-4.4 3,-0.3 1,-0.3 -2,-0.2 0.819 119.3 36.5 -45.9 -35.4 -16.0 -9.0 -4.0 62 62 A R H < S+ 0 0 126 -4,-2.7 -1,-0.3 1,-0.2 -2,-0.2 0.754 134.5 26.6 -88.5 -29.3 -15.3 -5.3 -4.0 63 63 A Y S < S+ 0 0 23 -4,-1.9 -2,-0.2 -5,-0.3 -1,-0.2 -0.548 77.6 118.9-134.8 68.1 -11.8 -5.7 -5.3 64 64 A K S S+ 0 0 77 -3,-0.3 -3,-0.1 -2,-0.1 -1,-0.1 0.572 95.5 20.6-103.6 -17.1 -11.6 -8.9 -7.2 65 65 A F S S+ 0 0 144 -5,-0.2 -2,-0.1 -3,-0.1 -4,-0.1 0.247 115.9 67.5-132.3 5.8 -10.6 -7.2 -10.5 66 66 A D S S+ 0 0 32 -6,-0.2 14,-0.3 3,-0.0 -2,-0.1 -0.077 88.5 164.4-117.3 29.5 -9.3 -3.9 -9.1 67 67 A I + 0 0 18 12,-0.2 2,-0.1 13,-0.1 -44,-0.1 -0.698 40.3 47.4-109.1 162.6 -6.3 -5.4 -7.4 68 68 A P S S- 0 0 3 0, 0.0 12,-1.8 0, 0.0 13,-0.9 0.480 79.4-170.6 -75.0 147.6 -3.8 -5.1 -6.3 69 69 A V E -BC 22 79A 0 -47,-0.8 -47,-1.8 10,-0.2 2,-0.4 -0.746 9.6-159.6-104.1 152.1 -5.3 -2.3 -4.2 70 70 A F E -BC 21 78A 0 8,-1.5 7,-3.3 -2,-0.3 8,-1.9 -0.967 4.3-170.3-137.3 118.7 -3.4 0.1 -2.0 71 71 A H E -BC 20 76A 16 -51,-1.3 -51,-2.6 -2,-0.4 2,-0.7 -0.940 5.9-162.6-112.2 118.4 -5.0 2.2 0.8 72 72 A L E S-B 19 0A 4 3,-2.4 -53,-0.2 -2,-0.6 -2,-0.0 -0.890 81.3 -9.7-103.8 112.3 -2.8 4.9 2.3 73 73 A N S S- 0 0 81 -55,-1.3 -1,-0.2 -2,-0.7 -54,-0.1 0.790 133.8 -53.5 72.5 29.0 -4.1 6.0 5.7 74 74 A G S S+ 0 0 60 -56,-0.7 2,-0.3 -3,-0.4 -1,-0.2 0.868 118.5 110.1 72.5 38.8 -7.3 4.1 5.1 75 75 A Q S S- 0 0 151 3,-0.0 -3,-2.4 -55,-0.0 -1,-0.2 -0.914 83.1-100.5-149.9 117.5 -7.9 5.7 1.7 76 76 A F E +C 71 0A 102 -2,-0.3 -5,-0.3 -5,-0.3 3,-0.1 -0.083 43.5 174.5 -38.2 102.8 -7.6 4.1 -1.7 77 77 A L E - 0 0 14 -7,-3.3 2,-0.3 1,-0.3 -6,-0.2 0.883 62.0 -32.2 -82.5 -43.5 -4.2 5.5 -2.7 78 78 A M E -C 70 0A 6 -8,-1.9 -8,-1.5 3,-0.1 -1,-0.3 -0.912 56.3-167.9-175.6 149.0 -4.0 3.5 -6.0 79 79 A M E +C 69 0A 44 -2,-0.3 -10,-0.2 -10,-0.2 -12,-0.2 -0.968 64.4 47.4-144.4 157.9 -5.1 0.2 -7.5 80 80 A H S S- 0 0 102 -12,-1.8 2,-0.3 -2,-0.3 -11,-0.1 0.543 121.9 -4.8 87.5 9.7 -4.4 -1.9 -10.6 81 