==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-AUG-04 1X6J . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN YGFY; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR K.LIM,V.DOSEEVA,E.SARIKAYA DEMIRKAN,S.PULLALAREVU, . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5736.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 73.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 45 51.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 80 0, 0.0 2,-0.2 0, 0.0 43,-0.0 0.000 360.0 360.0 360.0 119.7 25.1 21.2 97.0 2 2 A D > - 0 0 101 42,-0.0 3,-1.4 1,-0.0 7,-0.2 -0.696 360.0 -98.9-119.8-177.9 23.7 22.2 93.6 3 3 A I T 3 S+ 0 0 8 1,-0.3 -1,-0.0 -2,-0.2 6,-0.0 0.553 106.4 52.7 -75.8 -18.9 22.8 25.3 91.7 4 4 A N T 3 S+ 0 0 141 1,-0.1 2,-0.9 2,-0.0 -1,-0.3 0.250 82.5 84.9-104.7 8.1 19.0 25.7 92.2 5 5 A N <> + 0 0 86 -3,-1.4 4,-1.9 1,-0.2 3,-0.2 -0.768 53.9 171.7-105.8 84.9 18.7 25.5 96.0 6 6 A K H > S+ 0 0 74 -2,-0.9 4,-2.7 1,-0.2 -1,-0.2 0.796 70.5 57.4 -61.5 -35.9 19.3 29.1 96.5 7 7 A A H > S+ 0 0 73 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.887 107.8 47.7 -65.2 -40.3 18.5 29.1 100.2 8 8 A R H > S+ 0 0 121 2,-0.2 4,-2.0 -3,-0.2 -2,-0.2 0.905 113.6 46.7 -67.1 -42.7 21.1 26.4 100.9 9 9 A I H X S+ 0 0 0 -4,-1.9 4,-1.1 2,-0.2 -2,-0.2 0.915 108.7 57.0 -64.1 -42.7 23.7 28.3 98.9 10 10 A H H >< S+ 0 0 65 -4,-2.7 3,-0.8 1,-0.2 4,-0.4 0.925 106.9 48.7 -49.7 -47.7 22.7 31.5 100.7 11 11 A W H >< S+ 0 0 168 -4,-2.0 3,-1.8 1,-0.2 -1,-0.2 0.922 105.7 56.6 -58.7 -47.3 23.5 29.8 104.0 12 12 A A H 3< S+ 0 0 15 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.676 98.5 64.7 -58.5 -21.0 26.9 28.6 102.7 13 13 A C T << S+ 0 0 0 -4,-1.1 2,-0.9 -3,-0.8 12,-0.4 0.604 75.8 98.6 -80.1 -16.1 27.6 32.4 102.0 14 14 A R < - 0 0 156 -3,-1.8 2,-0.2 -4,-0.4 7,-0.1 -0.665 63.7-168.0 -74.6 109.5 27.5 33.2 105.7 15 15 A R - 0 0 31 -2,-0.9 6,-0.1 2,-0.2 -2,-0.1 -0.531 35.0-120.4-101.5 159.7 31.2 33.2 106.6 16 16 A G S S+ 0 0 81 -2,-0.2 2,-0.4 4,-0.0 -1,-0.1 0.705 94.1 70.3 -67.2 -16.5 33.0 33.3 110.0 17 17 A M S >> S- 0 0 48 1,-0.1 4,-2.0 34,-0.0 3,-0.8 -0.879 73.0-139.3-115.7 136.2 34.7 36.6 109.0 18 18 A R H 3> S+ 0 0 192 -2,-0.4 4,-1.9 1,-0.2 5,-0.2 0.860 102.0 52.9 -53.4 -52.1 33.4 40.2 108.5 19 19 A E H 34 S+ 0 0 102 1,-0.2 -1,-0.2 2,-0.2 4,-0.2 0.723 112.9 46.7 -61.2 -24.6 35.4 41.1 105.3 20 20 A L H X>>S+ 0 0 1 -3,-0.8 4,-3.1 2,-0.2 3,-0.9 0.844 106.0 57.0 -84.5 -36.4 34.1 38.0 103.7 21 21 A D H 3X5S+ 0 0 43 -4,-2.0 4,-0.9 1,-0.3 -2,-0.2 0.920 107.5 48.9 -58.3 -41.9 30.5 38.5 104.7 22 22 A I H 3<5S+ 0 0 92 -4,-1.9 -1,-0.3 1,-0.2 -2,-0.2 0.589 120.2 38.4 -74.8 -14.6 30.4 41.9 103.1 23 23 A S H <>5S+ 0 0 23 -3,-0.9 4,-1.2 -4,-0.2 -2,-0.2 0.842 120.9 33.6 -99.9 -52.2 31.9 40.4 99.9 24 24 A I H X5S+ 0 0 0 -4,-3.1 4,-2.4 2,-0.2 -3,-0.2 0.920 114.5 