==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 17-MAY-05 1X65 . COMPND 2 MOLECULE: UNR PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.K.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE, . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7102.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 48.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 19.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 12.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 41.2 0.9 -1.7 -2.2 2 2 A S + 0 0 131 1,-0.3 2,-0.3 0, 0.0 0, 0.0 0.842 360.0 26.0-102.0 -55.7 4.2 -3.6 -1.8 3 3 A S S S- 0 0 119 2,-0.0 2,-0.6 0, 0.0 -1,-0.3 -0.815 79.7-115.9-113.0 153.0 5.3 -4.5 -5.3 4 4 A G - 0 0 85 -2,-0.3 2,-0.6 -3,-0.1 0, 0.0 -0.778 28.0-171.5 -92.3 121.5 4.5 -2.9 -8.6 5 5 A S + 0 0 87 -2,-0.6 2,-0.3 3,-0.0 3,-0.1 -0.939 12.4 165.9-116.6 114.4 2.5 -5.0 -11.0 6 6 A S + 0 0 111 -2,-0.6 -2,-0.0 1,-0.1 0, 0.0 -0.891 40.3 57.7-125.7 155.9 2.0 -3.8 -14.6 7 7 A G + 0 0 55 -2,-0.3 2,-0.4 1,-0.1 -1,-0.1 0.918 56.6 177.0 90.5 75.5 0.8 -5.3 -17.8 8 8 A R - 0 0 142 -3,-0.1 2,-0.3 44,-0.0 46,-0.2 -0.912 13.7-153.2-114.7 139.0 -2.6 -6.8 -17.4 9 9 A E E -A 53 0A 92 44,-1.8 44,-1.4 -2,-0.4 2,-0.3 -0.829 6.2-146.8-110.8 148.8 -4.7 -8.5 -20.2 10 10 A M E +A 52 0A 46 -2,-0.3 16,-1.2 42,-0.2 17,-0.3 -0.821 22.3 161.7-113.5 153.3 -8.5 -8.7 -20.4 11 11 A G E -AB 51 25A 0 40,-0.9 40,-1.1 -2,-0.3 2,-0.4 -0.990 35.2-104.8-162.9 163.6 -10.7 -11.5 -21.9 12 12 A V E - B 0 24A 30 12,-2.2 12,-2.5 -2,-0.3 2,-0.3 -0.775 39.0-109.6 -99.0 140.4 -14.1 -13.0 -22.0 13 13 A I E + B 0 23A 5 36,-0.5 35,-1.5 -2,-0.4 10,-0.3 -0.510 32.5 177.6 -69.4 123.8 -15.1 -16.2 -20.2 14 14 A A E + 0 0 48 8,-1.6 2,-0.3 -2,-0.3 -1,-0.2 0.617 69.5 9.3 -99.7 -18.2 -15.6 -19.0 -22.7 15 15 A A E - B 0 22A 16 7,-1.0 7,-2.3 31,-0.1 -1,-0.3 -0.981 45.0-170.0-161.0 149.8 -16.3 -21.7 -20.1 16 16 A M - 0 0 43 -2,-0.3 3,-0.3 5,-0.3 5,-0.3 -0.176 24.7-176.2-136.1 41.1 -16.9 -22.0 -16.3 17 17 A R > - 0 0 140 1,-0.2 3,-1.6 2,-0.1 2,-1.5 0.081 49.8 -80.1 -37.5 150.5 -16.7 -25.8 -15.8 18 18 A D T 3 S+ 0 0 156 1,-0.3 -1,-0.2 3,-0.0 3,-0.1 -0.393 124.8 10.4 -61.2 90.2 -17.5 -26.9 -12.2 19 19 A G T 3 S+ 0 0 43 -2,-1.5 17,-0.8 1,-0.4 -1,-0.3 0.034 134.9 16.3 128.3 -26.6 -14.1 -26.1 -10.7 20 20 A F B < -D 35 0B 68 -3,-1.6 -1,-0.4 15,-0.2 2,-0.2 -0.800 57.3-179.5-153.5-166.2 -12.4 -24.2 -13.6 21 21 A G - 0 0 0 13,-0.7 13,-0.4 -5,-0.3 2,-0.3 -0.872 24.4 -96.3-173.8-153.2 -13.1 -22.3 -16.8 22 22 A F E -B 15 0A 51 -7,-2.3 -8,-1.6 -2,-0.2 -7,-1.0 -0.992 10.4-152.7-155.2 149.1 -11.5 -20.4 -19.7 23 23 A I E -B 13 0A 1 -2,-0.3 2,-0.7 -10,-0.3 -10,-0.3 -0.868 14.1-150.5-129.9 99.3 -10.8 -16.8 -20.7 24 24 A K E -B 12 0A 83 -12,-2.5 -12,-2.2 -2,-0.5 7,-0.2 -0.559 21.9-136.2 -71.1 111.4 -10.6 -16.0 -24.4 25 25 A C E -B 11 0A 11 5,-1.2 -14,-0.2 -2,-0.7 -1,-0.1 -0.248 5.8-133.2 -65.9 155.4 -8.2 -13.1 -24.8 26 26 A V S S+ 0 0 60 -16,-1.2 -1,-0.1 1,-0.1 -15,-0.1 0.792 107.1 30.0 -79.7 -29.8 -9.1 -10.3 -27.2 27 27 A D S S+ 0 0 137 -17,-0.3 2,-0.3 1,-0.0 -1,-0.1 0.823 118.1 58.9 -95.7 -41.1 -5.7 -10.3 -28.8 28 28 A R S S- 0 0 158 2,-0.1 -1,-0.0 1,-0.1 0, 0.0 -0.638 71.5-142.0 -92.3 149.4 -4.8 -13.9 -28.4 29 29 A D S S+ 0 0 148 -2,-0.3 2,-0.3 -5,-0.1 -5,-0.1 -0.189 74.4 86.0-101.2 39.9 -6.8 -16.8 -29.8 30 30 A V S S- 0 0 82 -7,-0.1 -5,-1.2 -5,-0.0 -2,-0.1 -0.994 74.8-117.0-141.4 146.6 -6.3 -19.1 -26.8 31 31 A R - 0 0 149 -2,-0.3 2,-0.5 -7,-0.2 -7,-0.2 -0.325 19.5-133.1 -77.6 162.6 -8.0 -19.5 -23.4 32 32 A M - 0 0 30 -9,-0.1 35,-0.2 -2,-0.1 -1,-0.0 -0.780 20.6-135.3-121.4 86.8 -6.3 -18.9 -20.1 33 33 A F - 0 0 94 -2,-0.5 34,-0.5 -11,-0.1 2,-0.3 -0.100 34.0-179.7 -41.3 122.7 -6.9 -21.8 -17.7 34 34 A F - 0 0 2 -13,-0.4 -13,-0.7 32,-0.1 2,-0.3 -0.879 21.1-129.1-129.4 161.2 -7.8 -20.3 -14.4 35 35 A H B > -D 20 0B 107 32,-0.4 3,-1.2 -2,-0.3 2,-1.2 -0.779 25.0-116.3-110.5 155.2 -8.7 -21.6 -10.9 36 36 A F T 3 S+ 0 0 95 -17,-0.8 -16,-0.1 -2,-0.3 -1,-0.0 -0.152 104.6 73.2 -80.8 42.7 -11.6 -20.7 -8.7 37 37 A S T > S+ 0 0 81 -2,-1.2 3,-0.6 2,-0.0 -1,-0.2 0.556 87.1 54.0-125.3 -25.7 -9.2 -19.3 -6.1 38 38 A E G X S+ 0 0 47 -3,-1.2 32,-1.7 1,-0.2 3,-1.0 0.620 89.2 78.8 -86.4 -14.8 -8.1 -16.0 -7.7 39 39 A I G > + 0 0 22 -4,-0.4 3,-2.2 1,-0.3 4,-0.5 0.467 59.1 106.2 -72.0 0.4 -11.7 -14.9 -8.2 40 40 A L G < + 0 0 111 -3,-0.6 -1,-0.3 1,-0.3 -2,-0.1 0.699 50.7 93.9 -53.1 -17.9 -11.5 -13.9 -4.5 41 41 A D G < S- 0 0 69 -3,-1.0 -1,-0.3 29,-0.5 -2,-0.1 0.835 108.8 -97.7 -44.1 -37.9 -11.4 -10.4 -5.8 42 42 A G S < S+ 0 0 46 -3,-2.2 2,-0.2 28,-0.3 -2,-0.1 0.677 80.7 103.7 113.6 82.9 -15.1 -10.3 -5.4 43 43 A N - 0 0 72 -4,-0.5 2,-1.8 28,-0.1 -1,-0.2 -0.555 