==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-JAN-05 1WX8 . COMPND 2 MOLECULE: RIKEN CDNA 4931431F19; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR C.ZHAO,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7395.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 61.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 16.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 139 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -61.5 -26.3 -11.4 -10.0 2 2 A S - 0 0 120 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.823 360.0-173.6-124.2 163.5 -24.0 -8.5 -9.4 3 3 A S - 0 0 127 -2,-0.3 2,-0.2 2,-0.0 0, 0.0 -0.930 2.4-166.8-149.2 169.6 -22.7 -6.6 -6.3 4 4 A G - 0 0 72 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.787 7.2-150.4-146.0-172.7 -20.7 -3.6 -5.3 5 5 A S + 0 0 129 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.812 12.6 178.0-172.0 127.8 -19.0 -2.0 -2.4 6 6 A S + 0 0 130 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.844 18.7 117.2-130.6 166.8 -18.2 1.6 -1.4 7 7 A G - 0 0 62 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.879 48.5-110.2 156.5 174.7 -16.6 3.5 1.5 8 8 A V - 0 0 133 -2,-0.3 2,-0.8 2,-0.0 -2,-0.0 -0.882 20.1-151.2-141.8 105.0 -13.8 5.7 2.6 9 9 A S + 0 0 58 -2,-0.4 -2,-0.0 32,-0.1 2,-0.0 -0.676 63.3 79.6 -79.9 109.8 -11.1 4.3 4.8 10 10 A G + 0 0 76 -2,-0.8 -1,-0.0 2,-0.0 -2,-0.0 -0.029 29.1 150.7 150.4 101.1 -9.7 7.2 6.8 11 11 A R S S- 0 0 241 1,-0.4 -2,-0.0 -2,-0.0 0, 0.0 0.762 71.0 -32.7-110.4 -50.0 -11.2 8.8 9.9 12 12 A E - 0 0 143 0, 0.0 2,-1.2 0, 0.0 -1,-0.4 -0.957 64.8 -86.3-171.0 156.4 -8.2 10.1 11.9 13 13 A P + 0 0 102 0, 0.0 4,-0.1 0, 0.0 20,-0.0 -0.599 55.7 151.7 -75.0 97.7 -4.6 9.5 12.7 14 14 A S + 0 0 110 -2,-1.2 3,-0.1 2,-0.1 2,-0.0 0.919 57.6 47.9 -89.8 -59.8 -4.8 7.1 15.6 15 15 A S S S- 0 0 40 1,-0.1 2,-0.6 21,-0.0 19,-0.0 -0.278 107.7 -77.0 -78.6 168.1 -1.6 5.1 15.3 16 16 A R - 0 0 203 18,-0.1 19,-2.4 -2,-0.0 20,-0.2 -0.563 51.3-140.2 -70.9 113.1 1.9 6.6 14.7 17 17 A I E -A 34 0A 56 -2,-0.6 2,-0.3 17,-0.3 17,-0.2 -0.393 18.2-161.3 -73.2 151.6 2.1 7.5 11.1 18 18 A I E -A 33 0A 5 15,-2.0 15,-1.0 -2,-0.1 2,-0.9 -0.936 23.5-112.6-134.4 156.2 5.3 6.9 9.2 19 19 A R E -A 32 0A 121 -2,-0.3 61,-1.7 13,-0.2 62,-0.9 -0.795 34.9-176.0 -93.5 102.8 6.8 8.2 6.0 20 20 A V E -Ab 31 81A 0 11,-3.1 11,-3.0 -2,-0.9 2,-0.8 -0.894 21.8-137.0-103.8 116.5 6.9 5.4 3.5 21 21 A S E -Ab 30 82A 37 60,-4.3 62,-3.2 -2,-0.6 2,-0.6 -0.620 18.2-152.2 -75.2 110.4 8.6 6.2 0.2 