52.5 -81.9 -49.1 30.4 37.0 99.3 25 25 A M H X S+ 0 0 32 0, 0.0 4,-2.7 0, 0.0 5,-0.3 0.882 111.8 55.6 -66.6 -38.0 26.0 40.5 98.6 27 27 A F H X>S+ 0 0 0 -4,-1.2 4,-3.2 2,-0.2 5,-0.7 0.944 111.9 44.4 -49.8 -54.4 27.6 39.1 95.5 28 28 A F H X5S+ 0 0 7 -4,-2.4 4,-1.5 3,-0.2 5,-0.4 0.956 114.1 48.3 -58.6 -49.8 25.3 36.0 95.9 29 29 A E H <5S+ 0 0 101 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.878 126.8 26.1 -64.5 -36.2 22.2 38.1 96.6 30 30 A H H <5S+ 0 0 121 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.701 133.6 27.2 -97.7 -21.9 22.7 40.4 93.6 31 31 A E H ><5S+ 0 0 27 -4,-3.2 3,-1.3 -5,-0.3 4,-0.5 0.664 89.2 87.5-118.2 -21.7 24.7 38.4 91.1 32 32 A Y G >< - 0 0 54 -2,-0.2 4,-2.3 1,-0.1 5,-0.1 -0.232 36.8-104.7 -59.5 165.5 25.9 30.7 83.8 37 37 A D H > S+ 0 0 89 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.858 124.6 53.1 -61.9 -35.7 25.2 27.3 85.1 38 38 A D H > S+ 0 0 87 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.921 108.4 49.8 -68.1 -40.8 28.9 26.5 84.9 39 39 A E H > S+ 0 0 51 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.864 108.7 53.0 -59.6 -43.5 29.6 29.7 86.9 40 40 A K H X S+ 0 0 22 -4,-2.3 4,-2.6 2,-0.2 -2,-0.2 0.937 108.7 49.2 -57.2 -49.1 27.1 28.7 89.6 41 41 A R H X S+ 0 0 110 -4,-2.1 4,-1.7 1,-0.2 -2,-0.2 0.909 113.0 47.6 -58.8 -44.8 28.6 25.2 90.0 42 42 A I H X S+ 0 0 10 -4,-2.1 4,-2.6 2,-0.2 -1,-0.2 0.900 109.4 52.8 -63.9 -42.1 32.1 26.8 90.4 43 43 A F H X S+ 0 0 0 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.928 106.3 54.0 -60.6 -42.9 30.8 29.4 92.9 44 44 A I H X S+ 0 0 14 -4,-2.6 4,-0.5 1,-0.2 -1,-0.2 0.922 109.9 47.5 -56.2 -42.8 29.4 26.6 95.0 45 45 A R H >< S+ 0 0 89 -4,-1.7 3,-1.2 1,-0.2 4,-0.4 0.884 105.7 58.0 -68.4 -38.8 32.8 24.9 95.0 46 46 A L H >< S+ 0 0 3 -4,-2.6 3,-2.0 1,-0.2 -1,-0.2 0.904 98.3 62.0 -52.9 -40.6 34.5 28.2 95.9 47 47 A L H 3< S+ 0 0 5 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.692 94.8 61.4 -64.0 -21.5 32.2 28.2 99.0 48 48 A E T << S+ 0 0 138 -3,-1.2 -1,-0.3 -4,-0.5 -2,-0.2 0.563 84.0 99.9 -77.0 -15.2 33.8 25.0 100.3 49 49 A C S < S- 0 0 26 -3,-2.0 2,-0.1 -4,-0.4 -3,-0.0 -0.333 85.9 -97.7 -66.0 155.7 37.3 26.7 100.5 50 50 A D >> - 0 0 111 1,-0.1 4,-2.1 -2,-0.0 3,-0.5 -0.463 28.4-116.1 -75.7 151.1 38.5 27.9 103.9 51 51 A D H 3> S+ 0 0 29 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.849 111.1 60.2 -56.1 -42.0 38.0 31.5 104.9 52 52 A P H 3> S+ 0 0 86 0, 0.0 4,-1.8 0, 0.0 -1,-0.2 0.913 111.1 42.6 -55.1 -39.5 41.8 32.3 105.2 53 53 A D H <> S+ 0 0 66 -3,-0.5 4,-2.8 2,-0.2 -2,-0.2 0.905 112.4 51.3 -70.8 -45.2 42.2 31.4 101.5 54 54 A L H X S+ 0 0 1 -4,-2.1 4,-2.7 2,-0.2 5,-0.2 0.887 111.5 49.3 -59.5 -38.7 39.0 33.2 100.3 55 55 A F H X S+ 0 0 61 -4,-2.7 4,-2.2 2,-0.2 6,-0.2 0.929 110.7 48.7 -70.3 -42.9 40.1 36.3 102.1 56 56 A N H <>S+ 0 0 61 -4,-1.8 