==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HORMONE 23-OCT-10 2XV7 . COMPND 2 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR D; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR V.-M.LEPPANEN,M.JELTSCH,A.ANISIMOV,D.TVOROGOV,K.AHO,N.KALKKI . 104 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7602.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 68.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 30 28.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 91 A P 0 0 167 0, 0.0 5,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 84.1 -35.2 -65.4 15.0 2 92 A T > - 0 0 75 1,-0.1 4,-0.9 4,-0.0 0, 0.0 -0.038 360.0-109.7 -64.4 177.8 -33.3 -67.5 12.4 3 93 A F H > S+ 0 0 169 2,-0.2 4,-1.3 1,-0.1 -1,-0.1 0.787 115.5 53.2 -85.8 -30.8 -30.1 -66.3 10.8 4 94 A Y H > S+ 0 0 63 1,-0.2 4,-1.6 2,-0.2 5,-0.2 0.923 103.6 61.1 -68.8 -42.0 -31.5 -65.8 7.3 5 95 A D H > S+ 0 0 81 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.890 101.3 52.9 -43.6 -49.7 -34.2 -63.6 8.9 6 96 A I H X S+ 0 0 85 -4,-0.9 4,-2.7 1,-0.2 -1,-0.2 0.942 103.9 53.3 -59.6 -53.5 -31.6 -61.2 10.2 7 97 A E H X S+ 0 0 45 -4,-1.3 4,-3.0 1,-0.2 -1,-0.2 0.896 110.7 45.7 -48.9 -56.0 -29.8 -60.5 7.0 8 98 A T H X S+ 0 0 74 -4,-1.6 4,-2.6 2,-0.2 5,-0.2 0.958 114.7 47.1 -54.4 -55.5 -32.8 -59.5 5.1 9 99 A L H >X S+ 0 0 104 -4,-2.0 4,-2.0 2,-0.2 3,-0.7 0.975 111.2 52.4 -53.3 -64.8 -34.2 -57.3 7.9 10 100 A K H >X S+ 0 0 145 -4,-2.7 4,-2.3 1,-0.2 3,-1.0 0.875 109.9 49.1 -22.1 -72.0 -30.8 -55.7 8.3 11 101 A V H 3X S+ 0 0 83 -4,-3.0 4,-2.4 1,-0.3 -1,-0.2 0.854 108.6 53.0 -48.7 -44.0 -30.7 -54.9 4.5 12 102 A I H < S+ 0 0 83 -4,-2.8 3,-0.6 1,-0.2 -2,-0.2 0.785 110.4 52.3 -48.4 -32.9 -34.8 -47.3 5.3 17 107 A Q H >< S+ 0 0 104 -4,-2.5 3,-2.3 1,-0.2 -1,-0.2 0.950 102.4 57.0 -74.1 -44.3 -31.7 -45.5 6.4 18 108 A R H 3< S+ 0 0 180 -4,-2.4 -1,-0.2 -3,-0.3 -2,-0.2 0.511 104.4 55.6 -61.2 -8.0 -30.7 -44.4 2.9 19 109 A T T << S+ 0 0 51 -4,-0.6 36,-3.3 -3,-0.6 -1,-0.3 0.424 84.7 113.4-102.3 -1.0 -34.1 -42.7 2.5 20 110 A Q B < S-a 55 0A 62 -3,-2.3 36,-0.2 34,-0.3 33,-0.1 -0.377 83.6 -75.1 -80.7 151.3 -33.8 -40.6 5.6 21 111 A a S S+ 0 0 28 34,-2.0 