22 22 A V E -Ab 29 83A 2 7,-2.8 7,-3.0 -2,-0.8 2,-0.6 -0.760 4.1-153.4 -88.5 121.5 6.5 4.7 -2.5 23 23 A K E -Ab 28 84A 88 60,-2.9 62,-2.7 -2,-0.6 5,-0.2 -0.863 16.3-174.6 -99.4 117.7 8.4 3.8 -5.6 24 24 A T - 0 0 36 3,-1.8 2,-2.6 -2,-0.6 62,-0.1 -0.740 40.2 -98.9-110.3 159.2 6.4 3.8 -8.8 25 25 A P S S+ 0 0 109 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 -0.422 116.9 16.0 -75.0 68.6 7.3 2.8 -12.4 26 26 A Q S S+ 0 0 199 -2,-2.6 2,-0.2 1,-0.5 -3,-0.0 -0.224 128.9 7.2 166.7 -61.8 7.9 6.4 -13.4 27 27 A D S S- 0 0 118 2,-0.0 -3,-1.8 0, 0.0 -1,-0.5 -0.610 70.6-106.3-131.0-169.8 8.3 8.7 -10.5 28 28 A C E -A 23 0A 81 -2,-0.2 2,-0.3 -5,-0.2 -5,-0.2 -0.963 29.6-178.8-128.2 144.4 8.6 8.6 -6.7 29 29 A H E -A 22 0A 72 -7,-3.0 -7,-2.8 -2,-0.4 2,-0.5 -0.957 20.1-133.4-140.5 157.0 6.0 9.5 -4.1 30 30 A E E -A 21 0A 105 -2,-0.3 2,-0.4 -9,-0.3 -9,-0.2 -0.959 18.6-165.2-117.5 127.4 5.8 9.5 -0.3 31 31 A F E -A 20 0A 11 -11,-3.0 -11,-3.1 -2,-0.5 2,-0.6 -0.889 7.3-156.7-113.5 142.2 2.9 8.1 1.6 32 32 A F E +A 19 0A 107 -2,-0.4 2,-0.3 -13,-0.2 -13,-0.2 -0.905 33.1 140.3-121.7 102.2 2.0 8.7 5.3 33 33 A L E -A 18 0A 12 -15,-1.0 -15,-2.0 -2,-0.6 4,-0.1 -0.884 61.2 -64.4-135.5 165.6 -0.1 6.0 6.9 34 34 A A E > -A 17 0A 12 -2,-0.3 3,-1.3 -17,-0.2 -17,-0.3 -0.263 39.2-140.7 -52.2 127.3 -0.3 4.2 10.2 35 35 A E T 3 S+ 0 0 58 -19,-2.4 38,-1.7 1,-0.3 37,-0.5 0.745 104.5 57.2 -62.6 -23.8 2.9 2.2 10.7 36 36 A N T 3 S+ 0 0 77 -20,-0.2 2,-0.7 36,-0.2 -1,-0.3 -0.167 79.8 124.5 -99.3 37.2 0.7 -0.5 12.2 37 37 A S < - 0 0 13 -3,-1.3 5,-0.3 -4,-0.1 35,-0.2 -0.888 67.8-116.3-104.0 111.5 -1.4 -0.6 9.0 38 38 A N > - 0 0 47 -2,-0.7 4,-2.0 33,-0.2 33,-0.3 0.032 33.5-102.3 -39.7 149.4 -1.7 -4.1 7.5 39 39 A V H > S+ 0 0 0 31,-3.6 4,-2.3 28,-0.6 29,-0.2 0.876 123.8 58.5 -43.4 -45.7 -0.1 -4.3 4.1 40 40 A R H >> S+ 0 0 111 28,-0.8 4,-2.3 2,-0.2 3,-1.0 0.963 103.3 48.3 -48.5 -67.9 -3.7 -4.2 2.8 41 41 A R H 3> S+ 0 0 128 1,-0.3 4,-2.2 27,-0.3 -1,-0.2 0.888 110.8 52.2 -38.6 -56.9 -4.6 -0.9 4.3 42 42 A F H 3X S+ 0 0 0 -4,-2.0 4,-1.0 -5,-0.3 -1,-0.3 0.867 109.1 51.3 -49.4 -42.2 -1.3 0.6 3.0 43 43 A K H XX S+ 0 0 23 -4,-2.3 4,-2.3 -3,-1.0 3,-1.9 0.962 104.0 55.6 -60.6 -54.5 -2.3 -0.7 -0.4 44 44 A K H 3X S+ 0 0 72 -4,-2.3 4,-2.3 1,-0.3 -1,-0.2 0.889 100.8 60.2 -43.8 -48.3 -5.7 0.9 -0.3 45 45 A Q H 3X S+ 0 0 68 -4,-2.2 4,-1.5 1,-0.2 -1,-0.3 0.850 108.5 44.3 -48.9 -38.9 -4.0 4.2 0.3 46 46 A I H S+ 0 0 1 -3,-1.9 4,-2.2 -4,-1.0 5,-0.8 0.927 108.1 55.5 -72.2 -47.4 -2.3 3.6 -3.0 47 47 A