==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 01-FEB-05 1WXS . COMPND 2 MOLECULE: UBIQUITIN-FOLD MODIFIER 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.SASAKAWA,E.SAKATA,Y.YAMAGUCHI,M.KOMATSU,K.TATSUMI, . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6606.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 52.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 14.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 15.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -4 A G 0 0 117 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 71.6 25.0 19.9 -8.7 2 -3 A P + 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.517 360.0 167.3 -69.4 120.8 21.6 18.6 -9.7 3 -2 A L + 0 0 168 -2,-0.4 2,-0.1 2,-0.0 0, 0.0 -0.990 11.1 153.1-137.8 145.6 18.9 19.5 -7.1 4 -1 A G + 0 0 70 -2,-0.3 2,-0.3 0, 0.0 0, 0.0 -0.559 18.3 127.9-175.0 104.3 15.1 19.4 -7.1 5 0 A S + 0 0 82 -2,-0.1 3,-0.1 1,-0.1 -2,-0.0 -0.925 10.1 147.0-151.3 173.3 12.8 19.0 -4.1 6 1 A M S S+ 0 0 168 -2,-0.3 2,-0.3 1,-0.0 -1,-0.1 0.155 76.4 26.5-178.8 -36.4 9.7 20.5 -2.4 7 2 A S + 0 0 46 2,-0.0 23,-0.5 24,-0.0 2,-0.3 -0.952 60.9 162.7-151.0 126.3 7.7 17.7 -0.9 8 3 A K - 0 0 155 -2,-0.3 2,-0.3 21,-0.2 -3,-0.0 -0.972 7.3-179.6-142.3 155.5 8.7 14.2 0.3 9 4 A V E -A 28 0A 34 19,-1.2 19,-2.3 -2,-0.3 2,-0.7 -0.989 28.8-116.3-153.5 156.9 7.2 11.5 2.6 10 5 A S E -A 27 0A 72 -2,-0.3 2,-0.4 17,-0.3 17,-0.3 -0.868 28.9-161.5-102.1 114.7 8.0 8.1 3.9 11 6 A F E -A 26 0A 3 15,-1.3 15,-2.3 -2,-0.7 2,-0.6 -0.772 5.3-150.7 -97.4 138.3 5.7 5.3 2.8 12 7 A K E +Ab 25 78A 55 65,-2.2 67,-2.2 -2,-0.4 2,-0.6 -0.918 17.5 174.6-112.3 111.1 5.5 2.0 4.6 13 8 A I E - b 0 79A 4 11,-1.9 2,-0.5 -2,-0.6 67,-0.2 -0.889 9.1-168.6-119.8 101.2 4.5 -1.0 2.5 14 9 A T E - b 0 80A 2 65,-2.9 67,-2.2 -2,-0.6 9,-0.1 -0.778 10.5-171.0 -92.2 124.4 4.6 -4.4 4.3 15 10 A L S S- 0 0 40 -2,-0.5 -1,-0.2 65,-0.2 8,-0.1 0.834 91.6 -2.5 -80.1 -34.8 4.3 -7.5 2.1 16 11 A T S S- 0 0 80 6,-0.2 7,-0.1 2,-0.1 -2,-0.1 0.613 72.5-161.3-125.0 -35.4 4.0 -9.8 5.1 17 12 A S + 0 0 51 5,-0.3 6,-0.1 1,-0.2 -3,-0.1 0.802 37.8 159.8 51.7 30.1 4.3 -7.6 8.2 18 13 A D - 0 0 94 4,-0.3 -1,-0.2 1,-0.1 -2,-0.1 -0.386 53.2-121.1 -81.2 160.5 5.1 -10.8 10.1 19 14 A P S S+ 0 0 130 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.817 