5,-2.7 -5,-0.3 4,-0.4 0.924 114.3 47.0 -57.7 -45.6 43.6 36.2 100.6 57 57 A W H ><5S+ 0 0 31 -4,-2.8 3,-1.4 3,-0.2 -2,-0.2 0.948 111.6 49.0 -63.6 -46.3 42.1 35.6 97.1 58 58 A L H 3<5S+ 0 0 28 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.819 114.5 46.3 -64.4 -31.4 39.6 38.4 97.4 59 59 A M T 3<5S- 0 0 126 -4,-2.2 -1,-0.3 -5,-0.2 -2,-0.2 0.427 116.3-118.6 -84.1 -2.5 42.4 40.8 98.6 60 60 A N T < 5 + 0 0 106 -3,-1.4 2,-1.8 -4,-0.4 -3,-0.2 0.743 61.7 150.1 66.4 24.5 44.6 39.5 95.7 61 61 A H S > S- 0 0 58 1,-0.2 4,-2.6 2,-0.0 3,-0.6 -0.687 74.5-152.6 -80.0 112.5 42.5 26.1 90.3 67 67 A A H 3> S+ 0 0 69 -2,-0.7 4,-2.6 1,-0.3 -1,-0.2 0.800 93.2 56.2 -62.8 -29.8 41.8 28.4 87.3 68 68 A E H 3> S+ 0 0 88 2,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.907 110.0 45.7 -65.3 -41.7 38.0 28.0 87.7 69 69 A L H <> S+ 0 0 12 -3,-0.6 4,-2.8 2,-0.2 -2,-0.2 0.905 111.1 53.0 -67.1 -43.0 38.3 29.2 91.2 70 70 A E H X S+ 0 0 35 -4,-2.6 4,-2.0 1,-0.2 -2,-0.2 0.929 109.5 48.6 -55.2 -46.4 40.6 32.0 90.1 71 71 A M H X S+ 0 0 68 -4,-2.6 4,-1.7 2,-0.2 -1,-0.2 0.862 112.1 49.1 -62.0 -37.1 38.0 33.1 87.4 72 72 A M H X S+ 0 0 0 -4,-1.8 4,-2.4 2,-0.2 -2,-0.2 0.923 108.9 51.9 -71.4 -42.1 35.2 33.0 90.0 73 73 A V H X S+ 0 0 5 -4,-2.8 4,-1.9 1,-0.2 -2,-0.2 0.935 111.5 48.5 -57.4 -44.2 37.1 35.1 92.5 74 74 A R H X S+ 0 0 139 -4,-2.0 4,-2.3 -5,-0.2 -1,-0.2 0.835 107.7 53.8 -66.8 -35.2 37.8 37.6 89.8 75 75 A L H X S+ 0 0 27 -4,-1.7 4,-2.9 2,-0.2 5,-0.3 0.904 107.3 52.0 -66.5 -40.0 34.1 37.8 88.8 76 76 A I H X S+ 0 0 0 -4,-2.4 4,-2.5 2,-0.2 5,-0.2 0.917 111.0 48.2 -55.8 -44.8 33.2 38.5 92.4 77 77 A Q H X S+ 0 0 31 -4,-1.9 4,-2.0 2,-0.2 -2,-0.2 0.904 113.4 46.3 -63.9 -48.2 35.7 41.4 92.4 78 78 A T H X S+ 0 0 48 -4,-2.3 4,-1.7 2,-0.2 -2,-0.2 0.924 116.5 43.0 -59.9 -52.2 34.5 42.8 89.2 79 79 A R H X S+ 0 0 60 -4,-2.9 4,-1.3 1,-0.2 -2,-0.2 0.882 115.5 48.8 -63.6 -40.6 30.8 42.6 90.1 80 80 A N H X S+ 0 0 28 -4,-2.5 4,-2.2 -5,-0.3 -1,-0.2 0.884 108.6 54.5 -66.2 -39.3 31.3 43.9 93.6 81 81 A R H < S+ 0 0 164 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.886 111.7 43.9 -61.4 -42.4 33.4 46.8 92.4 82 82 A E H < S+ 0 0 146 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.735 117.4 44.3 -75.8 -24.9 30.7 47.9 90.0 83 83 A R H < S+ 0 0 82 -4,-1.3 -2,-0.2 -5,-0.1 -1,-0.2 0.795 100.0 82.8 -87.4 -33.6 27.8 47.6 92.4 84 84 A G S < S- 0 0 31 -4,-2.2 2,-0.3 1,-0.2 -3,-0.0 0.174 93.3 -56.2 -71.7-177.9 29.3 49.1 95.5 85 85 A P - 0 0 131 0, 0.0 2,-0.7 0, 0.0 -1,-0.2 -0.459 41.4-139.0 -63.8 124.3 29.7 52.7 96.7 86 86 A V - 0 0 148 -2,-0.3 2,-0.6 -3,-0.1 -4,-0.0 -0.789 28.3-156.4 -85.3 112.7 31.5 55.1 94.4 87 87 A A 0 0 90 -2,-0.7 -1,-0.0 1,-0.0 0, 0.0 -0.831 360.0 360.0-106.1 114.6 33.7 57.1 96.8 88 88 A I 0 0 247 -2,-0.6 -1,-0.0 0, 0.0 0, 0.0 -0.183 360.0 360.0 -66.8 360.0 35.0 60.7 96.2