S H <5S+ 0 0 25 -4,-2.3 4,-0.3 1,-0.2 -2,-0.2 0.782 105.9 56.3 -55.3 -27.9 -5.5 2.6 -4.7 48 48 A K H <5S+ 0 0 86 -4,-2.3 -1,-0.2 -5,-0.3 -2,-0.2 0.961 122.2 22.8 -68.6 -53.9 -6.9 5.9 -3.5 49 49 A Y H <5S+ 0 0 119 -4,-1.5 -2,-0.2 1,-0.2 -3,-0.2 0.984 125.2 48.1 -75.8 -66.5 -4.2 8.0 -5.2 50 50 A L T <5S- 0 0 51 -4,-2.2 -3,-0.2 1,-0.1 -1,-0.2 0.764 99.9-141.4 -45.7 -26.5 -3.0 5.7 -8.0 51 51 A H < + 0 0 163 -5,-0.8 -4,-0.2 -4,-0.3 -3,-0.2 0.829 61.0 118.9 64.5 32.8 -6.7 5.3 -8.6 52 52 A C S S- 0 0 29 -6,-0.3 2,-0.5 -5,-0.0 -1,-0.1 -0.081 72.1 -75.4-106.2-153.3 -6.1 1.7 -9.3 53 53 A N >> - 0 0 101 35,-0.2 3,-2.0 1,-0.1 4,-0.6 -0.962 18.7-150.1-117.9 128.7 -7.3 -1.5 -7.7 54 54 A A T 34 S+ 0 0 15 -2,-0.5 -1,-0.1 1,-0.3 -10,-0.1 0.625 100.3 68.1 -67.6 -12.5 -6.0 -2.8 -4.4 55 55 A D T 34 S+ 0 0 130 1,-0.2 -1,-0.3 -12,-0.1 32,-0.0 0.615 108.1 36.1 -80.5 -14.0 -6.8 -6.2 -5.8 56 56 A R T <4 S+ 0 0 104 -3,-2.0 32,-2.0 30,-0.1 2,-0.3 0.372 98.0 103.1-115.4 -2.9 -4.1 -5.7 -8.3 57 57 A L B < -E 87 0B 4 -4,-0.6 2,-0.4 30,-0.2 30,-0.2 -0.617 53.1-162.9 -84.8 142.3 -1.7 -3.8 -6.0 58 58 A V - 0 0 31 28,-0.7 28,-0.5 -2,-0.3 2,-0.5 -0.993 12.4-137.4-130.1 133.2 1.2 -5.6 -4.5 59 59 A L + 0 0 3 -2,-0.4 7,-2.3 7,-0.3 2,-0.4 -0.770 23.8 176.5 -91.9 129.1 3.3 -4.6 -1.5 60 60 A I E +CD 65 84A 21 24,-1.1 24,-3.0 -2,-0.5 2,-0.6 -0.926 4.0 179.8-137.6 109.3 7.1 -5.0 -1.9 61 61 A F E > S-CD 64 83A 37 3,-2.1 3,-1.1 -2,-0.4 22,-0.2 -0.940 78.5 -10.3-115.3 113.5 9.4 -3.9 0.9 62 62 A T T 3 S- 0 0 115 20,-0.7 -1,-0.1 -2,-0.6 3,-0.1 0.445 128.3 -61.1 81.4 1.1 13.1 -4.4 0.3 63 63 A G T 3 S+ 0 0 50 1,-0.4 2,-0.5 21,-0.1 -1,-0.2 0.130 114.2 113.3 109.6 -16.6 12.2 -6.5 -2.7 64 64 A K E < -C 61 0A 158 -3,-1.1 -3,-2.1 1,-0.0 -1,-0.4 -0.785 67.9-126.4 -92.6 127.5 10.3 -9.1 -0.7 65 65 A I E -C 60 0A 103 -2,-0.5 -5,-0.3 -5,-0.2 2,-0.1 -0.497 26.5-154.8 -73.2 138.5 6.6 -9.2 -1.4 66 66 A L - 0 0 12 -7,-2.3 2,-0.4 -2,-0.2 -7,-0.3 -0.360 10.5-116.9-102.9-175.4 4.4 -8.9 1.7 67 67 A R > - 0 0 155 -2,-0.1 3,-1.7 4,-0.1 -28,-0.6 -0.986 18.7-123.5-130.6 138.7 0.9 -10.0 2.5 68 68 A D T 3 S+ 0 0 65 -2,-0.4 -28,-0.8 1,-0.3 -27,-0.3 0.768 116.3 63.5 -46.2 -27.0 -2.3 -8.0 3.2 69 69 A Q T 3 S+ 0 0 149 -31,-0.1 2,-0.4 -30,-0.1 -1,-0.3 -0.104 93.1 83.7 -90.9 34.8 -2.2 -10.2 6.4 70 70 A D S < S- 0 0 35 -3,-1.7 -31,-3.6 -33,-0.0 -30,-0.2 -0.998 72.9-132.7-141.5 134.3 1.1 -8.6 7.4 71 71 A I > - 0 0 42 -2,-0.4 4,-1.2 -33,-0.3 6,-0.2 -0.383 18.0-125.6 -81.0 162.1 1.8 -5.4 9.2 72 72 A L H >>>S+ 0 