==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 07-JAN-11 2Y4Q . COMPND 2 MOLECULE: POLYCYSTIN-2; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.D.ALLEN,S.QAMAR,R.N.SANDFORD . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5475.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 69.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 51.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 714 A G 0 0 116 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -53.5 11.7 12.6 -6.4 2 715 A G - 0 0 74 2,-0.3 3,-0.1 0, 0.0 71,-0.0 0.650 360.0 -45.9-119.4 -76.4 13.4 9.2 -7.0 3 716 A S S S+ 0 0 79 1,-0.5 2,-0.3 66,-0.1 66,-0.1 0.580 115.2 16.1-130.6 -53.2 11.2 6.1 -7.0 4 717 A L - 0 0 27 64,-0.1 -1,-0.5 65,-0.1 2,-0.5 -0.945 66.9-129.6-130.5 151.0 8.8 6.2 -4.0 5 718 A K >> - 0 0 107 -2,-0.3 4,-1.4 1,-0.1 3,-0.9 -0.864 9.7-141.9-104.2 131.1 7.7 8.9 -1.6 6 719 A K H 3> S+ 0 0 119 -2,-0.5 4,-1.5 1,-0.3 -1,-0.1 0.778 102.9 63.7 -57.7 -26.7 7.8 8.5 2.1 7 720 A N H 3> S+ 0 0 110 2,-0.2 4,-1.3 1,-0.2 -1,-0.3 0.886 99.5 51.6 -65.7 -40.0 4.5 10.3 2.3 8 721 A T H X> S+ 0 0 18 -3,-0.9 4,-2.2 1,-0.2 3,-0.5 0.938 106.2 53.0 -62.2 -49.3 2.7 7.6 0.3 9 722 A V H 3X S+ 0 0 12 -4,-1.4 4,-3.6 1,-0.3 5,-0.2 0.860 103.9 57.9 -55.4 -37.7 3.9 4.8 2.6 10 723 A D H 3X S+ 0 0 111 -4,-1.5 4,-2.1 2,-0.2 -1,-0.3 0.891 107.9 46.7 -60.6 -40.0 2.5 6.8 5.5 11 724 A D H S+ 0 0 6 -4,-2.0 5,-2.2 1,-0.2 4,-0.7 0.869 105.9 52.6 -69.6 -37.5 -2.9 -1.2 6.7 17 730 A R H <5S+ 0 0 196 -4,-2.1 3,-0.2 3,-0.2 -1,-0.2 0.821 105.6 55.4 -67.4 -32.0 -2.6 -1.0 10.5 18 731 A Q H <5S+ 0 0 113 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.821 108.9 47.0 -70.7 -32.0 -6.3 -0.3 10.8 19 732 A G H <5S- 0 0 40 -4,-1.1 -1,-0.2 -5,-0.1 -2,-0.2 0.591 128.8 -93.9 -85.8 -11.0 -7.1 -3.5 8.9 20 733 A G T <5S- 0 0 55 -4,-0.7 -3,-0.2 -3,-0.2 39,-0.1 0.811 70.7 -60.5 101.3 41.4 -4.7 -5.6 10.9 21 734 A G S -A 56 0A 51 -2,-0.3 4,-3.0 32,-0.2 5,-0.5 -0.489 38.8 -97.1 -96.1 167.8 -7.1 -6.6 -0.1 25 738 A F H > S+ 0 0 21 30,-2.4 4,-1.9 1,-0.2 5,-0.2 0.876 124.3 47.0 -47.7 -46.3 -7.0 -4.3 -3.2 26 739 A D H > S+ 0 0 109 29,-0.3 4,-2.1 2,-0.2 -1,-0.2 0.906 115.6 42.5 -66.0 -46.4 -10.7 -3.3 -2.6 27 740 A E H > S+ 0 0 92 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.925 118.5 43.1 -69.8 -45.9 -10.4 -2.6 1.2 28 741 A L H X S+ 0 0 0 -4,-3.0 4,-2.2 2,-0.2 -2,-0.2 0.909 114.4 52.1 -66.3 -41.5 -7.1 -0.7 1.0 29 742 A R H X S+ 0 0 43 -4,-1.9 4,-3.9 -5,-0.5 5,-0.2 0.917 109.3 48.3 -61.4 -45.1 -8.2 1.2 -2.1 30 743 A Q H X S+ 0 0 112 -4,-2.1 4,-2.2 1,-0.2 -1,-0.2 0.919 114.2 46.8 -62.1 -41.2 -11.4 2.3 -0.4 31 744 A D H < S+ 0 0 54 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.823 116.6 45.8 -67.2 -31.2 -9.4 3.4 2.6 32 745 A L H >X>S+ 0 0 4 -4,-2.2 5,-2.3 2,-0.2 3,-1.1 0.880 110.4 51.6 -77.7 -42.7 -7.0 5.1 0.2 33 746 A K H ><5S+ 0 0 122 -4,-3.9 3,-1.2 1,-0.3 -2,-0.2 0.887 104.3 57.6 -63.2 -38.9 -9.7 6.7 -1.9 34 747 A G T 3<5S+ 0 0 72 -4,-2.2 -1,-0.3 1,-0.3 -2,-0.2 0.634 105.6 52.6 -67.0 -11.9 -11.3 8.2 1.2 35 748 