==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 15-MAY-05 1X59 . COMPND 2 MOLECULE: HISTIDYL-TRNA SYNTHETASE; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.NAMEKI,A.SASAGAWA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA, . 73 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6969.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 61.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 47.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 91 0, 0.0 2,-0.2 0, 0.0 72,-0.1 0.000 360.0 360.0 360.0 -71.5 0.9 7.2 -10.0 2 2 A S + 0 0 70 70,-0.0 2,-0.3 69,-0.0 70,-0.0 -0.784 360.0 116.1-142.6 97.5 3.1 10.2 -9.0 3 3 A S + 0 0 96 -2,-0.2 0, 0.0 7,-0.1 0, 0.0 -0.979 37.4 38.8-159.5 160.8 0.9 13.2 -9.9 4 4 A G - 0 0 44 -2,-0.3 2,-0.3 1,-0.1 -1,-0.0 0.111 55.0-126.5 83.0 167.0 -0.9 16.3 -8.4 5 5 A S S S- 0 0 116 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.859 81.2 -21.4-149.7 120.7 0.0 18.7 -5.6 6 6 A S S S+ 0 0 138 -2,-0.3 2,-0.4 1,-0.2 3,-0.1 0.684 83.7 152.8 47.6 30.6 -2.4 19.3 -2.7 7 7 A G > - 0 0 21 1,-0.2 4,-1.4 2,-0.0 -1,-0.2 -0.712 36.3-155.5 -67.0 128.1 -5.4 18.1 -4.7 8 8 A M H > S+ 0 0 171 -2,-0.4 4,-2.7 2,-0.2 -1,-0.2 0.921 96.8 48.3 -70.9 -46.3 -7.9 16.9 -2.1 9 9 A A H > S+ 0 0 77 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.910 110.7 51.1 -61.9 -41.1 -9.5 14.6 -4.8 10 10 A E H > S+ 0 0 94 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.896 110.6 49.3 -60.8 -40.0 -6.1 13.4 -5.8 11 11 A R H X S+ 0 0 119 -4,-1.4 4,-2.9 2,-0.2 -2,-0.2 0.914 109.9 51.0 -65.8 -42.0 -5.3 12.6 -2.1 12 12 A A H X S+ 0 0 63 -4,-2.7 4,-2.0 1,-0.2 -2,-0.2 0.919 112.1 46.6 -59.4 -44.5 -8.7 10.7 -1.8 13 13 A A H X S+ 0 0 54 -4,-2.6 4,-1.6 2,-0.2 -1,-0.2 0.819 114.1 48.2 -66.8 -34.0 -7.8 8.7 -5.0 14 14 A L H X S+ 0 0 39 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.906 110.5 50.3 -68.5 -46.3 -4.3 8.0 -3.6 15 15 A E H X S+ 0 0 88 -4,-2.9 4,-3.1 2,-0.2 -2,-0.2 0.840 105.7 58.2 -62.4 -32.8 -5.8 7.0 -0.2 16 16 A E H X S+ 0 0 116 -4,-2.0 4,-3.2 2,-0.2 5,-0.3 0.941 105.7 48.3 -58.7 -48.6 -8.1 4.7 -2.2 17 17 A L H X S+ 0 0 83 -4,-1.6 4,-2.8 2,-0.2 5,-0.3 0.921 112.8 48.7 -58.5 -44.0 -4.9 3.0 -3.6 18 18 A V H X S+ 0 0 14 -4,-2.2 4,-2.7 2,-0.2 -2,-0.2 0.943 115.5 43.7 -59.4 -50.0 -3.6 2.8 0.0 19 19 A K H X S+ 0 0 123 -4,-3.1 4,-2.7 2,-0.2 -2,-0.2 0.948 117.7 43.5 -57.3 -58.0 -6.9 1.3 1.2 20 20 A L H X S+ 0 0 71 -4,-3.2 4,-2.8 2,-0.2 -2,-0.2 0.849 115.5 48.8 -64.9 -38.2 -7.3 -1.1 -1.7 21 21 A Q H X S+ 0 0 35 -4,-2.8 4,-2.9 -5,-0.3 -1,-0.2 0.941 114.9 45.8 -62.4 -48.1 -3.7 -2.1 -1.6 22 22 A G H X S+ 0 0 25 -4,-2.7 4,-1.6 -5,-0.3 -2,-0.2 0.833 115.4 46.4 -66.6 -37.5 -4.0 -2.7 2.2 23 23 A E H X S+ 0 0 115 -4,-2.7 4,-2.9 2,-0.2 -2,-0.2 0.935 113.3 48.7 -68.0 -47.0 -7.3 -4.6 1.8 24 24 A R H X S+ 0 0 164 -4,-2.8 4,-3.3 1,-0.2 -2,-0.2 0.949 111.7 50.0 -60.0 -47.2 -5.9 -6.7 -1.0 25 25 A V H X S+ 0 0 7 -4,-2.9 4,-2.3 2,-0.2 -1,-0.2 0.869 110.7 49.4 -54.8 -43.6 -2.8 -7.5 1.1 26 26 A R H X S+ 0 0 191 -4,-1.6 4,-2.0 2,-0.2 -1,-0.2 0.953 113.2 47.3 -63.1 -48.2 -5.0 -8.5 4.0 27 27 A G H X S+ 0 0 25 -4,-2.9 4,-3.0 2,-0.2 -2,-0.2 0.942 110.2 52.6 -53.5 -50.4 -7.0 -10.7 1.7 28 28 A L H <>S+ 0 0 10 -4,-3.3 5,-2.0 1,-0.3 4,-0.4 0.881 107.9 50.4 -58.5 -43.5 -3.7 -12.2 0.2 29 29 A K H ><5S+ 0 0 126 -4,-2.3 3,-0.6 1,-0.2 -1,-0.3 0.896 117.2 41.6 -60.5 -41.2 -2.4 -13.1 3.7 30 30 A Q H 3<5S+ 0 0 171 -4,-2.0 -2,-0.2 -3,-0.2 -1,-0.2 0.887 112.1 55.1 -65.5 -43.2 -5.8 -14.8 4.4 31 31 A Q T 3<5S- 0 0 123 -4,-3.0 -1,-0.2 -5,-0.2 -2,-0.2 0.356 106.2-122.3 -80.2 2.2 -6.0 -16.4 0.9 32 32 A K T < 5 + 0 0 192 -3,-0.6 -3,-0.2 -4,-0.4 3,-0.1 0.925 52.6 166.7 43.7 50.6 -2.6 -18.2 1.2 33 33 A A < - 0 0 25 -5,-2.0 -1,-0.1 1,-0.2 2,-0.0 -0.344 53.6 -55.6 -70.2 173.0 -1.4 -16.4 -2.0 34 34 A S >> - 0 0 81 1,-0.2 4,-2.5 -2,-0.1 3,-0.8 -0.306 42.4-147.0 -48.4 120.5 2.3 -16.4 -2.8 35 35 A A H 3> S+ 0 0 74 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.801 102.6 62.3 -57.4 -29.2 4.2 -15.0 0.2 36 36 A E H 34 S+ 0 0 178 2,-0.2 4,-0.4 1,-0.2 -1,-0.2 0.748 107.1 40.6 -70.3 -29.8 6.6 -13.7 -2.5 37 37 A L H X> S+ 0 0 80 -3,-0.8 4,-2.9 2,-0.1 3,-0.6 0.879 110.0 60.7 -80.3 -47.4 3.7 -11.6 -3.9 38 38 A I H 3X S+ 0 0 18 -4,-2.5 4,-2.2 1,-0.3 5,-0.2 0.922 106.3 44.4 -45.8 -59.6 2.5 -10.6 -0.4 39 39 A E H 3X S+ 0 0 150 -4,-2.3 4,-1.5 1,-0.2 -1,-0.3 0.756 114.6 50.4 -63.4 -24.5 5.8 -8.9 0.5 40 40 A E H <> S+ 0 0 110 -3,-0.6 4,-2.2 -4,-0.4 -1,-0.2 0.899 112.6 45.0 -76.6 -41.0 6.0 -7.2 -2.9 41 41 A E H X S+ 0 0 41 -4,-2.9 4,-1.7 2,-0.2 -2,-0.2 0.770 113.4 52.1 -72.2 -27.1 2.4 -5.9 -2.5 42 42 A V H X S+ 0 0 38 -4,-2.2 4,-1.7 -5,-0.3 -2,-0.2 0.833 107.3 51.7 -73.4 -38.4 3.3 -4.9 1.1 43 43 A A H X S+ 0 0 28 -4,-1.5 4,-3.0 2,-0.2 -2,-0.2 0.906 110.8 48.1 -66.1 -39.2 6.4 -3.0 -0.3 44 44 A K H X S+ 0 0 72 -4,-2.2 4,-2.7 2,-0.2 5,-0.3 0.914 108.6 53.5 -63.9 -39.7 4.0 -1.2 -2.7 45 45 A L H X S+ 0 0 34 -4,-1.7 4,-1.4 1,-0.2 -2,-0.2 0.830 112.7 45.3 -61.4 -33.5 1.7 -0.6 0.4 46 46 A L H X S+ 0 0 121 -4,-1.7 4,-2.5 2,-0.2 -2,-0.2 0.938 112.6 49.7 -69.6 -54.1 4.9 1.0 2.0 47 47 A K H < S+ 0 0 92 -4,-3.0 4,-0.2 2,-0.2 -2,-0.2 