0 0 -37,-0.5 4,-2.6 -35,-0.2 5,-1.3 0.997 107.8 38.5 -69.5 -70.3 4.4 -2.9 8.1 73 73 A S H 345S+ 0 0 37 -38,-1.7 3,-0.2 1,-0.3 -1,-0.1 0.923 114.7 55.5 -44.7 -57.2 6.5 -2.6 11.2 74 74 A Q H 345S+ 0 0 162 1,-0.3 -1,-0.3 2,-0.1 -2,-0.2 0.858 112.0 44.5 -44.6 -42.4 6.1 -6.3 11.9 75 75 A R H <<5S- 0 0 106 -4,-1.2 -1,-0.3 -3,-0.8 -2,-0.2 0.859 129.4 -99.1 -71.5 -37.3 7.5 -6.8 8.4 76 76 A G T <5S+ 0 0 33 -4,-2.6 -3,-0.2 1,-0.3 2,-0.2 0.044 73.8 143.2 140.0 -23.8 10.2 -4.2 9.0 77 77 A I < + 0 0 0 -5,-1.3 -1,-0.3 -6,-0.2 2,-0.1 -0.275 28.9 168.9 -50.2 108.8 8.7 -1.2 7.3 78 78 A L > - 0 0 100 -2,-0.2 3,-0.8 1,-0.1 2,-0.4 -0.312 43.6 -53.4-110.4-165.3 9.8 1.6 9.6 79 79 A D T 3 S+ 0 0 111 1,-0.2 -59,-0.1 -2,-0.1 -1,-0.1 -0.635 124.4 17.8 -78.4 125.0 9.8 5.4 9.3 80 80 A G T 3 S+ 0 0 40 -61,-1.7 -1,-0.2 -2,-0.4 2,-0.2 0.872 92.7 148.1 82.5 42.0 11.5 6.6 6.2 81 81 A S E < -b 20 0A 18 -62,-0.9 -60,-4.3 -3,-0.8 2,-0.5 -0.642 44.4-126.2-105.7 164.3 11.4 3.3 4.3 82 82 A T E -b 21 0A 60 -2,-0.2 -20,-0.7 -62,-0.2 2,-0.4 -0.957 24.5-177.7-116.5 123.7 11.0 2.6 0.6 83 83 A V E -bD 22 61A 3 -62,-3.2 -60,-2.9 -2,-0.5 2,-0.4 -0.975 22.0-132.5-123.0 133.2 8.3 0.4 -0.7 84 84 A H E -bD 23 60A 93 -24,-3.0 -24,-1.1 -2,-0.4 2,-0.3 -0.692 21.0-149.6 -85.9 131.9 7.8 -0.6 -4.3 85 85 A V - 0 0 9 -62,-2.7 2,-0.3 -2,-0.4 -26,-0.1 -0.729 14.1-174.1-101.4 151.1 4.3 -0.3 -5.7 86 86 A V - 0 0 54 -28,-0.5 -28,-0.7 -2,-0.3 2,-0.1 -0.973 21.0-160.4-143.1 154.3 2.8 -2.4 -8.4 87 87 A V B -E 57 0B 63 -2,-0.3 -30,-0.2 -30,-0.2 -33,-0.1 -0.528 23.5-155.4-135.4 65.8 -0.4 -2.5 -10.4 88 88 A R - 0 0 177 -32,-2.0 2,-0.3 -2,-0.1 -35,-0.2 0.064 12.0-171.4 -38.9 151.0 -0.7 -6.0 -11.8 89 89 A S + 0 0 79 2,-0.0 2,-0.2 0, 0.0 -1,-0.1 -0.861 20.8 165.8-157.3 116.7 -2.8 -6.3 -14.9 90 90 A H S S+ 0 0 187 -2,-0.3 -2,-0.0 2,-0.1 0, 0.0 -0.602 75.9 33.8-132.9 71.0 -4.0 -9.4 -16.7 91 91 A S S S- 0 0 97 -2,-0.2 3,-0.1 5,-0.0 -2,-0.0 -0.003 102.9 -97.3-179.1 -54.7 -6.7 -8.4 -19.1 92 92 A G - 0 0 30 1,-0.1 -2,-0.1 3,-0.0 0, 0.0 -0.735 33.7 -79.2 138.0 174.7 -6.1 -4.9 -20.5 93 93 A P S S+ 0 0 144 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 0.903 109.2 58.0 -75.0 -44.5 -7.0 -1.2 -20.1 94 94 A S S S+ 0 0 98 -3,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.376 88.4 46.0 -83.4 165.0 -10.3 -1.5 -21.8 95 95 A S 0 0 105 -2,-0.1 -3,-0.0 1,-0.1 0, 0.0 0.868 360.0 360.0 66.9 106.5 -13.2 -3.8 -20.8 96 96 A G 0 0 132 -5,-0.0 -2,-0.1 0, 0.0 -1,-0.1 -0.439 360.0 360.0 134.3 360.0 -13.9 -3.8 -17.1