==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 29-MAY-04 1WJL . COMPND 2 MOLECULE: CYPHER PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.SATO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5675.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 62.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 24.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-149.9 -13.5 18.7 -15.1 2 2 A S + 0 0 128 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.827 360.0 107.2-151.8 106.4 -14.2 15.4 -13.3 3 3 A S - 0 0 129 -2,-0.3 2,-0.4 2,-0.0 0, 0.0 -0.676 36.5-162.2 178.7 123.0 -13.2 12.0 -14.6 4 4 A G - 0 0 77 -2,-0.2 2,-0.3 0, 0.0 -2,-0.0 -0.935 15.2-136.8-118.0 138.1 -10.5 9.5 -13.8 5 5 A S - 0 0 122 -2,-0.4 2,-0.3 85,-0.0 -2,-0.0 -0.657 20.6-168.0 -92.1 147.6 -9.3 6.7 -15.9 6 6 A S - 0 0 100 -2,-0.3 84,-0.1 1,-0.1 82,-0.0 -0.889 21.7-176.0-132.2 162.1 -8.6 3.2 -14.6 7 7 A G S S- 0 0 49 82,-0.6 2,-0.1 -2,-0.3 83,-0.1 0.647 75.6 -24.7-123.2 -44.3 -6.9 0.0 -15.8 8 8 A M - 0 0 136 81,-0.5 81,-1.4 2,-0.1 2,-0.5 -0.521 54.0-152.9-179.5 104.9 -7.5 -2.6 -13.1 9 9 A S E +A 88 0A 93 79,-0.2 79,-0.2 -2,-0.1 2,-0.2 -0.752 29.3 161.9 -88.8 124.6 -8.1 -2.0 -9.4 10 10 A Y E -A 87 0A 31 77,-1.7 77,-2.3 -2,-0.5 2,-0.3 -0.767 24.6-139.2-132.8 177.5 -7.0 -4.9 -7.2 11 11 A S E -A 86 0A 68 75,-0.3 2,-0.4 -2,-0.2 75,-0.3 -0.930 6.4-142.1-138.8 161.3 -6.2 -5.7 -3.6 12 12 A V E -A 85 0A 3 73,-2.0 73,-1.9 -2,-0.3 2,-0.7 -0.983 4.9-150.4-129.1 138.6 -3.6 -7.6 -1.6 13 13 A T E -A 84 0A 82 -2,-0.4 2,-1.1 71,-0.2 71,-0.2 -0.858 14.5-178.8-111.8 96.1 -4.1 -9.7 1.6 14 14 A L E -A 83 0A 0 69,-2.4 69,-1.6 -2,-0.7 4,-0.1 -0.757 20.1-149.2 -97.0 89.3 -0.9 -9.6 3.6 15 15 A T E -A 82 0A 80 -2,-1.1 67,-0.3 67,-0.3 66,-0.1 -0.203 32.0 -78.2 -56.8 146.9 -1.8 -11.8 6.6 16 16 A G S S+ 0 0 21 65,-2.9 2,-0.2 64,-0.2 -1,-0.1 -0.761 105.1 41.3-109.9 156.2 -0.1 -11.0 9.8 17 17 A P S S+ 0 0 129 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 0.531 80.8 138.2 -75.0 154.2 2.3 -11.2 11.3 18 18 A G - 0 0 31 -2,-0.2 2,-0.2 -4,-0.1 -3,-0.1 0.929 60.3-127.7 -76.8 -91.7 4.2 -10.4 