106.8 61.3 -69.6 -31.9 6.9 -11.0 13.4 20 15 A R S S+ 0 0 221 2,-0.1 -3,-0.0 0, 0.0 0, 0.0 0.994 111.5 27.2 -58.3 -70.5 9.6 -13.2 12.0 21 16 A L S S- 0 0 119 1,-0.2 -5,-0.0 0, 0.0 0, 0.0 -0.550 90.0-105.8 -94.3 160.7 11.0 -10.8 9.4 22 17 A P - 0 0 104 0, 0.0 -4,-0.3 0, 0.0 -5,-0.3 0.107 38.9 -95.8 -70.0-170.9 10.9 -7.0 9.4 23 18 A Y - 0 0 122 -6,-0.1 2,-0.7 -7,-0.1 -9,-0.1 -0.651 27.7-111.4-109.0 166.7 8.7 -4.7 7.3 24 19 A K + 0 0 91 -2,-0.2 -11,-1.9 -11,-0.2 2,-0.5 -0.872 39.3 169.7-103.2 111.3 9.2 -2.9 4.0 25 20 A V E +A 12 0A 69 -2,-0.7 -13,-0.2 -13,-0.3 2,-0.2 -0.978 3.3 172.2-126.1 123.3 9.4 0.8 4.3 26 21 A L E -A 11 0A 54 -15,-2.3 -15,-1.3 -2,-0.5 2,-0.5 -0.675 27.5-119.9-120.3 175.7 10.4 3.2 1.5 27 22 A S E +A 10 0A 92 -17,-0.3 -17,-0.3 -2,-0.2 -15,-0.0 -0.976 37.1 155.2-124.2 126.1 10.5 6.9 0.8 28 23 A V E -A 9 0A 27 -19,-2.3 -19,-1.2 -2,-0.5 4,-0.1 -0.984 38.2-103.4-146.9 156.2 8.7 8.7 -2.0 29 24 A P - 0 0 59 0, 0.0 -21,-0.2 0, 0.0 3,-0.1 -0.039 29.4-116.4 -69.8 176.7 7.2 12.1 -2.9 30 25 A E S S+ 0 0 89 -23,-0.5 39,-2.1 1,-0.2 2,-1.6 0.780 103.2 71.3 -86.2 -30.7 3.5 13.0 -2.8 31 26 A S S S+ 0 0 88 -24,-0.3 -1,-0.2 37,-0.2 -24,-0.0 -0.550 82.9 94.3 -88.3 73.9 3.3 13.7 -6.5 32 27 A T S S- 0 0 20 -2,-1.6 36,-2.2 -3,-0.1 2,-1.0 -0.991 85.3 -88.1-160.0 154.5 3.6 10.1 -7.8 33 28 A P B > -D 67 0B 78 0, 0.0 4,-2.8 0, 0.0 5,-0.3 -0.525 34.6-167.1 -69.7 98.8 1.4 7.2 -8.8 34 29 A F H > S+ 0 0 5 -2,-1.0 4,-3.3 32,-0.8 5,-0.2 0.947 87.4 48.2 -50.2 -56.9 0.7 5.3 -5.5 35 30 A T H > S+ 0 0 40 29,-0.4 4,-3.0 31,-0.4 5,-0.4 0.932 112.6 49.1 -50.3 -53.6 -0.6 2.2 -7.3 36 31 A A H > S+ 0 0 30 1,-0.2 4,-2.6 28,-0.2 -2,-0.2 0.958 114.5 43.3 -51.5 -60.1 2.4 2.2 -9.7 37 32 A V H X S+ 0 0 29 -4,-2.8 4,-2.4 2,-0.2 5,-0.4 0.909 117.5 48.3 -53.2 -46.8 5.0 2.5 -6.9 38 33 A L H X S+ 0 0 2 -4,-3.3 4,-3.3 -5,-0.3 5,-0.4 0.991 114.8 40.9 -57.9 -67.3 3.1 -0.0 -4.8 39 34 A K H X S+ 0 0 103 -4,-3.0 4,-1.9 3,-0.2 -1,-0.2 0.823 114.8 58.7 -51.6 -32.7 2.6 -2.7 -7.4 40 35 A F H X S+ 0 0 137 -4,-2.6 4,-0.8 -5,-0.4 -2,-0.2 0.997 117.1 25.9 -60.7 -70.3 6.1 -2.0 -8.5 41 36 A A H >X S+ 0 0 17 -4,-2.4 3,-1.4 1,-0.2 4,-0.5 0.925 121.5 56.7 -60.7 -47.0 8.0 -2.7 -5.3 42 37 A A H ><>S+ 0 0 0 -4,-3.3 5,-2.5 -5,-0.4 3,-1.6 0.872 98.8 61.5 -53.0 -40.1 5.3 -5.1 -4.1 