0.939 113.0 46.1 -52.4 -55.3 5.9 3.0 -1.2 48 48 A L H >X S+ 0 0 28 -4,-2.7 3,-2.4 1,-0.2 4,-1.6 0.945 113.5 47.6 -57.4 -53.6 2.4 4.5 -1.6 49 49 A K H 3X S+ 0 0 101 -4,-1.4 4,-2.8 1,-0.3 -1,-0.2 0.886 105.3 61.5 -55.4 -37.5 2.0 5.4 2.1 50 50 A A H 3< S+ 0 0 74 -4,-2.5 -1,-0.3 1,-0.2 -2,-0.2 0.451 104.5 49.0 -70.6 -2.9 5.5 6.9 1.9 51 51 A Q H <4 S+ 0 0 109 -3,-2.4 -1,-0.2 -4,-0.2 -2,-0.2 0.733 111.4 47.6 -94.8 -42.3 4.1 9.4 -0.7 52 52 A L H < S- 0 0 20 -4,-1.6 -2,-0.2 -38,-0.1 -3,-0.1 0.948 115.3-118.0 -56.2 -52.2 1.0 10.3 1.4 53 53 A G < - 0 0 47 -4,-2.8 -3,-0.2 -5,-0.1 -4,-0.1 0.695 29.1-137.2 104.7 89.0 3.3 10.9 4.5 54 54 A P - 0 0 81 0, 0.0 2,-0.1 0, 0.0 -4,-0.0 -0.148 28.8 -82.6 -73.5 168.9 2.3 8.4 7.3 55 55 A D - 0 0 149 1,-0.1 2,-2.2 2,-0.0 -2,-0.1 -0.415 46.2-104.1 -70.7 149.7 2.0 9.3 11.1 56 56 A E + 0 0 191 -2,-0.1 2,-2.1 1,-0.1 -1,-0.1 -0.432 41.4 179.9 -76.5 68.3 5.2 9.4 13.2 57 57 A S - 0 0 105 -2,-2.2 -1,-0.1 1,-0.1 -2,-0.0 -0.496 67.8 -44.5 -77.1 79.4 4.7 6.0 15.0 58 58 A K S S- 0 0 164 -2,-2.1 -1,-0.1 2,-0.0 0, 0.0 0.463 85.9 -67.4 63.6 154.7 8.0 6.4 17.0 59 59 A Q + 0 0 152 1,-0.1 0, 0.0 -3,-0.1 0, 0.0 -0.061 49.5 167.3 -62.4 164.2 11.4 7.6 15.5 60 60 A K - 0 0 167 2,-0.1 -1,-0.1 0, 0.0 3,-0.1 0.432 15.2-174.6-144.2 -69.0 13.3 5.5 13.0 61 61 A F + 0 0 199 1,-0.2 2,-0.3 2,-0.0 -2,-0.1 0.715 25.1 165.6 53.0 27.5 16.2 7.1 11.1 62 62 A V - 0 0 122 1,-0.1 -1,-0.2 0, 0.0 -2,-0.1 -0.591 35.1-126.2 -62.7 125.5 16.6 3.9 9.0 63 63 A L - 0 0 162 -2,-0.3 2,-0.3 -3,-0.1 -1,-0.1 -0.057 23.0-148.6 -67.4 174.8 18.8 5.1 6.1 64 64 A K - 0 0 172 1,-0.1 -1,-0.1 4,-0.0 3,-0.1 -0.916 26.9 -81.3-137.0 167.1 18.1 4.7 2.3 65 65 A T S > S- 0 0 87 -2,-0.3 2,-1.6 1,-0.1 3,-0.5 -0.157 72.7 -71.8 -55.6 160.1 19.8 4.1 -1.0 66 66 A P T 3 S- 0 0 127 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.446 96.5 -50.4 -73.7 89.0 21.2 7.3 -2.6 67 67 A K T 3 S+ 0 0 190 -2,-1.6 -2,-0.0 1,-0.1 0, 0.0 0.921 75.0 178.0 46.7 56.2 18.0 9.1 -3.7 68 68 A S < - 0 0 71 -3,-0.5 -1,-0.1 1,-0.1 -4,-0.0 0.821 16.0-158.6 -55.9 -34.9 16.7 5.9 -5.4 69 69 A G - 0 0 62 1,-0.2 2,-1.2 2,-0.0 -1,-0.1 0.895 6.9-161.4 52.4 52.8 13.4 7.7 -6.4 70 70 A P + 0 0 74 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.491 23.9 159.1 -70.8 95.6 11.4 4.4 -6.9 71 71 A S - 0 0 79 -2,-1.2 2,-0.3 -69,-0.0 -24,-0.0 0.169 26.8-138.0 -85.3-152.7 8.4 5.5 -9.0 72 72 A S 0 0 102 -70,-0.0 -70,-0.0 -2,-0.0 -1,-0.0 -0.952 360.0 360.0-163.4 167.4 6.4 2.9 -11.1 73 73 A G 0 0 120 -2,-0.3 -2,-0.0 -72,-0.1 0, 0.0 -0.867 360.0 360.0 148.7 360.0 4.8 2.6 -14.5