A K T <45S- 0 0 83 -3,-1.1 -1,-0.3 -4,-0.2 -2,-0.2 0.549 128.0 -95.3 -98.5 -11.4 -8.0 9.9 1.9 36 749 A G T <<5S+ 0 0 65 -3,-1.2 2,-0.3 -4,-0.6 -3,-0.2 0.453 74.7 145.9 110.5 4.2 -7.7 11.5 -1.5 37 750 A H < - 0 0 25 -5,-2.3 -1,-0.3 -8,-0.1 2,-0.1 -0.588 45.4-127.8 -78.1 132.2 -5.5 8.8 -3.2 38 751 A T > - 0 0 89 -2,-0.3 4,-2.5 1,-0.1 5,-0.2 -0.448 14.6-121.3 -78.6 151.9 -6.2 8.3 -6.9 39 752 A D H > S+ 0 0 65 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.878 113.4 54.8 -58.5 -39.7 -6.9 4.9 -8.3 40 753 A A H > S+ 0 0 78 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.933 110.2 44.7 -60.3 -48.0 -4.0 5.3 -10.7 41 754 A E H > S+ 0 0 86 1,-0.2 4,-2.3 2,-0.2 -2,-0.2 0.905 116.1 47.1 -63.3 -42.8 -1.6 6.0 -7.8 42 755 A I H X S+ 0 0 1 -4,-2.5 4,-3.1 1,-0.2 5,-0.2 0.892 111.0 51.5 -66.3 -41.2 -3.0 3.2 -5.7 43 756 A E H X S+ 0 0 90 -4,-3.0 4,-2.9 -5,-0.2 5,-0.3 0.869 110.3 49.6 -64.9 -36.6 -2.9 0.7 -8.6 44 757 A A H X S+ 0 0 44 -4,-2.0 4,-3.2 2,-0.2 -2,-0.2 0.955 115.3 42.3 -66.6 -50.1 0.8 1.6 -9.3 45 758 A I H X S+ 0 0 11 -4,-2.3 4,-2.3 2,-0.2 5,-0.3 0.920 118.7 46.1 -61.3 -45.7 1.8 1.1 -5.6 46 759 A F H X S+ 0 0 0 -4,-3.1 4,-3.0 2,-0.2 -2,-0.2 0.908 117.2 42.7 -65.7 -42.7 -0.4 -2.0 -5.4 47 760 A T H < S+ 0 0 72 -4,-2.9 -2,-0.2 -5,-0.2 -1,-0.2 0.918 113.2 53.7 -68.5 -44.2 0.9 -3.5 -8.6 48 761 A K H < S+ 0 0 100 -4,-3.2 -2,-0.2 -5,-0.3 -1,-0.2 0.907 122.7 27.4 -56.6 -47.7 4.5 -2.5 -7.8 49 762 A Y H < S+ 0 0 16 -4,-2.3 2,-3.4 -5,-0.2 3,-0.3 0.839 102.9 80.7 -85.9 -37.2 4.4 -4.2 -4.5 50 763 A D >< + 0 0 11 -4,-3.0 3,-1.6 -5,-0.3 5,-0.2 -0.288 51.2 153.1 -69.5 62.3 1.9 -6.9 -5.2 51 764 A Q T 3 + 0 0 175 -2,-3.4 -1,-0.2 1,-0.3 -2,-0.1 0.781 68.3 59.8 -63.1 -27.0 4.5 -9.0 -7.0 52 765 A D T 3 S- 0 0 87 -3,-0.3 -1,-0.3 4,-0.2 -2,-0.1 0.604 99.4-139.5 -77.3 -11.3 2.5 -12.1 -6.1 53 766 A G < + 0 0 42 -3,-1.6 -2,-0.1 -6,-0.2 -3,-0.1 0.803 60.3 134.8 56.5 29.9 -0.4 -10.7 -8.1 54 767 A D S S- 0 0 71 2,-0.3 -1,-0.1 1,-0.0 3,-0.1 0.275 72.0-122.3 -91.0 10.6 -2.8 -12.0 -5.4 55 768 A Q S S+ 0 0 127 -5,-0.2 -30,-2.4 1,-0.2 2,-0.3 0.797 81.0 104.6 53.5 29.8 -4.7 -8.7 -5.4 56 769 A E E -A 24 0A 72 -32,-0.3 2,-0.5 -31,-0.1 -2,-0.3 -0.993 59.4-150.4-144.9 135.1 -3.8 -8.4 -1.7 57 770 A L E -A 23 0A 0 -34,-2.2 -34,-2.3 -2,-0.3 2,-0.2 -0.905 22.7-179.1-107.3 125.8 -1.3 -6.3 0.3 58 771 A T E > -A 22 0A 45 -2,-0.5 4,-2.6 -36,-0.2 3,-0.4 -0.718 46.9 -92.9-119.7 171.1 0.1 -7.7 3.5 59 772 A E H > S+ 0 0 112 -38,-1.7 4,-1.8 1,-0.2 -37,-0.1 0.808 125.4 56.8 -50.0 -32.6 2.5 -6.7 6.2 60 773 A H H > S+ 0 0 165 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.947 108.2 43.6 -66.2 -50.1 5.2 -8.5 4.3 61 774 A E H > S+ 0 0 23 -3,-0.4 4,-0.9 1,-0.2 -2,-0.2 0.890 114.2 51.2 -62.8 -40.4 4.6 -6.4 1.1 62 775 A H H >X S+ 0 0 4 -4,-2.6 4,-1.3 1,-0.2 3,-0.5 0.851 101.3 62.8 -65.6 -34.8 4.4 -3.2 3.1 63 776 A Q H 3X S+ 0 0 80 -4,-1.8 4,-1.9 -5,-0.3 3,-0.3 0.908 99.0 54.0 -56.8 -43.8 7.7 -4.0 4.8 64 777 A Q H 3X S+ 0 0 91 -4,-1.3 4,-3.7 1,-0.2 5,-0.3 0.819 99.8 65.1 -60.2 -31.3 9.5 -3.9 1.5 65 778 A M H