8.1 19 19 A P - 0 0 116 0, 0.0 2,-1.2 0, 0.0 25,-0.5 0.625 26.4-127.9 -75.0 174.4 6.3 -8.7 8.6 20 20 A W - 0 0 56 -2,-0.2 2,-1.3 1,-0.1 -4,-0.0 -0.750 23.6-173.0 -89.2 97.4 5.4 -6.2 5.8 21 21 A G + 0 0 19 -2,-1.2 19,-3.5 19,-0.1 2,-0.3 -0.334 52.6 97.8 -87.0 52.7 8.7 -5.9 3.9 22 22 A F E -E 39 0B 8 -2,-1.3 17,-0.2 17,-0.3 2,-0.2 -0.995 56.7-152.6-144.8 135.5 7.3 -3.1 1.7 23 23 A R E - 0 0 158 15,-1.7 14,-1.0 -2,-0.3 15,-0.3 -0.614 17.7-121.8-103.3 164.5 7.6 0.7 1.9 24 24 A L E -E 36 0B 4 12,-0.2 2,-0.3 -2,-0.2 12,-0.2 -0.736 20.3-147.6-105.6 155.1 5.2 3.4 0.7 25 25 A Q - 0 0 83 10,-2.6 10,-0.5 -2,-0.3 7,-0.1 -0.765 53.9 -20.8-118.7 164.6 5.9 6.1 -1.8 26 26 A G S S- 0 0 1 -2,-0.3 2,-0.3 8,-0.2 3,-0.1 0.039 70.5-179.7 36.9-140.9 4.7 9.7 -2.2 27 27 A G > - 0 0 2 5,-0.3 5,-4.5 1,-0.1 41,-0.2 -0.864 45.2 -65.7 142.1-174.3 1.5 10.3 -0.4 28 28 A K T > 5S+ 0 0 115 39,-0.8 3,-1.2 36,-0.3 40,-0.2 0.883 130.8 53.5 -75.9 -41.2 -1.1 13.0 0.3 29 29 A D T 3 5S+ 0 0 88 1,-0.3 -1,-0.2 -3,-0.1 39,-0.1 0.600 115.3 43.9 -68.4 -10.3 1.3 15.1 2.4 30 30 A F T 3 5S- 0 0 123 2,-0.3 -1,-0.3 -3,-0.0 -2,-0.2 0.386 112.1-120.7-111.9 -2.7 3.5 14.8 -0.7 31 31 A N T < 5S+ 0 0 159 -3,-1.2 -3,-0.2 1,-0.3 -2,-0.1 0.830 77.7 114.5 64.3 32.8 0.8 15.5 -3.2 32 32 A M S - 0 0 72 -19,-3.5 3,-1.6 -2,-0.3 2,-0.6 -0.644 32.3-118.4 -82.9 133.5 11.6 -7.1 0.2 41 41 A P T 3 S+ 0 0 123 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.606 100.8 17.4 -75.0 117.1 12.6 -10.1 -1.9 42 42 A G T 3 S+ 0 0 65 -2,-0.6 2,-0.1 1,-0.4 -2,-0.0 0.296 99.3 124.4 104.9 -5.4 11.2 -13.3 -0.4 43 43 A S S X S- 0 0 15 -3,-1.6 3,-0.8 -22,-0.1 -1,-0.4 -0.303 78.5-107.2 -81.3 168.8 8.6 -11.4 1.6 44 44 A K G > S+ 0 0 110 -25,-0.5 3,-1.9 1,-0.3 6,-0.2 0.823 122.1 60.7 -64.4 -31.9 4.9 -12.0 1.5 45 45 A A G > S+ 0 0 2 1,-0.3 3,-0.6 2,-0.2 5,-0.4 0.774 104.2 49.6 -65.4 -26.5 4.6 -8.7 -0.3 46 46 A A G < S+ 0 0 50 -3,-0.8 -1,-0.3 -6,-0.3 -2,-0.2 0.147 109.9 53.4 -96.8 16.7 6.8 -10.3 -3.0 47 47 A Q G < S+ 0 0 140 -3,-1.9 -1,-0.2 -6,-0.0 -2,-0.2 0.110 109.5 44.8-134.3 16.9 4.5 -13.3 -3.0 48 48 A S S < S- 0 0 48 -3,-0.6 -3,-0.1 