61.2-127.7 172.3 118.8 -17.3 -11.0 -8.4 44 44 A Q - 0 0 171 -2,-0.2 -5,-0.0 28,-0.0 0, 0.0 -0.552 38.2-149.1 -77.3 84.5 -19.4 -14.0 -9.5 45 45 A L - 0 0 4 -2,-1.8 2,-0.3 -6,-0.1 5,-0.0 0.125 19.4-175.3 -45.4 168.6 -18.0 -14.4 -13.1 46 46 A H > - 0 0 114 -31,-0.0 3,-0.6 4,-0.0 -33,-0.3 -0.978 39.2 -52.6-163.1 167.6 -20.3 -15.7 -15.8 47 47 A I T 3 S+ 0 0 109 -2,-0.3 -33,-0.1 1,-0.2 -31,-0.0 -0.274 126.6 9.4 -51.4 113.8 -20.5 -16.7 -19.4 48 48 A A T 3 S+ 0 0 67 -35,-1.5 2,-0.5 1,-0.2 -1,-0.2 0.950 90.2 151.9 78.2 53.8 -19.0 -13.8 -21.4 49 49 A D < - 0 0 25 -3,-0.6 -36,-0.5 -38,-0.0 -1,-0.2 -0.965 42.8-128.2-122.2 119.3 -17.7 -11.7 -18.4 50 50 A E + 0 0 39 -2,-0.5 23,-1.5 23,-0.2 2,-0.3 -0.352 34.3 177.4 -63.9 139.4 -14.8 -9.3 -18.8 51 51 A V E -AC 11 72A 0 -40,-1.1 -40,-0.9 21,-0.3 2,-0.4 -0.967 23.3-135.7-143.4 158.2 -12.0 -9.8 -16.3 52 52 A E E +AC 10 71A 35 19,-2.2 19,-1.8 -2,-0.3 2,-0.3 -0.964 26.6 165.3-120.8 131.6 -8.6 -8.4 -15.5 53 53 A F E -A 9 0A 6 -44,-1.4 -44,-1.8 -2,-0.4 16,-0.1 -0.999 34.5-145.5-145.5 143.9 -5.5 -10.4 -14.6 54 54 A T - 0 0 36 14,-0.6 -1,-0.1 -2,-0.3 13,-0.1 0.914 37.8-171.3 -73.0 -44.8 -1.7 -9.8 -14.4 55 55 A V - 0 0 23 13,-0.2 12,-0.2 1,-0.1 10,-0.1 0.524 3.6-164.1 60.1 144.0 -0.7 -13.2 -15.5 56 56 A V B -E 66 0C 58 10,-0.7 10,-1.0 7,-0.0 -1,-0.1 -0.969 33.4-124.9-161.9 144.5 2.9 -14.4 -15.4 57 57 A P - 0 0 81 0, 0.0 6,-0.6 0, 0.0 8,-0.1 0.433 60.7-126.7 -69.8 2.5 5.1 -17.2 -16.9 58 58 A D - 0 0 44 4,-0.2 6,-0.0 8,-0.1 7,-0.0 0.121 6.1-123.8 70.5 168.6 6.1 -18.0 -13.3 59 59 A M S S+ 0 0 186 3,-0.1 -1,-0.1 -3,-0.1 0, 0.0 0.737 100.2 40.8-114.4 -50.9 9.6 -18.2 -11.9 60 60 A L S S+ 0 0 178 1,-0.2 -2,-0.1 2,-0.1 0, 0.0 0.980 124.3 37.1 -64.8 -58.4 9.9 -21.7 -10.3 61 61 A S S S- 0 0 87 2,-0.1 -1,-0.2 1,-0.1 -3,-0.1 0.577 91.4-155.2 -70.9 -8.3 8.1 -23.6 -13.1 62 62 A A + 0 0 73 1,-0.1 2,-0.3 2,-0.0 -4,-0.2 0.782 68.3 60.4 35.3 34.8 9.7 -21.2 -15.5 63 63 A Q + 0 0 150 -6,-0.6 -2,-0.1 1,-0.3 -1,-0.1 -0.977 69.8 52.0-170.9 172.5 6.7 -22.1 -17.7 64 64 A R - 0 0 169 -2,-0.3 2,-0.5 1,-0.1 -1,-0.3 0.540 63.3-123.6 61.1 141.9 2.9 -22.0 -18.0 65 65 A N - 0 0 84 -8,-0.1 2,-0.3 -10,-0.1 -1,-0.1 -0.977 26.0-175.5-124.4 124.5 0.9 -18.8 -17.4 66 66 A H B -E 56 0C 59 -10,-1.0 -10,-0.7 -2,-0.5 2,-0.7 -0.897 28.0-118.1-119.2 148.1 -1.9 -18.5 -14.8 67 67 A A - 0 0 2 -34,-0.5 -32,-0.4 -2,-0.3 3,-0.2 -0.748 33.0-162.6 -87.7 114.6 -4.2 -15.6 -14.1 68 68 A I + 0 0 46 -2,-0.7 -14,-0.6 1,-0.2 -13,-0.2 -0.562 62.3 9.4 -94.4 160.0 -3.8 -14.3 -10.6 69 69 A R S S- 0 0 168 -2,-0.2 2,-0.6 1,-0.2 -1,-0.2 0.887 80.1-148.0 34.6 80.8 -6.2 -12.1 -8.6 70 70 A I - 0 0 2 -32,-1.7 2,-0.5 -3,-0.2 -29,-0.5 -0.676 18.8-176.5 -81.4 117.7 -9.1 -12.3 -11.0 71 71 A K E -C 52 0A 75 -19,-1.8 -19,-2.2 -2,-0.6 2,-0.3 -0.956 23.9-130.4-120.4 116.8 -11.1 -9.0 -10.9 72 72 A K E -C 51 0A 71 -2,-0.5 -21,-0.3 -21,-0.2 -22,-0.1 -0.463 24.9-138.2 -65.9 123.8 -14.3 -8.7 -13.0 73 73 A L - 0 0 7 -23,-1.5 -23,-0.2 -2,-0.3 3,-0.1 -0.605 17.7-114.6 -86.4 144.1 -14.3 -5.5 -15.1 74 74 A P >> - 0 0 75 0, 0.0 3,-0.7 0, 0.0 4,-0.6 -0.145 42.7 -79.6 -69.7 168.7 -17.4 -3.4 -15.4 75 75 A K B 34 S+f 78 0D 208 1,-0.2 4,-0.1 2,-0.1 0, 0.0 -0.605 114.3 35.4 -75.3 116.8 -19.3 -2.7 -18.7 76 76 A G T 34 S+ 0 0 57 -2,-0.6 -1,-0.2 2,-0.5 -3,-0.0 -0.190 95.3 77.0 137.4 -44.9 -17.4 -0.1 -20.7 77 77 A T T <4 S+ 0 0 86 -3,-0.7 2,-0.1 -27,-0.0 -2,-0.1 0.977 97.6 42.3 -59.8 -59.6 -13.7 -0.7 -20.0 78 78 A V B < +f 75 0D 11 -4,-0.6 -2,-0.5 -67,-0.0 2,-0.2 -0.478 66.8 152.7 -88.1 160.9 -13.4 -3.7 -22.3 79 79 A S + 0 0 104 -2,-0.1 2,-0.3 -4,-0.1 -53,-0.0 -0.697 3.5 154.3 173.4 131.6 -14.9 -4.1 -25.8 80 80 A F - 0 0 72 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.944 42.4-104.1-166.8 144.0 -14.1 -5.9 -29.0 81 81 A H - 0 0 198 -2,-0.3 2,-0.3 -55,-0.0 -2,-0.0 -0.552 42.7-179.9 -74.9 131.4 -15.9 -7.3 -32.1 82 82 A S - 0 0 68 -2,-0.3 2,-0.1 0, 0.0 -56,-0.0 -0.918 24.1-115.5-131.9 157.7 -16.4 -11.1 -32.1 83 83 A H - 0 0 186 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.480 24.9-136.0 -89.4 162.1 -18.0 -13.6 -34.4 84 84 A S - 0 0 108 -2,-0.1 -1,-0.0 2,-0.0 0, 0.0 -0.868 1.8-147.0-119.5 153.0 -21.0 -15.8 -33.6 85 85 A G - 0 0 68 -2,-0.3 2,-0.8 2,-0.0 -2,-0.0 -0.727 13.0-164.5-122.6 83.4 -21.6 -19.5 -34.2 86 86 A P + 0 0 122 0, 0.0 2,-0.1 0, 0.0 -2,-0.0 -0.536 44.0 113.3 -69.8 105.8 -25.3 -20.1 -34.9 87 87 A S - 0 0 93 -2,-0.8 -2,-0.0 2,-0.1 0, 0.0 -0.440 67.1-116.6-177.6 94.8 -25.9 -23.9 -34.5 88 88 A S 0 0 140 -2,-0.1 0, 0.0 1,-0.0 0, 0.0 0.061 360.0 360.0 -34.6 139.1 -28.0 -25.4 -31.7 89 89 A G 0 0 127 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.751 360.0 360.0 92.3 360.0 -25.9 -27.6 -29.5