==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 29-JAN-05 1YP5 . COMPND 2 MOLECULE: MYOSIN-5 ISOFORM; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR S.GONFONI,P.KURSULA,R.SACCO,G.CESARENI,M.WILMANNS . 58 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3797.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 58.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 39.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 118 0, 0.0 27,-2.2 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 172.4 5.1 19.6 6.5 2 2 A M E -A 27 0A 64 56,-0.4 56,-1.7 25,-0.2 2,-0.3 -0.767 360.0-179.0 -99.8 141.8 6.1 16.4 4.8 3 3 A F E -AB 26 57A 32 23,-2.4 23,-2.6 -2,-0.4 2,-0.4 -0.974 17.8-136.5-136.4 149.1 7.8 13.4 6.6 4 4 A E E -AB 25 56A 51 52,-2.7 52,-2.5 -2,-0.3 2,-0.3 -0.877 25.4-113.0-110.3 136.6 9.1 10.0 5.5 5 5 A A E - B 0 55A 0 19,-2.3 18,-2.3 -2,-0.4 50,-0.2 -0.519 23.4-171.3 -66.8 127.4 8.6 6.7 7.3 6 6 A A S S+ 0 0 16 48,-2.9 2,-0.3 -2,-0.3 -1,-0.2 0.583 73.1 29.2 -91.0 -17.5 11.9 5.4 8.6 7 7 A Y S S- 0 0 145 47,-0.4 -1,-0.1 14,-0.1 2,-0.1 -0.980 92.4 -95.0-141.3 150.7 10.3 2.0 9.6 8 8 A D - 0 0 83 -2,-0.3 13,-0.2 13,-0.1 -2,-0.0 -0.431 33.9-169.9 -62.0 139.8 7.5 -0.2 8.4 9 9 A F B -F 20 0B 16 11,-2.9 11,-2.5 -2,-0.1 -1,-0.0 -0.860 7.8-171.2-134.2 93.4 4.2 0.4 10.3 10 10 A P - 0 0 95 0, 0.0 -1,-0.1 0, 0.0 11,-0.0 0.804 24.1-146.1 -57.8 -31.5 1.6 -2.3 9.5 11 11 A G + 0 0 13 7,-0.1 3,-0.3 8,-0.1 6,-0.2 0.913 44.7 147.2 68.2 46.9 -1.1 -0.4 11.4 12 12 A S + 0 0 109 1,-0.2 -1,-0.1 3,-0.0 -3,-0.0 0.501 48.0 83.9 -93.8 -8.0 -3.0 -3.4 12.6 13 13 A G S S- 0 0 64 1,-0.2 -1,-0.2 2,-0.0 -2,-0.0 0.849 106.0 -15.6 -64.9 -41.2 -4.1 -1.9 16.0 14 14 A S > - 0 0 46 -3,-0.3 3,-1.4 1,-0.0 -1,-0.2 -0.982 61.0-108.5-158.7 163.6 -7.2 -0.2 14.6 15 15 A P T 3 S+ 0 0 134 0, 0.0 -2,-0.0 0, 0.0 -3,-0.0 0.609 112.9 68.8 -71.3 -11.1 -8.9 1.0 11.3 16 16 A S T 3 S+ 0 0 60 32,-0.1 33,-2.3 2,-0.1 2,-0.2 0.429 83.5 92.1 -84.3 -5.4 -8.0 4.6 12.4 17 17 A E B < S-c 49 0A 25 -3,-1.4 33,-0.2 31,-0.3 30,-0.1 -0.570 74.0-131.8 -89.8 