2,-0.3 -36,-0.1 0.124 112.2 -67.5-125.0-120.7 1.2 -11.6 -3.6 49 49 A Q S S+ 0 0 119 -2,-0.1 2,-0.4 2,-0.0 -3,-0.1 0.307 87.0 120.3-125.4 0.8 0.2 -8.9 -6.0 50 50 A L + 0 0 7 -5,-0.4 2,-0.3 -6,-0.2 -2,-0.3 -0.563 37.7 170.7 -73.3 126.8 2.2 -6.1 -4.4 51 51 A S > - 0 0 64 -2,-0.4 3,-1.9 -5,-0.0 -15,-0.4 -0.978 41.6 -91.7-139.2 150.4 4.7 -4.6 -6.9 52 52 A Q T 3 S+ 0 0 123 -2,-0.3 -15,-0.2 1,-0.3 -14,-0.1 -0.437 114.4 23.4 -63.4 123.1 7.0 -1.6 -7.0 53 53 A G T 3 S+ 0 0 43 -17,-1.4 -1,-0.3 1,-0.3 -16,-0.1 -0.005 86.6 145.6 109.7 -25.8 5.2 1.3 -8.6 54 54 A D < - 0 0 9 -3,-1.9 -18,-1.1 -18,-0.2 2,-0.7 0.075 52.1-120.0 -39.9 156.2 1.7 -0.0 -7.8 55 55 A L E -BC 35 88A 49 33,-1.2 33,-1.5 -20,-0.2 2,-0.3 -0.907 22.6-151.6-111.4 105.0 -0.9 2.6 -7.0 56 56 A V E + C 0 87A 3 -22,-3.6 -22,-0.4 -2,-0.7 31,-0.3 -0.588 23.6 166.6 -77.2 132.3 -2.3 2.2 -3.5 57 57 A V E + 0 0 35 29,-4.1 7,-2.9 1,-0.4 8,-0.7 0.770 66.4 11.4-109.4 -52.5 -5.9 3.5 -3.2 58 58 A A E -DC 63 86A 18 28,-1.1 28,-4.2 5,-0.3 2,-0.6 -0.971 61.9-145.8-132.7 146.8 -7.1 2.1 0.1 59 59 A I E S- C 0 85A 0 3,-3.8 26,-0.3 -2,-0.3 25,-0.1 -0.942 86.5 -19.4-117.0 110.6 -5.3 0.4 3.0 60 60 A D S S- 0 0 54 24,-1.2 25,-0.2 -2,-0.6 -1,-0.1 0.701 137.0 -43.4 67.5 19.3 -7.2 -2.3 4.8 61 61 A G S S+ 0 0 64 1,-0.2 2,-0.5 23,-0.1 -1,-0.2 0.667 118.3 115.9 96.8 23.0 -10.3 -0.6 3.3 62 62 A V - 0 0 51 10,-0.0 -3,-3.8 24,-0.0 -1,-0.2 -0.955 65.8-124.4-129.2 111.6 -9.2 2.9 4.0 63 63 A N B -D 58 0A 58 -2,-0.5 -5,-0.3 -5,-0.3 -4,-0.2 0.018 13.4-158.9 -46.2 158.5 -8.5 5.3 1.1 64 64 A T S S+ 0 0 1 -7,-2.9 -36,-0.3 2,-0.1 8,-0.1 0.630 77.8 83.7-114.3 -28.6 -5.0 6.8 1.0 65 65 A D S S+ 0 0 102 -8,-0.7 -34,-0.1 1,-0.3 -7,-0.1 0.760 105.8 37.2 -47.4 -25.6 -5.7 9.8 -1.2 66 66 A T S S+ 0 0 89 2,-0.1 2,-0.4 -38,-0.0 -1,-0.3 0.710 108.0 77.4 -97.5 -28.2 -6.9 11.3 2.1 67 67 A M S S- 0 0 11 -3,-0.1 -39,-0.8 1,-0.1 -33,-0.1 -0.689 79.8-128.4 -88.2 136.0 -4.2 9.7 4.2 68 68 A T > - 0 0 41 -2,-0.4 4,-3.1 -40,-0.2 5,-0.3 -0.133 34.0 -92.7 -73.2 174.2 -0.7 11.1 4.2 69 69 A H H > S+ 0 0 31 2,-0.2 4,-2.0 1,-0.2 5,-0.1 0.916 129.6 41.6 -53.5 -47.5 