43 38 A E H ><5S+ 0 0 127 -4,-1.9 3,-0.6 -5,-0.4 -1,-0.3 0.829 107.4 44.2 -56.6 -33.2 5.8 -7.1 -7.2 44 39 A E H <<5S+ 0 0 145 -3,-1.4 -1,-0.3 -4,-0.8 -2,-0.2 0.459 105.3 64.8 -90.1 -3.1 9.4 -7.7 -6.1 45 40 A F T <<5S- 0 0 61 -3,-1.6 -1,-0.2 -4,-0.5 -2,-0.2 0.059 119.6-103.9-106.0 22.9 8.2 -8.5 -2.6 46 41 A K T < 5S+ 0 0 194 -3,-0.6 -3,-0.2 1,-0.1 -2,-0.1 0.721 96.7 108.9 62.6 20.3 6.3 -11.6 -3.6 47 42 A V < - 0 0 13 -5,-2.5 -2,-0.2 -6,-0.2 -3,-0.1 -0.762 52.1-169.1-131.7 87.6 3.1 -9.5 -3.2 48 43 A P - 0 0 57 0, 0.0 -8,-0.1 0, 0.0 34,-0.1 -0.168 17.5-155.8 -69.8 166.3 1.5 -8.7 -6.6 49 44 A A S S+ 0 0 30 -10,-0.1 5,-0.1 2,-0.1 -10,-0.1 0.503 81.3 74.9-119.2 -13.9 -1.3 -6.1 -7.0 50 45 A A S S+ 0 0 106 1,-0.1 -11,-0.0 -11,-0.1 3,-0.0 0.946 120.6 10.2 -65.1 -50.7 -2.9 -7.5 -10.2 51 46 A T S S+ 0 0 122 2,-0.1 33,-0.6 33,-0.0 34,-0.5 0.658 127.1 67.0-101.4 -23.1 -4.6 -10.5 -8.5 52 47 A S E S-C 83 0A 12 31,-0.2 2,-0.2 32,-0.1 -5,-0.0 -0.530 73.8-133.9 -96.6 165.1 -3.9 -9.3 -4.9 53 48 A A E -C 82 0A 28 29,-2.3 29,-2.6 -2,-0.2 2,-0.4 -0.698 9.2-130.2-115.0 168.2 -5.3 -6.3 -3.0 54 49 A I E +C 81 0A 24 -2,-0.2 2,-0.3 27,-0.2 8,-0.3 -0.973 29.9 161.2-124.3 134.2 -3.8 -3.6 -0.8 55 50 A I E -C 80 0A 37 25,-2.3 25,-3.0 -2,-0.4 6,-0.1 -0.945 32.9-108.2-144.8 164.7 -5.1 -2.5 2.6 56 51 A T E -C 79 0A 11 4,-0.5 23,-0.2 -2,-0.3 -43,-0.0 -0.156 51.5 -81.0 -84.5-177.1 -3.9 -0.7 5.7 57 52 A N S S+ 0 0 80 21,-0.9 22,-0.1 1,-0.3 -1,-0.0 0.902 136.6 38.0 -51.3 -46.0 -3.1 -2.1 9.2 58 53 A D S S- 0 0 151 2,-0.0 -1,-0.3 0, 0.0 21,-0.1 0.784 123.4-108.2 -76.6 -28.6 -6.8 -2.1 10.0 59 54 A G + 0 0 42 1,-0.2 2,-0.3 21,-0.0 -2,-0.1 0.846 55.2 159.1 97.6 81.2 -7.7 -3.2 6.5 60 55 A I - 0 0 92 0, 0.0 -4,-0.5 0, 0.0 -1,-0.2 -0.974 40.6-102.8-135.1 148.7 -9.4 -0.5 4.4 61 56 A G - 0 0 61 -2,-0.3 2,-0.3 -6,-0.1 -6,-0.1 -0.245 34.1-154.1 -66.4 155.8 -9.8 0.1 0.7 62 57 A I - 0 0 31 -8,-0.3 -8,-0.1 -7,-0.0 9,-0.0 -0.979 16.3-123.3-135.2 147.0 -7.7 2.6 -1.2 63 58 A N > - 0 0 102 -2,-0.3 3,-1.4 1,-0.1 -29,-0.1 -0.788 15.0-168.0 -93.5 108.2 -8.1 4.6 -4.4 64 59 A P T 3 S+ 0 0 69 0, 0.0 -29,-0.4 0, 0.0 -28,-0.2 0.549 81.6 77.0 -69.6 -6.6 -5.3 3.9 -6.9 65 60 A A T 3 S+ 0 0 96 -31,-0.1 2,-0.2 -30,-0.1 -2,-0.0 0.331 87.1 77.9 -86.0 7.7 -6.5 6.9 -8.8 66 61 A Q S < S- 0 0 54 -3,-1.4 -32,-0.8 1,-0.1 -31,-0.4 -0.595 83.1-104.8-110.9 173.6 -4.8 9.2 -6.3 67 62 A T B > -D 33 0B 52 -2,-0.2 4,-2.4 -34,-0.2 5,-0.3 -0.498 37.8 -98.0 -95.2 166.6 -1.2 10.2 -5.7 68 63 A A H > S+ 0 0 1 -36,-2.2 4,-1.7 1,-0.2 -38,-0.2 0.835 124.6 55.2 -50.6 -35.1 1.2 9.1 -2.9 69 64 A G H > S+ 0 0 10 -39,-2.1 4,-1.9 2,-0.2 -1,-0.2 0.951 107.4 45.5 -65.1 -51.1 0.2 12.2 -1.1 70 65 A N H > S+ 0 0 76 -40,-0.3 4,-2.2 1,-0.2 5,-0.2 0.874 118.4 44.2 -60.5 -38.5 -3.5 11.6 -1.1 71 66 A V H X>S+ 0 0 0 -4,-2.4 4,-1.1 1,-0.2 5,-0.9 0.756 112.7 52.3 -77.3 -25.5 -2.9 8.0 -0.1 72 67 A F H <5S+ 0 0 60 -4,-1.7 -2,-0.2 -5,-0.3 -1,-0.2 0.746 115.5 40.8 -81.0 -25.3 -0.3 9.0 2.5 73 68 A L H <5S+ 0 0 139 -4,-1.9 -2,-0.2 -5,-0.1 -3,-0.2 0.919 115.1 47.2 -86.8 -52.3 -2.7 11.5 4.1 74 69 A K H <5S+ 0 0 149 -4,-2.2 -3,-0.2 -5,-0.2 -2,-0.1 0.954 133.8 16.7 -54.0 -56.0 -6.0 9.5 4.0 75 70 A H T <5S- 0 0 49 -4,-1.1 -3,-0.2 -5,-0.2 3,-0.1 0.956 98.8-134.0 -82.8 -60.6 -4.3 6.4 5.5 76 71 A G < - 0 0 20 -5,-0.9 -1,-0.1 1,-0.1 3,-0.1 -0.518 48.9 -62.7 141.8 -71.5 -1.1 7.7 6.9 77 72 A S S S+ 0 0 31 1,-0.2 -65,-2.2 -2,-0.1 2,-0.8 0.161 101.6 97.5 179.9 -34.9 1.9 5.6 6.0 78 73 A E E +b 12 0A 94 -3,-0.1 -21,-0.9 -67,-0.1 2,-0.3 -0.667 49.9 149.3 -80.3 108.2 1.5 2.1 7.4 79 74 A L E -bC 13 56A 6 -67,-2.2 -65,-2.9 -2,-0.8 2,-0.3 -0.988 25.7-162.6-141.7 148.9 0.1 -0.1 4.7 80 75 A R E -bC 14 55A 92 -25,-3.0 -25,-2.3 -2,-0.3 2,-0.4 -0.885 10.5-138.6-129.4 160.9 0.3 -3.8 3.8 81 76 A I E + C 0 54A 1 -67,-2.2 -27,-0.2 -2,-0.3 -32,-0.1 -0.958 30.4 146.4-123.7 140.6 -0.4 -5.9 0.7 82 77 A I E - C 0 53A 73 -29,-2.6 -29,-2.3 -2,-0.4 2,-0.1 -0.985 47.3 -84.0-165.2 159.1 -2.1 -9.3 0.4 83 78 A P E - C 0 52A 90 0, 0.0 -31,-0.2 0, 0.0 3,-0.1 -0.382 23.9-166.0 -70.1 144.6 -4.3 -11.5 -1.8 84 79 A R S S+ 0 0 204 -33,-0.6 2,-0.3 1,-0.2 -32,-0.1 0.732 70.8 2.5-100.4 -31.2 -8.1 -11.1 -1.6 85 80 A D - 0 0 132 -34,-0.5 2,-0.3 -32,-0.0 -1,-0.2 -0.906 61.1-149.2-147.9 173.8 -9.1 -14.3 -3.4 86 81 A R + 0 0 215 -2,-0.3 -34,-0.0 1,-0.1 0, 0.0 -0.994 21.6 162.3-150.0 151.7 -7.7 -17.4 -5.1 87 82 A V 0 0 141 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.533 360.0 360.0-136.2 -42.6 -8.5 -19.7 -8.0 88 83 A G 0 0 123 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.508 360.0 360.0-137.2 360.0 -5.4 -21.6 -8.9