33,-0.3 33,-0.2 -1,-0.2 -0.152 74.1 133.6 -41.8 111.7 -33.6 -36.8 5.6 22 112 A S E -B 53 0B 46 31,-2.7 31,-1.6 -3,-0.1 2,-0.7 -0.961 64.1 -85.1-152.6 165.8 -30.1 -35.7 4.4 23 113 A P E -B 52 0B 46 0, 0.0 2,-0.4 0, 0.0 29,-0.3 -0.702 52.7-178.5 -76.0 115.9 -28.4 -33.2 2.0 24 114 A R E -B 51 0B 80 27,-3.6 27,-2.3 -2,-0.7 72,-0.1 -0.924 33.2 -99.7-120.4 144.7 -28.4 -35.0 -1.3 25 115 A E E +B 50 0B 113 -2,-0.4 2,-0.3 25,-0.2 25,-0.3 -0.366 52.9 167.9 -67.6 134.7 -26.9 -33.7 -4.5 26 116 A T E -B 49 0B 48 23,-3.5 23,-1.9 -2,-0.1 2,-0.6 -0.924 37.9-103.3-145.9 170.9 -29.5 -32.3 -6.8 27 117 A A E -B 48 0B 77 -2,-0.3 2,-0.5 21,-0.2 21,-0.2 -0.861 33.1-169.8-103.5 119.9 -30.1 -30.2 -9.9 28 118 A V E -B 47 0B 12 19,-2.7 19,-1.7 -2,-0.6 2,-0.6 -0.924 18.8-138.0-113.3 129.3 -31.3 -26.6 -9.4 29 119 A E E > -B 46 0B 98 -2,-0.5 3,-0.6 17,-0.2 17,-0.2 -0.781 14.5-147.7 -86.7 120.1 -32.5 -24.4 -12.2 30 120 A V G > S+ 0 0 9 15,-2.0 3,-1.1 -2,-0.6 -1,-0.1 0.728 89.7 63.2 -66.0 -26.9 -31.0 -21.0 -11.6 31 121 A A G > S+ 0 0 41 14,-0.4 3,-1.8 1,-0.2 -1,-0.3 0.947 99.2 55.2 -61.1 -46.4 -33.8 -19.0 -13.0 32 122 A S G < S+ 0 0 92 -3,-0.6 -1,-0.2 1,-0.3 -2,-0.2 0.460 101.8 58.3 -72.1 -1.1 -36.2 -20.3 -10.4 33 123 A E G < S+ 0 0 83 -3,-1.1 -1,-0.3 -4,-0.2 2,-0.2 0.193 111.3 31.5-112.8 17.6 -34.0 -19.2 -7.6 34 124 A L S < S- 0 0 112 -3,-1.8 -3,-0.0 1,-0.1 0, 0.0 -0.824 96.7 -75.2-153.7-171.2 -33.9 -15.5 -8.5 35 125 A G - 0 0 76 -2,-0.2 -1,-0.1 1,-0.1 -4,-0.1 0.920 46.8-172.3 -64.8 -50.1 -35.7 -12.5 -10.1 36 126 A K > + 0 0 64 1,-0.1 3,-0.6 -6,-0.1 -1,-0.1 0.832 16.6 176.8 62.5 40.4 -35.3 -13.6 -13.7 37 127 A S G > + 0 0 69 1,-0.2 3,-1.5 2,-0.1 -1,-0.1 -0.313 52.4 7.0 -78.3 157.7 -36.6 -10.4 -15.3 38 128 A T G 3 S- 0 0 136 1,-0.3 -1,-0.2 -2,-0.0 -2,-0.1 0.704 120.8 -69.3 47.3 33.7 -36.8 -9.6 -19.0 39 129 A N G < S+ 0 0 60 -3,-0.6 2,-1.0 1,-0.2 41,-0.6 0.858 70.6 172.5 58.5 40.6 -35.8 -13.0 -20.3 40 130 A T B < -C 79 0C 68 -3,-1.5 39,-0.2 39,-0.2 -1,-0.2 -0.747 24.3-151.7 -79.0 105.5 -32.2 -12.9 -19.1 41 131 A F - 0 0 112 37,-2.5 2,-0.3 -2,-1.0 37,-0.2 0.002 8.5-140.5 -70.3 173.9 -31.1 -16.5 -19.8 42 132 A F - 0 0 32 35,-0.2 35,-0.2 33,-0.0 -11,-0.1 -0.992 10.8-134.9-132.7 147.9 -28.6 -18.8 -18.3 43 133 A K B S+D 76 0D 112 33,-2.0 33,-2.6 1,-0.4 -2,-0.0 -0.911 101.6 25.6-144.6 120.0 -26.2 -21.3 -19.8 44 134 A P S S- 0 0 74 0, 0.0 -1,-0.4 0, 0.0 32,-0.1 0.642 88.9-154.2 -65.2 159.9 -26.0 -23.8 -18.6 45 135 A P S S+ 0 0 76 0, 0.0 -15,-2.0 0, 0.0 -14,-0.4 0.764 71.6 44.2 -71.7 -28.1 -29.6 -23.3 -17.2 46 136 A b E -B 29 0B 53 -17,-0.2 2,-0.3 -16,-0.1 -17,-0.2 -0.713 61.9-160.3-125.6 171.9 -28.9 -25.6 -14.2 47 137 A V E -B 28 0B 15 -19,-1.7 -19,-2.7 -2,-0.2 2,-0.8 -0.972 24.1-115.9-152.5 146.6 -26.3 -26.4 -11.5 48 138 A N E +B 27 0B 91 -2,-0.3 2,-0.3 -21,-0.2 -21,-0.2 -0.820 47.5 150.4 -97.0 104.6 -25.4 -29.2 -9.2 49 139 A V E -B 26 0B 1 -23,-1.9 -23,-3.5 -2,-0.8 2,-0.3 -0.867 47.7 -99.3-124.6 165.7 -25.8 -28.3 -5.5 50 140 A F E +B 25 0B 84 -2,-0.3 46,-2.4 -25,-0.3 2,-0.3 -0.648 44.2 174.1 -83.5 137.1 -26.6 -30.2 -2.4 51 141 A R E -B 24 0B 34 -27,-2.3 -27,-3.6 -2,-0.3 2,-0.2 -0.935 31.9 -98.2-141.1 161.0 -30.2 -29.9 -1.1 52 142 A c E +B 23 0B 29 -2,-0.3 2,-0.3 -29,-0.3 13,-0.1 -0.558 53.7 131.6 -83.8 143.7 -32.2 -31.4 1.6 53 143 A G E +B 22 0B 19 -31,-1.6 -31,-2.7 -2,-0.2 2,-0.2 -0.971 12.5 90.3-172.4 173.5 -34.5 -34.3 1.1 54 144 A G - 0 0 36 -2,-0.3 9,-0.3 -33,-0.3 -34,-0.3 -0.443 66.0 -54.4 116.7 173.2 -35.7 -37.7 2.3 55 145 A b B -a 20 0A 71 -36,-3.3 -34,-2.0 -2,-0.2 2,-0.3 -0.295 39.6-139.1 -87.1 166.4 -38.2 -39.2 4.6 56 146 A d - 0 0 23 5,-0.2 7,-0.0 -36,-0.2 -1,-0.0 -0.887 20.0-122.0-122.8 154.3 -39.0 -38.5 8.3 57 147 A N S S+ 0 0 122 -2,-0.3 2,-0.2 2,-0.0 -1,-0.1 0.951 99.4 40.3 -58.5 -52.7 -39.9 -40.9 11.1 58 148 A E S > S- 0 0 130 1,-0.1 3,-0.5 -3,-0.1 -2,-0.1 -0.621 84.7-125.4 -96.4 160.0 -43.2 -39.2 11.9 59 149 A E T 3 S+ 0 0 180 -2,-0.2 -1,-0.1 1,-0.2 -3,-0.1 0.887 103.4 58.6 -73.7 -41.4 -45.6 -37.8 9.2 60 150 A S T 3 S+ 0 0 76 44,-0.0 44,-0.2 2,-0.0 -1,-0.2 0.643 91.8 92.9 -64.1 -14.0 -46.0 -34.2 10.4 61 151 A L < - 0 0 51 -3,-0.5 2,-0.3 42,-0.1 -5,-0.2 -0.510 56.4-165.9 -88.9 151.3 -42.2 -33.7 10.0 62 152 A I E - E 0 102D 96 40,-2.1 40,-2.2 -2,-0.2 2,-0.8 -0.954 30.4-107.4-133.2 150.3 -40.4 -32.4 7.0 63 153 A a E + E 0 101D 21 -9,-0.3 