81 A R S S- 0 0 188 -13,-0.9 2,-0.3 -3,-0.1 -1,-0.2 -0.974 84.3 -83.9 164.3-166.7 -0.7 -1.4 -10.0 82 82 A V - 0 0 14 -2,-0.3 2,-2.3 -3,-0.1 3,-0.2 -0.694 31.8-173.8-135.5 80.2 1.9 0.4 -7.9 83 83 A N >> - 0 0 84 -2,-0.3 3,-2.0 1,-0.2 4,-1.8 -0.509 5.0-173.0 -76.2 77.3 2.5 3.9 -9.1 84 84 A T H 3> S+ 0 0 41 -2,-2.3 4,-3.2 1,-0.3 5,-0.4 0.861 81.2 63.8 -35.8 -53.7 5.3 4.6 -6.7 85 85 A S H 3> S+ 0 0 89 1,-0.3 4,-2.2 2,-0.2 -1,-0.3 0.868 107.4 42.4 -39.1 -49.7 5.3 8.2 -7.9 86 86 A K H <> S+ 0 0 108 -3,-2.0 4,-2.3 2,-0.2 -1,-0.3 0.950 115.6 49.1 -64.1 -51.3 1.8 8.4 -6.5 87 87 A L H X S+ 0 0 0 -4,-1.8 4,-3.1 1,-0.2 -2,-0.2 0.968 110.7 49.0 -51.1 -63.8 2.7 6.6 -3.4 88 88 A E H X S+ 0 0 96 -4,-3.2 4,-2.9 1,-0.2 -1,-0.2 0.894 107.4 57.1 -41.7 -53.5 5.8 8.7 -2.7 89 89 A K H X S+ 0 0 125 -4,-2.2 4,-1.6 -5,-0.4 -1,-0.2 0.930 111.6 40.9 -43.4 -61.3 3.7 11.8 -3.2 90 90 A Q H < S+ 0 0 66 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.940 110.1 59.1 -53.5 -53.2 1.4 10.8 -0.5 91 91 A L H < S+ 0 0 29 -4,-3.1 3,-0.3 1,-0.2 4,-0.2 0.910 102.2 54.1 -40.5 -59.3 4.2 9.5 1.7 92 92 A R H < S+ 0 0 224 -4,-2.9 2,-0.5 1,-0.2 -1,-0.2 0.910 127.1 17.6 -41.2 -59.3 5.7 13.0 1.7 93 93 A K S < S+ 0 0 160 -4,-1.6 -1,-0.2 -5,-0.2 0, 0.0 -0.970 84.5 111.8-124.2 115.9 2.4 14.5 2.9 94 94 A L S S+ 0 0 45 -2,-0.5 -1,-0.1 -3,-0.3 -3,-0.1 0.372 79.7 33.4-140.2 -72.7 -0.1 12.3 4.5 95 95 A S S S- 0 0 61 -4,-0.2 -2,-0.1 1,-0.1 -4,-0.0 0.961 92.1-165.3 -58.1 -55.7 -0.7 12.8 8.2 96 96 A G - 0 0 39 0, 0.0 2,-0.8 0, 0.0 3,-0.3 -0.401 40.0 -22.2 96.5-175.3 -0.1 16.5 8.0 97 97 A P S S- 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.613 126.7 -20.0 -75.0 108.9 0.6 19.1 10.7 98 98 A S S S+ 0 0 125 -2,-0.8 2,-0.2 1,-0.2 0, 0.0 0.930 90.5 139.6 55.6 98.3 -0.8 17.7 13.9 99 99 A S 0 0 88 1,-0.4 -1,-0.2 -3,-0.3 0, 0.0 -0.641 360.0 360.0-172.9 108.4 -3.3 15.0 13.0 100 100 A G 0 0 134 -2,-0.2 -1,-0.4 0, 0.0 -2,-0.1 0.702 360.0 360.0 87.4 360.0 -3.9 11.7 14.7