==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 17-MAY-05 1X61 . COMPND 2 MOLECULE: THYROID RECEPTOR INTERACTING PROTEIN 6; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.R.QIN,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5454.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 45.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 12.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 120 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-136.4 -16.5 0.5 14.8 2 2 A S + 0 0 140 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.966 360.0 59.4 -56.9 -57.5 -20.0 0.3 13.2 3 3 A S S S+ 0 0 114 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.200 70.1 103.3 -69.5 164.5 -19.6 3.6 11.2 4 4 A G - 0 0 74 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.430 52.2-121.0 134.9 150.3 -16.8 4.0 8.7 5 5 A S - 0 0 120 -2,-0.2 2,-0.1 2,-0.0 -2,-0.0 -0.965 18.9-147.3-125.6 140.2 -16.1 4.1 4.9 6 6 A S + 0 0 53 -2,-0.4 2,-0.2 2,-0.0 8,-0.1 -0.445 22.2 160.1 -97.4 173.0 -13.8 1.9 2.9 7 7 A G - 0 0 23 -2,-0.1 2,-0.8 8,-0.1 21,-0.3 -0.769 37.9-118.7 170.9 142.7 -11.8 2.7 -0.3 8 8 A C - 0 0 2 5,-1.6 4,-0.4 4,-0.7 21,-0.2 -0.836 14.5-158.8 -98.4 109.0 -8.8 1.6 -2.4 9 9 A G S S+ 0 0 34 19,-3.0 20,-0.2 -2,-0.8 -1,-0.2 0.795 91.2 52.8 -53.9 -29.3 -6.2 4.3 -2.6 10 10 A G S S- 0 0 51 18,-0.4 -1,-0.2 3,-0.1 19,-0.1 0.996 133.7 -0.2 -70.2 -74.2 -4.9 2.5 -5.7 11 11 A C S S- 0 0 81 2,-0.1 -2,-0.1 1,-0.0 3,-0.1 0.909 93.5-124.4 -83.6 -48.0 -8.0 2.2 -8.0 12 12 A G + 0 0 44 1,-0.4 -4,-0.7 -4,-0.4 3,-0.1 -0.115 65.7 124.2 129.8 -37.6 -10.5 3.8 -5.7 13 13 A E S S- 0 0 152 -6,-0.2 -5,-1.6 1,-0.1 -1,-0.4 -0.073 73.2 -87.1 -52.7 155.6 -13.2 1.1 -5.4 14 14 A D - 0 0 92 -7,-0.3 2,-0.8 -8,-0.1 -1,-0.1 -0.359 37.1-128.0 -67.5 145.3 -14.1 -0.0 -1.9 15 15 A V + 0 0 17 -3,-0.1 2,-0.3 -2,-0.1 -8,-0.1 -0.849 51.3 131.7-101.1 107.4 -12.1 -2.8 -0.4 16 16 A V + 0 0 122 -2,-0.8 5,-0.1 3,-0.1 -2,-0.0 -0.941 8.4 143.7-157.6 131.6 -14.2 -5.7 0.9 17 17 A G S S- 0 0 38 -2,-0.3 4,-0.1 3,-0.3 -1,-0.1 -0.053 82.5 -72.2-163.1 47.4 -14.1 -9.5 0.5 18 18 A D S S- 0 0 173 1,-0.1 -2,-0.1 2,-0.1 0, 0.0 0.883 124.4 -10.2 61.2 39.7 -15.2 -11.2 3.7 19 19 A G S S+ 0 0 85 1,-0.3 2,-0.4 0, 0.0 -1,-0.1 0.802 104.4 130.0 106.5 46.2 -11.9 -10.2 5.4 20 20 A A + 0 0 56 -5,-0.1 -1,-0.3 2,-0.0 -3,-0.3 -0.979 17.8 102.0-132.4 144.0 -9.7 -8.8 2.6 21 21 A G - 0 0 37 -2,-0.4 2,-0.6 -5,-0.1 9,-0.2 -0.398 50.7-125.9 148.9 133.0 -7.7 -5.6 2.3 22 22 A V E -A 29 0A 19 7,-2.5 7,-3.0 -2,-0.1 2,-0.6 -0.882 22.0-158.8-104.2 114.7 -4.1 -4.4 2.5 23 23 A V E +A 28 0A 109 -2,-0.6 2,-0.3 5,-0.2 5,-0.2 -0.817 26.0 150.9 -95.7 120.2 -3.6 -1.5 4.9 24 24 A A + 0 0 9 3,-1.6 3,-0.4 -2,-0.6 -2,-0.0 -0.979 61.0 6.1-151.3 135.1 -0.4 0.5 4.3 25 25 A L S S- 0 0 67 -2,-0.3 3,-0.1 1,-0.2 -1,-0.1 0.899 129.1 -58.3 61.6 42.1 0.6 4.2 4.9 26 26 A D S S+ 0 0 169 1,-0.2 2,-0.3 -3,-0.1 -1,-0.2 0.823 122.5 97.4 57.8 32.0 -2.7 4.8 6.7 27 27 A R S S- 0 0 149 -3,-0.4 -3,-1.6 2,-0.0 2,-0.4 -0.833 71.1-117.7-139.6 176.9 -4.5 3.7 3.6 28 28 A V E +A 23 0A 41 -21,-0.3 -19,-3.0 -2,-0.3 -18,-0.4 -0.983 29.8 172.2-126.8 129.0 -6.2 0.7 2.0 29 29 A F E -A 22 0A 35 -7,-3.0 -7,-2.5 -2,-0.4 2,-0.2 -0.951 35.1-103.8-134.2 153.5 -5.2 -1.1 -1.2 30 30 A H > - 0 0 50 -2,-0.3 4,-2.7 -9,-0.2 14,-0.0 -0.539 34.5-114.2 -77.4 138.9 -6.2 -4.2 -3.0 31 31 A V T 4 S+ 0 0 75 1,-0.2 13,-0.4 -2,-0.2 12,-0.2 0.788 121.3 41.4 -39.5 -32.7 -3.9 -7.2 -2.7 32 32 A G T 4 S+ 0 0 37 11,-0.1 -1,-0.2 10,-0.1 11,-0.2 0.922 114.0 47.9 -83.8 -49.3 -3.4 -6.7 -6.4 33 33 A C T 4 S+ 0 0 53 9,-0.1 2,-0.6 1,-0.1 -2,-0.2 0.948 91.4 86.7 -56.4 -52.9 -3.2 -3.0 -6.6 34 34 A F < + 0 0 8 -4,-2.7 9,-1.6 8,-0.1 2,-0.3 -0.326 65.9 129.8 -54.6 102.8 -0.7 -2.8 -3.7 35 35 A V B -B 42 0B 37 -2,-0.6 20,-0.3 7,-0.2 7,-0.2 -0.940 59.9 -72.8-150.8 170.7 2.6 -3.2 -5.6 36 36 A C - 0 0 1 5,-1.6 20,-0.2 -2,-0.3 -1,-0.1 -0.092 30.0-137.1 -62.4 166.3 6.1 -1.8 -6.0 37 37 A S S S+ 0 0 28 18,-1.5 19,-0.1 3,-0.1 -1,-0.1 0.633 98.6 33.6 -99.8 -19.9 6.7 1.5 -7.9 38 38 A T S S+ 0 0 87 17,-0.3 18,-0.1 3,-0.0 -2,-0.0 0.876 137.9 14.3 -98.0 -67.3 9.7 0.3 -9.8 39 39 A C S S- 0 0 68 18,-0.1 -2,-0.1 2,-0.0 17,-0.1 0.625 91.7-138.1 -85.0 -15.0 9.3 -3.4 -10.5 40 40 A R + 0 0 176 15,-0.2 2,-0.2 1,-0.2 -3,-0.1 0.910 38.6 174.2 57.5 44.7 5.6 -3.3 -9.6 41 41 A A - 0 0 34 1,-0.1 -5,-1.6 2,-0.0 2,-0.6 -0.488 42.7 -90.6 -83.0 153.7 5.9 -6.6 -7.7 42 42 A Q B +B 35 0B 107 -7,-0.2 3,-0.3 1,-0.2 -7,-0.2 -0.502 44.8 172.7 -66.9 110.8 3.0 -8.1 -5.7 43 43 A L > + 0 0 0 -9,-1.6 3,-0.7 -2,-0.6 -8,-0.2 0.142 35.9 125.7-104.8 17.3 3.4 -6.7 -2.2 44 44 A R T 3 S+ 0 0 161 -13,-0.4 -1,-0.2 1,-0.3 2,-0.1 0.836 93.5 2.9 -43.2 -38.7 0.1 -8.1 -1.0 45 45 A G T 3 S+ 0 0 66 -3,-0.3 2,-0.3 -14,-0.1 -1,-0.3 -0.559 108.0 82.8-155.7 84.8 2.1 -9.8 1.7 46 46 A Q S < S- 0 0 78 -3,-0.7 2,-0.5 -2,-0.1 -3,-0.0 -0.967 78.9 -65.9-167.8 176.7 5.8 -9.1 2.0 47 47 A H + 0 0 118 -2,-0.3 11,-1.6 10,-0.0 2,-0.2 -0.675 60.0 157.9 -82.0 122.2 8.5 -6.8 3.3 48 48 A F E -C 57 0C 80 -2,-0.5 9,-0.3 9,-0.2 2,-0.2 -0.807 29.9-125.9-135.5 176.0 8.5 -3.4 1.6 49 49 A Y E -C 56 0C 89 7,-2.2 7,-1.3 -2,-0.2 2,-0.4 -0.698 11.3-132.8-120.5 173.4 9.6 0.2 2.1 50 50 A A E +C 55 0C 61 -2,-0.2 2,-0.4 5,-0.2 5,-0.2 -0.931 31.9 156.1-134.5 110.5 8.0 3.7 2.0 51 51 A V S S- 0 0 58 3,-0.7 3,-0.1 -2,-0.4 -2,-0.1 -0.969 72.5 -9.5-138.8 121.1 9.6 6.6 0.1 52 52 A E S S- 0 0 161 -2,-0.4 -1,-0.1 1,-0.2 3,-0.1 0.889 128.7 -55.0 62.5 40.2 7.8 9.6 -1.3 53 53 A R S S+ 0 0 210 1,-0.2 2,-0.2 -3,-0.0 -1,-0.2 0.859 117.5 114.6 61.6 36.1 4.4 8.0 -0.5 54 54 A R - 0 0 125 -3,-0.1 -3,-0.7 2,-0.0 2,-0.5 -0.752 65.6-117.3-128.6 175.6 5.4 5.0 -2.6 55 55 A A E -C 50 0C 10 -20,-0.3 -18,-1.5 -2,-0.2 2,-0.5 -0.970 26.0-179.9-122.8 121.2 6.1 1.3 -2.1 56 56 A Y E -C 49 0C 29 -7,-1.3 -7,-2.2 -2,-0.5 -20,-0.0 -0.969 25.3-129.3-124.4 119.5 9.5 -0.3 -2.8 57 57 A C E >> -C 48 0C 14 -2,-0.5 4,-2.2 -9,-0.3 3,-0.6 -0.345 32.3-106.2 -64.6 142.0 10.2 -4.0 -2.2 58 58 A E H 3> S+ 0 0 82 -11,-1.6 4,-1.9 1,-0.3 5,-0.2 0.841 122.0 55.2 -32.9 -51.4 13.2 -4.8 -0.2 59 59 A G H 3> S+ 0 0 51 2,-0.2 4,-1.7 1,-0.2 3,-0.4 0.948 113.3 38.2 -50.5 -58.4 14.9 -5.9 -3.4 60 60 A C H X> S+ 0 0 14 -3,-0.6 4,-3.0 1,-0.2 3,-0.9 0.970 109.3 60.3 -58.5 -57.7 14.4 -2.6 -5.1 61 61 A Y H 3X S+ 0 0 77 -4,-2.2 4,-0.8 1,-0.3 -1,-0.2 0.818 111.4 43.5 -39.5 -37.7 15.0 -0.4 -2.1 62 62 A V H 3X S+ 0 0 65 -4,-1.9 4,-1.0 -5,-0.4 -1,-0.3 0.828 112.3 52.1 -79.4 -33.9 18.4 -2.0 -2.0 63 63 A A H < S+ 0 0 69 -4,-3.0 3,-0.9 1,-0.2 4,-0.4 0.880 98.8 60.6 -54.7 -40.7 18.0 2.1 -5.8 65 65 A L H >< S+ 0 0 72 -4,-0.8 3,-2.5 -5,-0.3 -1,-0.2 0.936 89.8 68.1 -52.9 -51.9 20.9 2.7 -3.4 66 66 A E H 3< S+ 0 0 135 -4,-1.0 -1,-0.3 1,-0.3 -2,-0.2 0.835 83.2 76.4 -35.6 -45.4 23.5 1.4 -5.9 67 67 A S T << S- 0 0 122 -3,-0.9 -1,-0.3 -4,-0.8 -2,-0.2 0.854 119.8 -39.3 -34.9 -51.6 22.6 4.5 -7.9 68 68 A G < - 0 0 29 -3,-2.5 -1,-0.2 -4,-0.4 -2,-0.0 -0.826 37.4-135.9 178.5 140.4 24.8 6.5 -5.5 69 69 A P S S+ 0 0 117 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 0.872 80.9 92.4 -69.7 -38.9 25.6 6.9 -1.8 70 70 A S S S+ 0 0 98 1,-0.2 -2,-0.1 2,-0.2 0, 0.0 -0.074 84.6 28.1 -54.2 157.5 25.4 10.7 -1.8 71 71 A S 0 0 136 1,-0.3 -1,-0.2 0, 0.0 -3,-0.0 0.890 360.0 360.0 54.6 42.1 22.1 12.3 -1.0 72 72 A G 0 0 87 -3,-0.3 -1,-0.3 0, 0.0 -2,-0.2 0.149 360.0 360.0 71.4 360.0 21.2 9.3 1.2