2,-0.4 -2,-0.3 38,-0.2 -0.703 48.6 174.8 -78.8 113.2 -36.8 -32.4 5.9 64 154 A M E - E 0 100D 96 36,-2.5 36,-1.3 -2,-0.8 2,-0.3 -0.941 35.3-110.4-119.9 143.7 -35.7 -28.7 6.3 65 155 A N E - E 0 99D 44 -2,-0.4 34,-0.3 34,-0.2 3,-0.1 -0.541 26.9-177.2 -67.4 131.2 -32.3 -27.2 5.9 66 156 A T E S+ 0 0 90 32,-2.1 2,-0.3 1,-0.3 33,-0.2 0.583 73.9 19.1-101.4 -18.2 -30.9 -26.1 9.3 67 157 A S E - E 0 98D 45 31,-1.2 31,-1.9 2,-0.0 30,-1.7 -0.990 66.9-175.1-147.5 151.7 -27.7 -24.6 7.7 68 158 A T E - E 0 96D 44 -2,-0.3 28,-0.3 28,-0.3 2,-0.2 -0.990 7.9-164.8-148.9 136.5 -26.7 -23.5 4.2 69 159 A S E - E 0 95D 49 26,-3.6 26,-2.4 -2,-0.3 2,-0.5 -0.625 24.4-122.4-107.2 176.1 -23.6 -22.2 2.5 70 160 A Y E - E 0 94D 133 24,-0.3 24,-0.2 -2,-0.2 2,-0.1 -0.853 18.6-159.1-129.5 102.5 -23.5 -20.5 -0.9 71 161 A I E - E 0 93D 62 22,-1.7 22,-3.0 -2,-0.5 2,-0.5 -0.372 14.6-134.9 -70.6 152.1 -21.4 -21.8 -3.8 72 162 A S E - E 0 92D 55 20,-0.2 2,-0.5 -2,-0.1 20,-0.2 -0.933 22.5-171.1-108.2 132.7 -20.3 -19.6 -6.6 73 163 A K E - E 0 91D 59 18,-2.7 18,-2.2 -2,-0.5 2,-0.1 -0.966 21.7-128.3-134.6 116.6 -20.8 -21.0 -10.0 74 164 A Q E + E 0 90D 110 -2,-0.5 2,-0.3 16,-0.2 14,-0.1 -0.389 41.3 166.3 -63.8 130.5 -19.5 -19.5 -13.2 75 165 A L E - E 0 89D 6 14,-2.6 14,-2.7 -2,-0.1 2,-0.6 -0.950 37.4-110.1-143.2 163.0 -22.2 -19.2 -15.8 76 166 A F E -DE 43 88D 97 -33,-2.6 -33,-2.0 -2,-0.3 2,-0.7 -0.869 22.7-153.6 -98.5 124.9 -23.1 -17.5 -19.1 77 167 A E - 0 0 76 10,-1.2 2,-0.6 -2,-0.6 10,-0.5 -0.862 15.9-178.5 -96.2 110.1 -25.7 -14.8 -19.1 78 168 A I - 0 0 40 -2,-0.7 -37,-2.5 -37,-0.2 2,-0.9 -0.941 12.5-166.1-113.1 116.5 -27.4 -14.6 -22.5 79 169 A S B -C 40 0C 33 -2,-0.6 -39,-0.2 -39,-0.2 -40,-0.1 -0.795 26.4-146.2-100.5 92.5 -30.1 -11.9 -22.9 80 170 A V S S+ 0 0 41 -2,-0.9 2,-0.1 -41,-0.6 -2,-0.1 -0.931 80.4 52.4-123.4 129.6 -31.8 -12.9 -26.2 81 171 A P S S- 0 0 132 0, 0.0 -1,-0.4 0, 0.0 2,-0.0 0.580 117.2-100.2 -79.4 144.9 -32.8 -11.1 -27.9 82 172 A L + 0 0 125 -2,-0.1 2,-0.3 -3,-0.1 3,-0.3 -0.771 52.6 140.1-161.4 -41.1 -30.2 -10.0 -27.7 83 173 A T - 0 0 80 1,-0.2 -5,-0.0 -5,-0.1 -3,-0.0 -0.956 56.5 -18.4-157.2 161.5 -27.1 -8.0 -27.0 84 174 A S S S- 0 0 111 -2,-0.3 -1,-0.2 2,-0.0 -6,-0.0 0.286 89.6 -49.0-122.4 146.4 -24.3 -7.6 -26.6 85 175 A V - 0 0 97 -3,-0.3 2,-0.4 1,-0.1 -6,-0.2 0.604 46.0-113.8 69.1 138.8 -22.3 -10.6 -25.4 86 176 A P - 0 0 58 0, 0.0 2,-0.3 0, 0.0 -8,-0.2 -0.876 37.1-155.3 -92.9 133.5 -22.8 -13.2 -22.7 87 177 A E - 0 0 137 -10,-0.5 -10,-1.2 -2,-0.4 2,-1.0 -0.821 23.8-102.9-118.2 154.5 -20.2 -12.9 -19.9 88 178 A L E +E 76 0D 84 -2,-0.3 -12,-0.2 -12,-0.2 -14,-0.1 -0.628 48.8 179.0 -78.6 103.2 -18.8 -15.4 -17.4 89 179 A V E -E 75 0D 40 -14,-2.7 -14,-2.6 -2,-1.0 2,-0.9 -0.846 28.5-132.7-110.0 137.7 -20.5 -14.4 -14.2 90 180 A P E -E 74 0D 68 0, 0.0 2,-0.3 0, 0.0 -16,-0.2 -0.794 27.3-165.7 -89.0 107.1 -20.1 -16.1 -10.8 91 181 A V E -E 73 0D 18 -18,-2.2 -18,-2.7 -2,-0.9 2,-0.7 -0.734 16.4-130.3 -95.4 145.3 -23.6 -16.7 -9.4 92 182 A K E +E 72 0D 136 -2,-0.3 2,-0.4 -20,-0.2 -20,-0.2 -0.829 29.7 179.6 -98.9 115.5 -24.1 -17.6 -5.7 93 183 A V E -E 71 0D 8 -22,-3.0 -22,-1.7 -2,-0.7 2,-0.5 -0.946 32.9-101.8-125.3 138.5 -26.4 -20.6 -5.3 94 184 A A E -E 70 0D 12 -2,-0.4 2,-0.6 -24,-0.2 -24,-0.3 -0.407 27.5-168.1 -69.6 112.2 -27.4 -22.2 -2.0 95 185 A N E -E 69 0D 29 -26,-2.4 -26,-3.6 -2,-0.5 2,-0.5 -0.887 21.9-136.6 -92.4 117.7 -25.6 -25.4 -0.9 96 186 A H E +E 68 0D 24 -46,-2.4 -28,-0.3 -2,-0.6 3,-0.1 -0.655 26.6 175.7 -75.3 125.0 -27.5 -26.9 2.0 97 187 A T E + 0 0 74 -30,-1.7 2,-0.3 -2,-0.5 -29,-0.2 0.602 61.0 33.0-108.8 -14.6 -25.1 -28.1 4.7 98 188 A G E +E 67 0D 12 -31,-1.9 -32,-2.1 -76,-0.1 -31,-1.2 -0.999 59.3 177.6-144.0 148.0 -27.5 -29.2 7.4 99 189 A c E +E 65 0D 29 -2,-0.3 2,-0.3 -34,-0.3 -34,-0.2 -0.901 5.6 166.3-139.1 165.7 -30.9 -30.8 7.7 100 190 A K E -E 64 0D 37 -36,-1.3 -36,-2.5 -2,-0.3 2,-0.3 -0.871 42.7 -98.8-174.1 150.4 -33.4 -32.2 10.2 101 191 A d E +E 63 0D 36 -2,-0.3 -38,-0.2 -38,-0.2 -40,-0.1 -0.641 58.0 155.8 -77.3 133.5 -37.0 -33.2 10.3 102 192 A L E -E 62 0D 78 -40,-2.2 -40,-2.1 -2,-0.3 2,-0.3 -0.916 34.8 -62.9-151.5 170.8 -39.1 -30.4 11.6 103 193 A P 0 0 98 0, 0.0 -42,-0.1 0, 0.0 -43,-0.0 -0.901 360.0 360.0-107.0 140.2 -42.6 -28.7 11.8 104 194 A T 0 0 143 -2,-0.3 -43,-0.1 -44,-0.2 -44,-0.0 0.376 360.0 360.0 152.6 360.0 -44.2 -27.4 9.6