==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE RECEPTOR 26-OCT-04 1XUT . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.G.HYMOWITZ,D.R.PATEL,H.J.WALLWEBER,S.RUNYON,M.YAN,J.YIN, . 46 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3928.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 45.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 10.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 64 A G 0 0 135 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -89.5 2.6 14.7 -0.1 2 65 A S - 0 0 76 2,-0.1 0, 0.0 1,-0.1 0, 0.0 -0.137 360.0-107.4 -70.4 171.3 4.0 11.5 -1.5 3 66 A P S > S+ 0 0 67 0, 0.0 2,-1.5 0, 0.0 3,-0.7 0.377 82.3 119.2 -82.0 4.8 6.6 11.4 -4.4 4 67 A W T 3 + 0 0 125 1,-0.2 -2,-0.1 2,-0.1 14,-0.0 -0.564 39.7 95.1 -75.3 90.4 3.8 10.0 -6.7 5 68 A S T 3 + 0 0 107 -2,-1.5 -1,-0.2 3,-0.0 -3,-0.0 0.454 68.6 61.2-145.6 -33.8 3.8 12.8 -9.3 6 69 A L S < S+ 0 0 117 -3,-0.7 17,-0.2 2,-0.1 -2,-0.1 0.140 79.2 127.3 -88.9 20.2 6.0 11.8 -12.2 7 70 A S - 0 0 58 15,-0.1 2,-0.4 9,-0.1 9,-0.1 -0.245 48.2-143.8 -73.2 165.4 3.8 8.8 -12.9 8 71 A a - 0 0 47 7,-0.2 2,-0.6 16,-0.1 7,-0.2 -0.991 6.5-152.9-135.5 142.0 2.4 8.0 -16.3 9 72 A R + 0 0 230 -2,-0.4 5,-0.1 1,-0.2 3,-0.0 -0.844 33.6 146.2-118.1 95.5 -1.0 6.5 -17.4 10 73 A K S S+ 0 0 188 -2,-0.6 2,-0.2 3,-0.1 -1,-0.2 0.768 72.8 20.9 -94.6 -32.7 -0.8 4.7 -20.8 11 74 A E S S- 0 0 114 2,-0.1 3,-0.1 1,-0.0 0, 0.0 -0.433 92.7 -90.9-120.0-165.4 -3.3 2.0 -20.0 12 75 A Q S S+ 0 0 202 1,-0.2 2,-0.4 -2,-0.2 -1,-0.0 0.868 109.9 42.4 -79.7 -39.4 -6.2 1.5 -17.5 13 76 A G S S+ 0 0 13 2,-0.0 13,-0.7 24,-0.0 14,-0.5 -0.929 72.5 130.8-115.2 133.5 -4.0 -0.2 -14.8 14 77 A K E -A 25 0A 42 -2,-0.4 2,-0.3 11,-0.2 11,-0.2 -0.923 26.5-158.5-160.1-177.9 -0.6 1.0 -13.7 15 78 A F E -A 24 0A 21 9,-2.2 9,-1.3 -2,-0.3 2,-0.6 -0.980 24.3-108.8-165.1 167.4 1.6 1.8 -10.8 16 79 A Y E -A 23 0A 29 -2,-0.3 2,-0.9 7,-0.2 7,-0.2 -0.931 22.4-151.0-112.9 116.4 4.7 3.7 -9.7 17 80 A D E >>> -A 22 0A 13 5,-1.3 4,-2.5 -2,-0.6 5,-0.9 -0.751 5.8-165.3 -88.9 104.9 7.8 1.7 -8.7 18 81 A H T 345S+ 0 0 125 -2,-0.9 3,-0.4 1,-0.3 -1,-0.2 0.953 87.9 55.0 -51.6 -60.3 9.7 3.7 -6.1 19 82 A L T 345S+ 0 0 139 1,-0.3 -1,-0.3 2,-0.1 -2,-0.1 0.775 118.3 