158.3 -4.3 3.9 11.9 18 18 A L - 0 0 2 31,-2.2 -7,-0.1 -2,-0.2 30,-0.1 -0.940 19.1-136.2-114.9 107.4 -2.5 4.6 8.6 19 19 A P - 0 0 57 0, 0.0 2,-0.4 0, 0.0 -8,-0.1 -0.361 27.1-174.2 -62.7 138.8 -0.3 1.8 7.3 20 20 A L B -F 9 0B 8 -11,-2.5 -11,-2.9 -2,-0.0 2,-0.3 -0.993 19.6-149.9-134.9 143.8 3.1 2.8 6.0 21 21 A K > - 0 0 132 -2,-0.4 3,-2.3 -13,-0.2 -16,-0.3 -0.841 46.5 -88.8 -96.7 148.3 6.0 1.2 4.4 22 22 A K T 3 S+ 0 0 120 -2,-0.3 -16,-0.2 1,-0.3 3,-0.1 -0.381 118.4 36.3 -51.3 130.4 9.5 2.5 4.9 23 23 A G T 3 S+ 0 0 35 -18,-2.3 2,-0.5 1,-0.3 -1,-0.3 0.208 81.0 133.9 103.9 -13.4 10.0 5.2 2.3 24 24 A D < - 0 0 65 -3,-2.3 -19,-2.3 -19,-0.1 2,-0.4 -0.616 43.2-153.1 -76.3 121.8 6.5 6.5 2.2 25 25 A V E +A 4 0A 34 -2,-0.5 17,-0.6 -21,-0.2 2,-0.3 -0.819 26.1 162.6 -91.7 129.6 6.4 10.4 2.3 26 26 A I E -AD 3 41A 0 -23,-2.6 -23,-2.4 -2,-0.4 2,-0.3 -0.879 40.0-100.6-136.9 167.4 3.2 11.8 3.8 27 27 A Y E -AD 2 40A 106 13,-2.7 13,-1.9 -2,-0.3 2,-0.4 -0.736 28.6-157.4 -86.3 140.4 1.8 15.1 5.3 28 28 A I E + D 0 39A 6 -27,-2.2 11,-0.2 -2,-0.3 3,-0.1 -0.997 17.4 171.1-119.0 127.3 1.7 15.4 9.1 29 29 A T E + 0 0 73 9,-2.1 2,-0.3 -2,-0.4 10,-0.1 0.698 65.0 18.0-104.4 -31.4 -0.7 18.0 10.5 30 30 A R E - D 0 38A 173 8,-0.7 8,-2.1 2,-0.0 2,-0.5 -0.995 52.7-158.2-146.6 139.9 -0.6 17.3 14.3 31 31 A E E - D 0 37A 108 -2,-0.3 6,-0.2 6,-0.2 -3,-0.0 -0.990 25.3-154.6-118.0 127.7 1.6 15.5 16.8 32 32 A E > - 0 0 77 4,-2.8 3,-2.0 -2,-0.5 4,-0.1 -0.640 28.3-116.5-106.7 155.5 -0.1 14.5 20.0 33 33 A P T 3 S+ 0 0 136 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.527 109.4 73.7 -65.7 -5.9 1.0 13.8 23.6 34 34 A S T 3 S- 0 0 83 2,-0.2 3,-0.1 0, 0.0 -3,-0.0 0.593 118.2-106.7 -76.4 -13.8 -0.1 10.2 23.1 35 35 A G S < S+ 0 0 42 -3,-2.0 17,-2.1 1,-0.4 18,-0.5 0.452 85.7 115.2 95.8 2.6 2.9 9.5 20.9 36 36 A W E - E 0 51A 78 15,-0.2 -4,-2.8 16,-0.1 -1,-0.4 -0.832 48.2-158.7-109.3 146.2 0.7 9.5 17.7 37 37 A S E -DE 31 50A 0 13,-2.8 13,-2.5 -2,-0.3 2,-0.7 -0.925 21.3-122.9-118.3 146.8 0.7 11.9 14.7 38 38 A L E -DE 30 49A 33 -8,-2.1 -9,-2.1 -2,-0.3 -8,-0.7 -0.818 38.3-175.9 -91.5 114.2 -2.1 12.4 12.2 39 39 A G E -DE 28 48A 0 9,-2.7 9,-2.2 -2,-0.7 2,-0.3 -0.739 15.9-162.6-113.3 159.4 -0.9 11.7 8.7 40 40 A K E -DE 27 47A 82 -13,-1.9 -13,-2.7 -2,-0.3 7,-0.2 -0.999 26.7-114.6-141.3 134.7 -2.3 12.0 5.1 41 41 A L E > -D 26 0A 46 5,-2.7 3,-2.3 -2,-0.3 -15,-0.2 -0.357 33.5-114.0 -67.0 148.9 -1.1 10.4 1.9 42 42 A L T 3 S+ 0 0 88 -17,-0.6 -1,-0.1 1,-0.3 -16,-0.1 0.737 116.2 53.4 -61.7 -23.3 0.1 12.9 -0.7 43 43 A D T 3 S- 0 0 124 3,-0.1 -1,-0.3 1,-0.0 -2,-0.1 0.375 110.3-121.1 -89.9 4.1 -2.8 12.1 -3.1 44 44 A G S < S+ 0 0 51 -3,-2.3 -2,-0.1 2,-0.2 3,-0.1 0.577 77.4 123.5 69.7 13.0 -5.4 12.7 -0.4 45 45 A S S S+ 0 0 78 1,-0.2 2,-0.3 -5,-0.0 -1,-0.1 0.685 74.6 10.4 -82.6 -19.7 -6.7 9.2 -0.7 46 46 A K - 0 0 104 -5,-0.1 -5,-2.7 2,-0.0 2,-0.3 -0.990 56.9-176.3-157.6 147.3 -6.2 8.2 3.0 47 47 A E E + E 0 40A 104 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.976 21.5 125.9-143.4 158.7 -5.4 9.6 6.4 48 48 A G E - E 0 39A 5 -9,-2.2 -9,-2.7 -2,-0.3 -31,-0.3 -0.974 53.1 -48.8 170.5 178.3 -4.8 8.1 9.9 49 49 A W E +cE 17 38A 81 -33,-2.3 -31,-2.2 -2,-0.3 -11,-0.2 -0.535 44.8 173.1 -82.2 137.0 -2.6 7.8 12.9 50 50 A V E - E 0 37A 0 -13,-2.5 -13,-2.8 -2,-0.3 2,-0.3 -0.949 42.8 -90.7-133.6 153.8 1.1 6.8 12.7 51 51 A P E > - E 0 36A 17 0, 0.0 3,-1.6 0, 0.0 4,-0.4 -0.515 28.4-144.2 -68.5 125.6 3.8 6.7 15.5 52 52 A T G > S+ 0 0 37 -17,-2.1 3,-1.6 -2,-0.3 -16,-0.1 0.880 97.7 62.1 -54.2 -40.1 5.5 10.1 15.7 53 53 A A G 3 S+ 0 0 92 -18,-0.5 -1,-0.3 1,-0.3 -17,-0.1 0.631 96.9 58.7 -65.5 -16.0 8.8 8.3 16.5 54 54 A Y G < S+ 0 0 82 -3,-1.6 -48,-2.9 -48,-0.0 2,-0.5 0.554 88.9 91.5 -85.6 -11.5 8.8 6.6 13.0 55 55 A M E < -B 5 0A 21 -3,-1.6 -50,-0.2 -4,-0.4 -5,-0.0 -0.773 53.7-170.0-103.8 126.0 8.7 9.8 11.0 56 56 A K E -B 4 0A 89 -52,-2.5 -52,-2.7 -2,-0.5 -2,-0.0 -0.838 35.8 -91.1-113.0 145.3 11.8 11.7 9.7 57 57 A P E B 3 0A 113 0, 0.0 -54,-0.2 0, 0.0 -1,-0.1 -0.265 360.0 360.0 -51.2 137.5 11.9 15.1 8.2 58 58 A H 0 0 144 -56,-1.7 -56,-0.4 0, 0.0 -33,-0.0 -0.983 360.0 360.0-124.1 360.0 11.6 15.2 4.3