2.4 9.1 3.6 70 70 A L H > S+ 0 0 108 2,-0.2 4,-3.8 1,-0.2 5,-0.3 0.987 112.6 52.2 -63.6 -61.6 2.8 8.6 7.3 71 71 A E H > S+ 0 0 109 1,-0.3 4,-1.9 2,-0.2 -2,-0.2 0.894 111.1 48.0 -38.7 -58.7 -0.9 8.0 8.0 72 72 A A H X S+ 0 0 0 -4,-3.1 4,-1.1 1,-0.2 3,-0.3 0.915 114.5 46.9 -50.3 -48.8 -0.9 5.3 5.3 73 73 A Q H >X S+ 0 0 29 -4,-2.0 4,-1.2 -5,-0.3 3,-1.0 0.921 107.3 55.6 -59.7 -46.8 2.2 3.9 6.8 74 74 A N H 3X S+ 0 0 89 -4,-3.8 4,-2.7 1,-0.3 -1,-0.3 0.808 101.2 61.1 -55.6 -30.4 0.8 4.0 10.3 75 75 A K H 3X S+ 0 0 52 -4,-1.9 4,-2.7 -5,-0.3 -1,-0.3 0.880 95.6 59.8 -64.0 -39.1 -2.0 2.0 8.9 76 76 A I H << S+ 0 0 12 -4,-1.1 -1,-0.2 -3,-1.0 -2,-0.2 0.908 110.3 41.6 -54.6 -45.2 0.4 -0.8 8.1 77 77 A K H < S+ 0 0 141 -4,-1.2 -2,-0.2 1,-0.2 -1,-0.2 0.923 108.7 59.8 -68.2 -46.1 1.2 -1.0 11.8 78 78 A S H < S+ 0 0 79 -4,-2.7 -2,-0.2 -5,-0.1 -1,-0.2 0.904 87.7 93.2 -47.0 -49.6 -2.4 -0.6 12.8 79 79 A A < + 0 0 13 -4,-2.7 4,-0.2 1,-0.1 -19,-0.0 0.007 46.5 158.8 -43.7 153.4 -3.2 -3.8 10.8 80 80 A S + 0 0 96 2,-0.8 -64,-0.2 -64,-0.1 -1,-0.1 0.240 64.6 29.3-140.4 -89.7 -3.1 -7.0 12.9 81 81 A Y S S- 0 0 207 1,-0.2 -65,-2.9 -66,-0.1 2,-0.3 0.917 134.6 -2.2 -47.3 -53.6 -4.8 -10.1 11.8 82 82 A N E -A 15 0A 76 -67,-0.3 -2,-0.8 -22,-0.0 2,-0.6 -0.965 61.7-138.8-141.4 155.6 -4.4 -9.2 8.1 83 83 A L E -A 14 0A 0 -69,-1.6 -69,-2.4 -2,-0.3 2,-0.2 -0.841 25.3-171.8-120.0 91.7 -3.0 -6.3 6.2 84 84 A S E -A 13 0A 31 -2,-0.6 -24,-1.2 -71,-0.2 2,-0.3 -0.591 4.2-178.2 -84.3 144.4 -5.2 -5.5 3.2 85 85 A L E -AC 12 59A 2 -73,-1.9 -73,-2.0 -26,-0.3 2,-0.6 -0.929 17.3-147.5-148.0 118.1 -4.1 -3.0 0.6 86 86 A T E -AC 11 58A 42 -28,-4.2 -29,-4.1 -2,-0.3 -28,-1.1 -0.778 24.2-178.5 -90.1 117.8 -6.1 -1.9 -2.4 87 87 A L E -AC 10 56A 0 -77,-2.3 -77,-1.7 -2,-0.6 2,-0.4 -0.588 14.3-141.4-108.8 172.4 -3.9 -1.0 -5.4 88 88 A Q E -AC 9 55A 39 -33,-1.5 -33,-1.2 -79,-0.2 2,-0.8 -0.995 19.6-116.4-138.9 142.7 -4.7 0.2 -8.8 89 89 A K 0 0 85 -81,-1.4 -82,-0.6 -2,-0.4 -81,-0.5 -0.691 360.0 360.0 -81.0 110.3 -3.3 -0.5 -12.3 90 90 A S 0 0 131 -2,-0.8 -1,-0.2 -83,-0.1 -81,-0.0 0.962 360.0 360.0 -60.0 360.0 -1.7 2.6 -13.6