38.4 -46.8 -28.3 13.0 1.7 -6.4 20 83 A L T <45S- 0 0 86 -3,-0.8 -1,-0.3 2,-0.2 -2,-0.2 0.732 94.4-146.9 -94.1 -28.1 12.8 2.5 -10.1 21 84 A R T <5 + 0 0 179 -4,-2.5 2,-0.2 -3,-0.4 -3,-0.2 0.623 67.3 97.8 69.1 12.3 11.5 6.0 -9.7 22 85 A D E S+ 0 0 28 -14,-0.5 3,-1.0 1,-0.2 -13,-0.1 0.811 105.9 54.5 -74.8 -31.2 -0.6 -5.8 -17.2 28 91 A S T 3 S+ 0 0 98 1,-0.2 -1,-0.2 0, 0.0 -2,-0.1 0.750 113.5 42.2 -73.6 -24.8 2.8 -5.8 -18.9 29 92 A I T > S+ 0 0 46 -4,-0.1 3,-1.7 2,-0.0 -1,-0.2 0.010 80.6 152.8-110.2 26.5 4.4 -7.6 -16.0 30 93 A c T < S+ 0 0 44 -3,-1.0 -3,-0.1 1,-0.3 12,-0.1 -0.387 71.4 17.3 -60.8 123.9 1.5 -10.0 -15.4 31 94 A G T 3 S+ 0 0 62 10,-0.6 -1,-0.3 -2,-0.2 -4,-0.1 -0.010 129.1 51.1 103.4 -28.6 2.9 -13.2 -13.8 32 95 A Q S < S+ 0 0 179 -3,-1.7 -2,-0.1 2,-0.0 0, 0.0 -0.426 83.1 112.5-138.9 60.1 6.2 -11.6 -12.7 33 96 A H - 0 0 17 8,-0.2 -2,-0.1 1,-0.2 -7,-0.1 -0.925 65.5 -96.7-132.1 157.1 5.2 -8.4 -10.9 34 97 A P - 0 0 44 0, 0.0 3,-0.4 0, 0.0 -1,-0.2 0.160 49.0 -90.4 -58.4-176.6 5.5 -7.2 -7.2 35 98 A K S > S+ 0 0 156 1,-0.2 3,-2.4 2,-0.2 4,-0.3 0.840 122.4 67.1 -68.7 -34.1 2.6 -7.3 -4.7 36 99 A Q G > S+ 0 0 59 1,-0.3 3,-0.6 2,-0.2 -1,-0.2 0.858 103.1 45.8 -54.8 -37.5 1.4 -3.9 -5.8 37 100 A b G >> S+ 0 0 0 -3,-0.4 3,-1.3 1,-0.2 4,-1.1 0.211 83.3 102.1 -90.9 14.9 0.5 -5.3 -9.2 38 101 A A G <4 + 0 0 6 -3,-2.4 7,-0.6 1,-0.3 4,-0.4 0.771 67.7 69.2 -68.2 -25.9 -1.2 -8.3 -7.6 39 102 A Y G <4 S+ 0 0 88 -3,-0.6 -1,-0.3 -4,-0.3 -2,-0.1 0.606 103.5 45.9 -68.2 -10.8 -4.6 -6.7 -8.2 40 103 A F T <4 S+ 0 0 68 -3,-1.3 2,-0.4 1,-0.1 6,-0.3 0.900 132.2 0.3 -94.6 -69.2 -4.0 -7.3 -11.9 41 104 A c S < S+ 0 0 29 -4,-1.1 -10,-0.6 5,-0.2 2,-0.3 -0.692 110.0 71.8-127.0 79.5 -2.7 -10.9 -12.4 42 105 A E S > S- 0 0 60 -4,-0.4 3,-1.7 -2,-0.4 4,-0.1 -0.932 98.9 -61.0-166.3-173.4 -2.4 -12.6 -9.0 43 106 A N T 3 S+ 0 0 139 1,-0.3 -4,-0.1 -2,-0.3 -5,-0.0 0.803 123.0 68.8 -53.7 -30.8 -4.3 -14.2 -6.1 44 107 A K T 3 S- 0 0 129 -6,-0.3 -1,-0.3 1,-0.0 -5,-0.2 0.857 133.0 -17.4 -57.9 -36.6 -5.9 -10.8 -5.5 45 108 A L < 0 0 132 -3,-1.7 -2,-0.1 -7,-0.6 -4,-0.1 0.515 360.0 360.0-132.4 -69.1 -7.8 -11.2 -8.8 46 109 A R 0 0 236 -8,-0.3 -5,-0.2 -6,-0.3 -7,-0.1 0.707 360.0 360.0-115.1 360.0 -6.5 -13.9 -11.2